RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 MBD3L1Q8WWY6 194 aa7.28□□□□□ -1.24
NPLOC4-216ENST00000574344 SLC35E1Q96K37 410 aa7.28□□□□□ -1.24
NPLOC4-216ENST00000574344 FAM110AQ9BQ89 295 aa7.28□□□□□ -1.24
NPLOC4-216ENST00000574344 NIPSNAP3BQ9BS92 247 aa7.28□□□□□ -1.24
NPLOC4-216ENST00000574344 SLC25A22Q9H936 323 aa7.28□□□□□ -1.24
NPLOC4-216ENST00000574344 NPVFQ9HCQ7 196 aa7.28□□□□□ -1.24
NPLOC4-216ENST00000574344 RETNQ9HD89 108 aa7.28□□□□□ -1.24
NPLOC4-216ENST00000574344 MLXQ9UH92 298 aa7.28□□□□□ -1.24
NPLOC4-216ENST00000574344 VAX2Q9UIW0 290 aa7.28□□□□□ -1.24
NPLOC4-216ENST00000574344 UFC1Q9Y3C8 167 aa7.28□□□□□ -1.24
NPLOC4-216ENST00000574344 CORTO00230 105 aa7.27□□□□□ -1.25
NPLOC4-216ENST00000574344 CEBPGP53567 150 aa7.27□□□□□ -1.25
NPLOC4-216ENST00000574344 WT1-ASQ06250 92 aa7.27□□□□□ -1.25
NPLOC4-216ENST00000574344 KLK9Q2XQG4 91 aa7.27□□□□□ -1.25
NPLOC4-216ENST00000574344 C2orf83Q53S99 150 aa7.27□□□□□ -1.25
NPLOC4-216ENST00000574344 Q56UQ5 140 aa7.27□□□□□ -1.25
NPLOC4-216ENST00000574344 SPSB3Q6PJ21 355 aa7.27□□□□□ -1.25
NPLOC4-216ENST00000574344 UNQ9165/PRO28630Q6UXU0 137 aa7.27□□□□□ -1.25
NPLOC4-216ENST00000574344 VN1R17PQ8TDU5 208 aa7.27□□□□□ -1.25
NPLOC4-216ENST00000574344 SMCO4Q9NRQ5 59 aa7.27□□□□□ -1.25
NPLOC4-216ENST00000574344 NDUFA4L2Q9NRX3 87 aa7.27□□□□□ -1.25
NPLOC4-216ENST00000574344 KLK9Q9UKQ9 250 aa7.27□□□□□ -1.25
NPLOC4-216ENST00000574344 F11RQ9Y624 299 aaKnown RBP7.27□□□□□ -1.25
NPLOC4-216ENST00000574344 PXMP4Q9Y6I8 212 aa7.27□□□□□ -1.25
NPLOC4-216ENST00000574344 CSMD3Q7Z407 3707 aa7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 INS-IGF2F8WCM5 200 aa7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 NDUFS6O75380 124 aaKnown RBP7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 B2MP61769 119 aa7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 RHOBP62745 196 aa7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 PNRC1Q12796 327 aaPredicted RBP7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 ICAM4Q14773 271 aa7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 ETFRF1Q6IPR1 90 aa7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 OR1L6Q8NGR2 347 aa7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 RNASEH2CQ8TDP1 164 aaKnown RBP7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 RXFP4Q8TDU9 374 aa7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 C20orf24Q9BUV8 137 aa7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 GGTLC1Q9BX51 225 aa7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 EDA2RQ9HAV5 297 aa7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 RPS10P5Q9NQ39 176 aa7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 C21orf62Q9NYP8 219 aa7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 MRPL27Q9P0M9 148 aaKnown RBP7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 TENM2Q9NT68 2774 aa7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 RYR3Q15413 4870 aa7.26□□□□□ -1.25
NPLOC4-216ENST00000574344 IGHV3OR16-8A0A075B7F1 116 aa7.25□□□□□ -1.25
NPLOC4-216ENST00000574344 RBMY1BA6NDE4 496 aaKnown RBP7.25□□□□□ -1.25
NPLOC4-216ENST00000574344 RBMY1EA6NEQ0 496 aaKnown RBP7.25□□□□□ -1.25
NPLOC4-216ENST00000574344 PRSS46E5RG02 174 aa7.25□□□□□ -1.25
NPLOC4-216ENST00000574344 RBMY1DP0C7P1 496 aaKnown RBP7.25□□□□□ -1.25
NPLOC4-216ENST00000574344 ATF4P18848 351 aaPredicted RBP7.25□□□□□ -1.25
NPLOC4-216ENST00000574344 NPBWR1P48145 328 aa7.25□□□□□ -1.25
NPLOC4-216ENST00000574344 FGF8P55075 233 aaPredicted RBP7.25□□□□□ -1.25
NPLOC4-216ENST00000574344 MEF2BQ02080 365 aaPredicted RBP7.25□□□□□ -1.25
NPLOC4-216ENST00000574344 PMS2P11Q13670 270 aa7.25□□□□□ -1.25
NPLOC4-216ENST00000574344 ATRAIDQ6UW56 229 aa7.25□□□□□ -1.25
NPLOC4-216ENST00000574344 TMEM190Q8WZ59 177 aa7.25□□□□□ -1.25
NPLOC4-216ENST00000574344 MISP3Q96FF7 219 aa7.25□□□□□ -1.25
NPLOC4-216ENST00000574344 RNF2Q99496 336 aa7.25□□□□□ -1.25
NPLOC4-216ENST00000574344 VSIRQ9H7M9 311 aa7.25□□□□□ -1.25
NPLOC4-216ENST00000574344 DAZ1Q9NQZ3 744 aaKnown RBP7.25□□□□□ -1.25
NPLOC4-216ENST00000574344 PRELID1Q9Y255 219 aa7.25□□□□□ -1.25
NPLOC4-216ENST00000574344 RFNGQ9Y644 331 aa7.25□□□□□ -1.25
NPLOC4-216ENST00000574344 LYSTQ99698 3801 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 TRAV25A0A0B4J276 109 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 FAM74A7A6NL05 159 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 B4DEV8 164 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 DNASE2O00115 360 aaPredicted RBP7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 NDUFA4O00483 81 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 ZNF207O43670 478 aaKnown RBP7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 CXorf1O96002 111 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 SRP19P09132 144 aaKnown RBP7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 GPX4P36969 197 aaPredicted RBP7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 MFAP2P55001 183 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 TAS2R45P59539 299 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 CCL20P78556 96 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 ZNF726P1Q15940 193 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 FAM74A3Q4VXF1 159 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 C15orf54Q8N8G6 183 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 CYB561D1Q8N8Q1 229 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 RAB24Q969Q5 203 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 TVP23CQ96ET8 276 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 MGST2Q99735 147 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 RARRES2Q99969 163 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 TXNDC17Q9BRA2 123 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 CHRDL1Q9BU40 450 aa7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 PUS1Q9Y606 427 aaKnown RBP eCLIP7.24□□□□□ -1.25
NPLOC4-216ENST00000574344 LOC102724200A0A096LPH7 203 aaPredicted RBP7.23□□□□□ -1.25
NPLOC4-216ENST00000574344 C9JQL5 133 aa7.23□□□□□ -1.25
NPLOC4-216ENST00000574344 F6UZH7 168 aa7.23□□□□□ -1.25
NPLOC4-216ENST00000574344 TMEM250H0YL14 139 aa7.23□□□□□ -1.25
NPLOC4-216ENST00000574344 K7EIM0 57 aa7.23□□□□□ -1.25
NPLOC4-216ENST00000574344 NUPL2O15504 423 aaKnown RBP7.23□□□□□ -1.25
NPLOC4-216ENST00000574344 PDE6DO43924 150 aa7.23□□□□□ -1.25
NPLOC4-216ENST00000574344 YIF1AO95070 293 aa7.23□□□□□ -1.25
NPLOC4-216ENST00000574344 C8orf88P0DMB2 117 aa7.23□□□□□ -1.25
NPLOC4-216ENST00000574344 RNASE2P10153 161 aaKnown RBP7.23□□□□□ -1.25
NPLOC4-216ENST00000574344 RPL29P47914 159 aaKnown RBP7.23□□□□□ -1.25
NPLOC4-216ENST00000574344 RELQ04864 619 aaPredicted RBP7.23□□□□□ -1.25
NPLOC4-216ENST00000574344 BSXQ3C1V8 233 aa7.23□□□□□ -1.25
NPLOC4-216ENST00000574344 TMEM88Q6PEY1 159 aa7.23□□□□□ -1.25
NPLOC4-216ENST00000574344 LINC00322Q6ZN03 302 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms