RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 PIGBOS1A0A0B4J2F0 54 aa8.11□□□□□ -1.11
CTDNEP1-212ENST00000576613 A0A1W2PPQ1 181 aa8.11□□□□□ -1.11
CTDNEP1-212ENST00000576613 EPM2AB3EWF7 344 aa8.11□□□□□ -1.11
CTDNEP1-212ENST00000576613 AKAIN1P0CW23 69 aa8.11□□□□□ -1.11
CTDNEP1-212ENST00000576613 HTN1P15515 57 aa8.11□□□□□ -1.11
CTDNEP1-212ENST00000576613 AZU1P20160 251 aa8.11□□□□□ -1.11
CTDNEP1-212ENST00000576613 TAS2R60P59551 318 aa8.11□□□□□ -1.11
CTDNEP1-212ENST00000576613 SRPXP78539 464 aa8.11□□□□□ -1.11
CTDNEP1-212ENST00000576613 THAP8Q8NA92 274 aa8.11□□□□□ -1.11
CTDNEP1-212ENST00000576613 ZNF738Q8NE65 137 aa8.11□□□□□ -1.11
CTDNEP1-212ENST00000576613 BPIFCQ8NFQ6 507 aa8.11□□□□□ -1.11
CTDNEP1-212ENST00000576613 OR10J6PQ8NGY7 276 aa8.11□□□□□ -1.11
CTDNEP1-212ENST00000576613 GNPNAT1Q96EK6 184 aaPredicted RBP8.11□□□□□ -1.11
CTDNEP1-212ENST00000576613 TMEM147Q9BVK8 224 aa8.11□□□□□ -1.11
CTDNEP1-212ENST00000576613 PPP1R14DQ9NXH3 145 aa8.11□□□□□ -1.11
CTDNEP1-212ENST00000576613 PRR13Q9NZ81 148 aa8.11□□□□□ -1.11
CTDNEP1-212ENST00000576613 PAIP2BQ9ULR5 123 aaKnown RBP8.11□□□□□ -1.11
CTDNEP1-212ENST00000576613 DMBT1Q9UGM3 2413 aaPredicted RBP8.11□□□□□ -1.11
CTDNEP1-212ENST00000576613 IGKV1OR2-108A0A075B7D4 117 aa8.1□□□□□ -1.11
CTDNEP1-212ENST00000576613 ADAP1O75689 374 aa8.1□□□□□ -1.11
CTDNEP1-212ENST00000576613 ANXA3P12429 323 aa8.1□□□□□ -1.11
CTDNEP1-212ENST00000576613 ORM2P19652 201 aa8.1□□□□□ -1.11
CTDNEP1-212ENST00000576613 KRTAP10-2P60368 255 aa8.1□□□□□ -1.11
CTDNEP1-212ENST00000576613 RHOBP62745 196 aa8.1□□□□□ -1.11
CTDNEP1-212ENST00000576613 FGL1Q08830 312 aa8.1□□□□□ -1.11
CTDNEP1-212ENST00000576613 ZNF493Q6ZR52 646 aa8.1□□□□□ -1.11
CTDNEP1-212ENST00000576613 LYZL2Q7Z4W2 148 aa8.1□□□□□ -1.11
CTDNEP1-212ENST00000576613 TMEM144Q7Z5S9 345 aa8.1□□□□□ -1.11
CTDNEP1-212ENST00000576613 RNF182Q8N6D2 247 aa8.1□□□□□ -1.11
CTDNEP1-212ENST00000576613 ZNF503Q96F45 646 aa8.1□□□□□ -1.11
CTDNEP1-212ENST00000576613 SCGB3A2Q96PL1 93 aa8.1□□□□□ -1.11
CTDNEP1-212ENST00000576613 UPK3BQ9BT76 320 aa8.1□□□□□ -1.11
CTDNEP1-212ENST00000576613 KRTAP1-5Q9BYS1 174 aa8.1□□□□□ -1.11
CTDNEP1-212ENST00000576613 SLC25A39Q9BZJ4 359 aaPredicted RBP8.1□□□□□ -1.11
CTDNEP1-212ENST00000576613 HERC1Q15751 4861 aa8.09□□□□□ -1.11
CTDNEP1-212ENST00000576613 TRAV26-1A0A087WT03 109 aa8.09□□□□□ -1.11
CTDNEP1-212ENST00000576613 RGS5O15539 181 aa8.09□□□□□ -1.11
CTDNEP1-212ENST00000576613 M6PRP20645 277 aa8.09□□□□□ -1.11
CTDNEP1-212ENST00000576613 RPP30P78346 268 aaKnown RBP8.09□□□□□ -1.11
CTDNEP1-212ENST00000576613 HIST1H1AQ02539 215 aaPredicted RBP8.09□□□□□ -1.11
CTDNEP1-212ENST00000576613 OR5I1Q13606 314 aa8.09□□□□□ -1.11
CTDNEP1-212ENST00000576613 IGFL4Q6B9Z1 124 aa8.09□□□□□ -1.11
CTDNEP1-212ENST00000576613 CLVS1Q8IUQ0 354 aaPredicted RBP8.09□□□□□ -1.11
CTDNEP1-212ENST00000576613 OR51S1Q8NGJ8 323 aa8.09□□□□□ -1.11
CTDNEP1-212ENST00000576613 TMEM263Q8WUH6 116 aaKnown RBP8.09□□□□□ -1.11
CTDNEP1-212ENST00000576613 SMIM4Q8WVI0 70 aa8.09□□□□□ -1.11
CTDNEP1-212ENST00000576613 C17orf77Q96MU5 243 aa8.09□□□□□ -1.11
CTDNEP1-212ENST00000576613 PTTG2Q9NZH5 202 aa8.09□□□□□ -1.11
CTDNEP1-212ENST00000576613 SCP2D1Q9UJQ7 156 aa8.09□□□□□ -1.11
CTDNEP1-212ENST00000576613 DNAH5Q8TE73 4624 aa8.09□□□□□ -1.12
CTDNEP1-212ENST00000576613 TRAV8-2A0A0B4J237 113 aa8.08□□□□□ -1.12
CTDNEP1-212ENST00000576613 IAPPP10997 89 aa8.08□□□□□ -1.12
CTDNEP1-212ENST00000576613 RPL7P18124 248 aaKnown RBP8.08□□□□□ -1.12
CTDNEP1-212ENST00000576613 RNASE8Q8TDE3 154 aaKnown RBP8.08□□□□□ -1.12
CTDNEP1-212ENST00000576613 RXFP4Q8TDU9 374 aa8.08□□□□□ -1.12
CTDNEP1-212ENST00000576613 UHRF2Q96PU4 802 aa8.08□□□□□ -1.12
CTDNEP1-212ENST00000576613 CIB3Q96Q77 187 aaPredicted RBP8.08□□□□□ -1.12
CTDNEP1-212ENST00000576613 NOP10Q9NPE3 64 aaKnown RBP8.08□□□□□ -1.12
CTDNEP1-212ENST00000576613 DUXBA0A1W2PPF3 345 aa8.07□□□□□ -1.12
CTDNEP1-212ENST00000576613 H7BYZ3 331 aa8.07□□□□□ -1.12
CTDNEP1-212ENST00000576613 MED6O75586 246 aa8.07□□□□□ -1.12
CTDNEP1-212ENST00000576613 INAFM2P0DMQ5 153 aa8.07□□□□□ -1.12
CTDNEP1-212ENST00000576613 CDKN1BP46527 198 aa8.07□□□□□ -1.12
CTDNEP1-212ENST00000576613 RAP2BP61225 183 aa8.07□□□□□ -1.12
CTDNEP1-212ENST00000576613 DLK1P80370 383 aa8.07□□□□□ -1.12
CTDNEP1-212ENST00000576613 AKR1C1Q04828 323 aa8.07□□□□□ -1.12
CTDNEP1-212ENST00000576613 OR8A1Q8NGG7 326 aa8.07□□□□□ -1.12
CTDNEP1-212ENST00000576613 LRRC20Q8TCA0 184 aa8.07□□□□□ -1.12
CTDNEP1-212ENST00000576613 MRPS16Q9Y3D3 137 aaKnown RBP8.07□□□□□ -1.12
CTDNEP1-212ENST00000576613 H3BNG1 76 aa8.06□□□□□ -1.12
CTDNEP1-212ENST00000576613 H3BRN7 92 aa8.06□□□□□ -1.12
CTDNEP1-212ENST00000576613 ZNF701M0R085 212 aaPredicted RBP8.06□□□□□ -1.12
CTDNEP1-212ENST00000576613 EREGO14944 169 aa8.06□□□□□ -1.12
CTDNEP1-212ENST00000576613 CTDSPLO15194 276 aa8.06□□□□□ -1.12
CTDNEP1-212ENST00000576613 GATA2P23769 480 aaPredicted RBP8.06□□□□□ -1.12
CTDNEP1-212ENST00000576613 CTF1Q16619 201 aa8.06□□□□□ -1.12
CTDNEP1-212ENST00000576613 S100A7AQ86SG5 101 aa8.06□□□□□ -1.12
CTDNEP1-212ENST00000576613 CCDC28AQ8IWP9 274 aa8.06□□□□□ -1.12
CTDNEP1-212ENST00000576613 C20orf144Q9BQM9 153 aa8.06□□□□□ -1.12
CTDNEP1-212ENST00000576613 SHANK2-AS3Q9BTD1 123 aa8.06□□□□□ -1.12
CTDNEP1-212ENST00000576613 MIXL1Q9H2W2 232 aa8.06□□□□□ -1.12
CTDNEP1-212ENST00000576613 MCUBQ9NWR8 336 aa8.06□□□□□ -1.12
CTDNEP1-212ENST00000576613 PGPEP1Q9NXJ5 209 aa8.06□□□□□ -1.12
CTDNEP1-212ENST00000576613 ZNF586Q9NXT0 402 aa8.06□□□□□ -1.12
CTDNEP1-212ENST00000576613 RABL2AQ9UBK7 228 aaPredicted RBP8.06□□□□□ -1.12
CTDNEP1-212ENST00000576613 RABL2BQ9UNT1 228 aa8.06□□□□□ -1.12
CTDNEP1-212ENST00000576613 HIGD1AQ9Y241 93 aa8.06□□□□□ -1.12
CTDNEP1-212ENST00000576613 A0A0J9YY99 117 aa8.05□□□□□ -1.12
CTDNEP1-212ENST00000576613 ANKRD20A5PA0PJZ0 165 aa8.05□□□□□ -1.12
CTDNEP1-212ENST00000576613 PRSS46E5RG02 174 aa8.05□□□□□ -1.12
CTDNEP1-212ENST00000576613 PITX3O75364 302 aa8.05□□□□□ -1.12
CTDNEP1-212ENST00000576613 RLN2P04090 185 aa8.05□□□□□ -1.12
CTDNEP1-212ENST00000576613 SLC25A6P12236 298 aa8.05□□□□□ -1.12
CTDNEP1-212ENST00000576613 CXCL3P19876 107 aa8.05□□□□□ -1.12
CTDNEP1-212ENST00000576613 IL18Q14116 193 aa8.05□□□□□ -1.12
CTDNEP1-212ENST00000576613 PSG3Q16557 428 aa8.05□□□□□ -1.12
CTDNEP1-212ENST00000576613 ESRGQ1W209 222 aa8.05□□□□□ -1.12
CTDNEP1-212ENST00000576613 RNF24Q9Y225 148 aa8.05□□□□□ -1.12
CTDNEP1-212ENST00000576613 A0A087X0K7 114 aa8.04□□□□□ -1.12
CTDNEP1-212ENST00000576613 SNURFLB1AK76 121 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms