RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 THAP8Q8NA92 274 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 OR2G3Q8NGZ4 309 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 PHYHIPLQ96FC7 376 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 NARS2Q96I59 477 aaKnown RBP9.88□□□□□ -0.83
RPAIN-216ENST00000575599 WWC2-AS2Q96NR7 200 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 TRGV9Q99603 122 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 RSG1Q9BU20 258 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 NPCDR1Q9BY65 106 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 SLC25A32Q9H2D1 315 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 VSIRQ9H7M9 311 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 TIMM9Q9Y5J7 89 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 A0A1W2PS18 150 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 SEC11BP0C7V7 166 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 CRYBB3P26998 211 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 USF2Q15853 346 aaPredicted RBP9.88□□□□□ -0.83
RPAIN-216ENST00000575599 ODF3L2Q3SX64 289 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 AKR1C8PQ5T2L2 129 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 FAM90A2PQ658T7 463 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 Q6ZRG5 221 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 WFDC3Q8IUB2 231 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 BPIFCQ8NFQ6 507 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 MGST2Q99735 147 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 SPATA25Q9BR10 227 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 PSMG3Q9BT73 122 aaPredicted RBP9.88□□□□□ -0.83
RPAIN-216ENST00000575599 ARV1Q9H2C2 271 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 DNASE2O00115 360 aaPredicted RBP9.87□□□□□ -0.83
RPAIN-216ENST00000575599 MBP02144 154 aa9.87□□□□□ -0.83
RPAIN-216ENST00000575599 CD5P06127 495 aa9.87□□□□□ -0.83
RPAIN-216ENST00000575599 PSG1P11464 419 aa9.87□□□□□ -0.83
RPAIN-216ENST00000575599 RPL29P47914 159 aaKnown RBP9.87□□□□□ -0.83
RPAIN-216ENST00000575599 PAFAH1B2P68402 229 aa9.87□□□□□ -0.83
RPAIN-216ENST00000575599 SERF2P84101 59 aa9.87□□□□□ -0.83
RPAIN-216ENST00000575599 ZNF90Q03938 601 aa9.87□□□□□ -0.83
RPAIN-216ENST00000575599 FFAR4Q5NUL3 377 aa9.87□□□□□ -0.83
RPAIN-216ENST00000575599 TEX261Q6UWH6 196 aa9.87□□□□□ -0.83
RPAIN-216ENST00000575599 LINC00322Q6ZN03 302 aaPredicted RBP9.87□□□□□ -0.83
RPAIN-216ENST00000575599 TMED6Q8WW62 240 aa9.87□□□□□ -0.83
RPAIN-216ENST00000575599 GRAMD2BQ96HH9 432 aa9.87□□□□□ -0.83
RPAIN-216ENST00000575599 CITED4Q96RK1 184 aa9.87□□□□□ -0.83
RPAIN-216ENST00000575599 PBDC1Q9BVG4 233 aa9.87□□□□□ -0.83
RPAIN-216ENST00000575599 GGTLC1Q9BX51 225 aa9.87□□□□□ -0.83
RPAIN-216ENST00000575599 SH3BGRL3Q9H299 93 aa9.87□□□□□ -0.83
RPAIN-216ENST00000575599 RETNQ9HD89 108 aa9.87□□□□□ -0.83
RPAIN-216ENST00000575599 PXMP4Q9Y6I8 212 aa9.87□□□□□ -0.83
RPAIN-216ENST00000575599 IGKV1D-37A0A075B6S9 117 aa9.86□□□□□ -0.83
RPAIN-216ENST00000575599 CFDP00746 253 aaPredicted RBP9.86□□□□□ -0.83
RPAIN-216ENST00000575599 SPP1P10451 314 aa9.86□□□□□ -0.83
RPAIN-216ENST00000575599 B2MP61769 119 aa9.86□□□□□ -0.83
RPAIN-216ENST00000575599 ACOT6Q3I5F7 207 aaPredicted RBP9.86□□□□□ -0.83
RPAIN-216ENST00000575599 MIC13Q5XKP0 118 aa9.86□□□□□ -0.83
RPAIN-216ENST00000575599 ALKAL2Q6UX46 152 aa9.86□□□□□ -0.83
RPAIN-216ENST00000575599 TMEM182Q6ZP80 229 aaPredicted RBP9.86□□□□□ -0.83
RPAIN-216ENST00000575599 STPG3Q8N7X2 389 aa9.86□□□□□ -0.83
RPAIN-216ENST00000575599 OR51G1Q8NGK1 321 aa9.86□□□□□ -0.83
RPAIN-216ENST00000575599 RNF125Q96EQ8 232 aa9.86□□□□□ -0.83
RPAIN-216ENST00000575599 MS4A6AQ9H2W1 248 aa9.86□□□□□ -0.83
RPAIN-216ENST00000575599 RABAC1Q9UI14 185 aa9.86□□□□□ -0.83
RPAIN-216ENST00000575599 SLC45A2Q9UMX9 530 aa9.86□□□□□ -0.83
RPAIN-216ENST00000575599 IGKV1OR2-108A0A075B7D4 117 aa9.85□□□□□ -0.83
RPAIN-216ENST00000575599 LOC102724200A0A096LPH7 203 aaPredicted RBP9.85□□□□□ -0.83
RPAIN-216ENST00000575599 LYZP61626 148 aa9.85□□□□□ -0.83
RPAIN-216ENST00000575599 APRG1Q8IVJ8 170 aa9.85□□□□□ -0.83
RPAIN-216ENST00000575599 ZNF680Q8NEM1 530 aa9.85□□□□□ -0.83
RPAIN-216ENST00000575599 STXBP6Q8NFX7 210 aa9.85□□□□□ -0.83
RPAIN-216ENST00000575599 FAM110AQ9BQ89 295 aa9.85□□□□□ -0.83
RPAIN-216ENST00000575599 SLC39A9Q9NUM3 307 aa9.85□□□□□ -0.83
RPAIN-216ENST00000575599 UMAD1C9J7I0 102 aa9.84□□□□□ -0.83
RPAIN-216ENST00000575599 COX7A2P2O60397 106 aa9.84□□□□□ -0.83
RPAIN-216ENST00000575599 LINC00869P0C866 280 aa9.84□□□□□ -0.83
RPAIN-216ENST00000575599 GATA2P23769 480 aaPredicted RBP9.84□□□□□ -0.83
RPAIN-216ENST00000575599 RAB5CP51148 216 aa9.84□□□□□ -0.83
RPAIN-216ENST00000575599 RAB14P61106 215 aa9.84□□□□□ -0.83
RPAIN-216ENST00000575599 ZNF124Q15973 351 aa9.84□□□□□ -0.83
RPAIN-216ENST00000575599 ZNF767PQ75MW2 155 aa9.84□□□□□ -0.83
RPAIN-216ENST00000575599 S100A7AQ86SG5 101 aa9.84□□□□□ -0.83
RPAIN-216ENST00000575599 OR1L4Q8NGR5 311 aa9.84□□□□□ -0.83
RPAIN-216ENST00000575599 RNF141Q8WVD5 230 aa9.84□□□□□ -0.83
RPAIN-216ENST00000575599 MAP6D1Q9H9H5 199 aa9.84□□□□□ -0.83
RPAIN-216ENST00000575599 U3KQE9 123 aa9.84□□□□□ -0.83
RPAIN-216ENST00000575599 A0A1W2PPV4 95 aa9.83□□□□□ -0.84
RPAIN-216ENST00000575599 OR5G3P0C626 314 aa9.83□□□□□ -0.84
RPAIN-216ENST00000575599 RPL35AP18077 110 aaKnown RBP9.83□□□□□ -0.84
RPAIN-216ENST00000575599 ORM2P19652 201 aa9.83□□□□□ -0.84
RPAIN-216ENST00000575599 S100A7P31151 101 aa9.83□□□□□ -0.84
RPAIN-216ENST00000575599 TMEM41BQ5BJD5 291 aa9.83□□□□□ -0.84
RPAIN-216ENST00000575599 PXDC1Q5TGL8 231 aa9.83□□□□□ -0.84
RPAIN-216ENST00000575599 C16orf54Q6UWD8 224 aa9.83□□□□□ -0.84
RPAIN-216ENST00000575599 LINC00528Q8N1L1 170 aa9.83□□□□□ -0.84
RPAIN-216ENST00000575599 FAM24BQ8N5W8 94 aa9.83□□□□□ -0.84
RPAIN-216ENST00000575599 OR1B1Q8NGR6 318 aa9.83□□□□□ -0.84
RPAIN-216ENST00000575599 LRRC20Q8TCA0 184 aa9.83□□□□□ -0.84
RPAIN-216ENST00000575599 GLMPQ8WWB7 406 aa9.83□□□□□ -0.84
RPAIN-216ENST00000575599 PFDN5Q99471 154 aa9.83□□□□□ -0.84
RPAIN-216ENST00000575599 KRTAP4-12Q9BQ66 201 aa9.83□□□□□ -0.84
RPAIN-216ENST00000575599 HELTA6NFD8 242 aa9.82□□□□□ -0.84
RPAIN-216ENST00000575599 HYPMO75409 117 aa9.82□□□□□ -0.84
RPAIN-216ENST00000575599 M6PRP20645 277 aa9.82□□□□□ -0.84
RPAIN-216ENST00000575599 CMC4P56277 68 aaPredicted RBP9.82□□□□□ -0.84
RPAIN-216ENST00000575599 FAM74A1Q5RGS3 127 aa9.82□□□□□ -0.84
RPAIN-216ENST00000575599 OR10G4Q8NGN3 311 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms