RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 BCL2L11O43521 198 aa6.42□□□□□ -1.38
NUP88-211ENST00000575976 JTBO76095 146 aa6.42□□□□□ -1.38
NUP88-211ENST00000575976 S100A7P31151 101 aa6.42□□□□□ -1.38
NUP88-211ENST00000575976 TFPI2P48307 235 aa6.42□□□□□ -1.38
NUP88-211ENST00000575976 S100A7AQ86SG5 101 aa6.42□□□□□ -1.38
NUP88-211ENST00000575976 WFDC3Q8IUB2 231 aa6.42□□□□□ -1.38
NUP88-211ENST00000575976 OR8I2Q8N0Y5 310 aa6.42□□□□□ -1.38
NUP88-211ENST00000575976 GATAD1Q8WUU5 269 aa6.42□□□□□ -1.38
NUP88-211ENST00000575976 PFDN5Q99471 154 aa6.42□□□□□ -1.38
NUP88-211ENST00000575976 SPAG8Q99932 426 aaPredicted RBP6.42□□□□□ -1.38
NUP88-211ENST00000575976 SH3BGRL3Q9H299 93 aa6.42□□□□□ -1.38
NUP88-211ENST00000575976 AURKAIP1Q9NWT8 199 aaPredicted RBP6.42□□□□□ -1.38
NUP88-211ENST00000575976 SMAD5-AS1Q9Y6J3 95 aa6.42□□□□□ -1.38
NUP88-211ENST00000575976 TRAV5A0A0B4J249 113 aa6.41□□□□□ -1.38
NUP88-211ENST00000575976 HELTA6NFD8 242 aa6.41□□□□□ -1.38
NUP88-211ENST00000575976 PFDN1O60925 122 aa6.41□□□□□ -1.38
NUP88-211ENST00000575976 CD5P06127 495 aa6.41□□□□□ -1.38
NUP88-211ENST00000575976 CD7P09564 240 aa6.41□□□□□ -1.38
NUP88-211ENST00000575976 PAFAH1B2P68402 229 aa6.41□□□□□ -1.38
NUP88-211ENST00000575976 ACOT6Q3I5F7 207 aaPredicted RBP6.41□□□□□ -1.38
NUP88-211ENST00000575976 FAM78BQ5VT40 261 aa6.41□□□□□ -1.38
NUP88-211ENST00000575976 SPATA31B1PQ5VZV4 182 aa6.41□□□□□ -1.38
NUP88-211ENST00000575976 SIGLEC15Q6ZMC9 328 aa6.41□□□□□ -1.38
NUP88-211ENST00000575976 MIR17HGQ75NE6 70 aa6.41□□□□□ -1.38
NUP88-211ENST00000575976 C9orf62Q8N4C0 152 aa6.41□□□□□ -1.38
NUP88-211ENST00000575976 STXBP6Q8NFX7 210 aa6.41□□□□□ -1.38
NUP88-211ENST00000575976 OR2G3Q8NGZ4 309 aa6.41□□□□□ -1.38
NUP88-211ENST00000575976 GNPNAT1Q96EK6 184 aaPredicted RBP6.41□□□□□ -1.38
NUP88-211ENST00000575976 PSMG3Q9BT73 122 aaPredicted RBP6.41□□□□□ -1.38
NUP88-211ENST00000575976 ZNF471Q9BX82 626 aaPredicted RBP6.41□□□□□ -1.38
NUP88-211ENST00000575976 MS4A6AQ9H2W1 248 aa6.41□□□□□ -1.38
NUP88-211ENST00000575976 SEPSECSQ9HD40 501 aaKnown RBP6.41□□□□□ -1.38
NUP88-211ENST00000575976 PLA2G2EQ9NZK7 142 aa6.41□□□□□ -1.38
NUP88-211ENST00000575976 K7EQG2 157 aa6.4□□□□□ -1.38
NUP88-211ENST00000575976 DNASE2O00115 360 aaPredicted RBP6.4□□□□□ -1.38
NUP88-211ENST00000575976 MRPS12O15235 138 aaKnown RBP6.4□□□□□ -1.38
NUP88-211ENST00000575976 EIF3GO75821 320 aaKnown RBP eCLIP6.4□□□□□ -1.38
NUP88-211ENST00000575976 M6PRP20645 277 aa6.4□□□□□ -1.38
NUP88-211ENST00000575976 GALR1P47211 349 aa6.4□□□□□ -1.38
NUP88-211ENST00000575976 NKX2-5P52952 324 aaPredicted RBP6.4□□□□□ -1.38
NUP88-211ENST00000575976 RAB2AP61019 212 aa6.4□□□□□ -1.38
NUP88-211ENST00000575976 SERF2P84101 59 aa6.4□□□□□ -1.38
NUP88-211ENST00000575976 Q8N1Y9 231 aa6.4□□□□□ -1.38
NUP88-211ENST00000575976 FAM24BQ8N5W8 94 aa6.4□□□□□ -1.38
NUP88-211ENST00000575976 DCANP1Q8TF63 244 aa6.4□□□□□ -1.38
NUP88-211ENST00000575976 C17orf77Q96MU5 243 aa6.4□□□□□ -1.38
NUP88-211ENST00000575976 GPR82Q96P67 336 aa6.4□□□□□ -1.38
NUP88-211ENST00000575976 RNF24Q9Y225 148 aa6.4□□□□□ -1.38
NUP88-211ENST00000575976 FUT9Q9Y231 359 aa6.4□□□□□ -1.38
NUP88-211ENST00000575976 NOTCH3Q9UM47 2321 aa6.4□□□□□ -1.38
NUP88-211ENST00000575976 CMYA5Q8N3K9 4069 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 TRAV2A0A0B4J234 112 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 OR4C46A6NHA9 309 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 K7EIL1 84 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 SNRPCP09234 159 aaKnown RBP6.39□□□□□ -1.39
NUP88-211ENST00000575976 SPP1P10451 314 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 RPL7P18124 248 aaKnown RBP6.39□□□□□ -1.39
NUP88-211ENST00000575976 CD81P60033 236 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 EIF5AP63241 154 aaKnown RBP6.39□□□□□ -1.39
NUP88-211ENST00000575976 FAM122CQ6P4D5 195 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 GTSCR1Q86UQ5 136 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 BPIFA4PQ86YQ2 179 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 BAP18Q8IXM2 172 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 OR10G4Q8NGN3 311 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 OR10G9Q8NGN4 311 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 OR10G7Q8NGN6 311 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 FAM167A-AS1Q96KT0 104 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 SLC25A2Q9BXI2 301 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 MRPL32Q9BYC8 188 aaKnown RBP6.39□□□□□ -1.39
NUP88-211ENST00000575976 NRN1Q9NPD7 142 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 C19orf73Q9NVV2 129 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 UBQLN2Q9UHD9 624 aa6.39□□□□□ -1.39
NUP88-211ENST00000575976 A0A1W2PPV4 95 aa6.38□□□□□ -1.39
NUP88-211ENST00000575976 SOCS3O14543 225 aa6.38□□□□□ -1.39
NUP88-211ENST00000575976 MBP02144 154 aa6.38□□□□□ -1.39
NUP88-211ENST00000575976 SEC11BP0C7V7 166 aa6.38□□□□□ -1.39
NUP88-211ENST00000575976 PYYP10082 97 aa6.38□□□□□ -1.39
NUP88-211ENST00000575976 TPT1P13693 172 aaKnown RBP6.38□□□□□ -1.39
NUP88-211ENST00000575976 ATF4P18848 351 aaPredicted RBP6.38□□□□□ -1.39
NUP88-211ENST00000575976 RHOBP62745 196 aa6.38□□□□□ -1.39
NUP88-211ENST00000575976 ODF3L2Q3SX64 289 aa6.38□□□□□ -1.39
NUP88-211ENST00000575976 TMEM41BQ5BJD5 291 aa6.38□□□□□ -1.39
NUP88-211ENST00000575976 RPP25LQ8N5L8 163 aaKnown RBP6.38□□□□□ -1.39
NUP88-211ENST00000575976 STOML3Q8TAV4 291 aa6.38□□□□□ -1.39
NUP88-211ENST00000575976 WFDC10AQ9H1F0 79 aa6.38□□□□□ -1.39
NUP88-211ENST00000575976 MAP6D1Q9H9H5 199 aa6.38□□□□□ -1.39
NUP88-211ENST00000575976 RPRMQ9NS64 109 aa6.38□□□□□ -1.39
NUP88-211ENST00000575976 BOLA1Q9Y3E2 137 aa6.38□□□□□ -1.39
NUP88-211ENST00000575976 A0A087X0K7 114 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 OR11H12B2RN74 326 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 H3BQ15 152 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 H3BTX0 84 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 BOLA2-SMG1P6H3BVE0 249 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 HMGB3O15347 200 aaKnown RBP6.37□□□□□ -1.39
NUP88-211ENST00000575976 ZNF688P0C7X2 276 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 IGLC2P0DOY2 106 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 CDC34P49427 236 aaPredicted RBP6.37□□□□□ -1.39
NUP88-211ENST00000575976 MEOX2P50222 304 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 CMC4P56277 68 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms