RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 IGKV1OR2-108A0A075B7D4 117 aa12.1□□□□□ -0.47
CCDC40-211ENST00000574099 A0A1W2PPQ1 181 aa12.1□□□□□ -0.47
CCDC40-211ENST00000574099 CRYM-AS1A6NIL9 109 aa12.1□□□□□ -0.47
CCDC40-211ENST00000574099 TAS2R60P59551 318 aa12.1□□□□□ -0.47
CCDC40-211ENST00000574099 RHOBP62745 196 aa12.1□□□□□ -0.47
CCDC40-211ENST00000574099 HIST1H1AQ02539 215 aaPredicted RBP12.1□□□□□ -0.47
CCDC40-211ENST00000574099 TMEM144Q7Z5S9 345 aa12.1□□□□□ -0.47
CCDC40-211ENST00000574099 RXFP4Q8TDU9 374 aa12.1□□□□□ -0.47
CCDC40-211ENST00000574099 PTTG2Q9NZH5 202 aa12.1□□□□□ -0.47
CCDC40-211ENST00000574099 EXTL2Q9UBQ6 330 aa12.1□□□□□ -0.47
CCDC40-211ENST00000574099 PAIP2BQ9ULR5 123 aaKnown RBP12.1□□□□□ -0.47
CCDC40-211ENST00000574099 TMEM56-RWDD3S4R434 201 aa12.1□□□□□ -0.47
CCDC40-211ENST00000574099 ORM2P19652 201 aa12.09□□□□□ -0.47
CCDC40-211ENST00000574099 M6PRP20645 277 aa12.09□□□□□ -0.47
CCDC40-211ENST00000574099 VBP1P61758 197 aa12.09□□□□□ -0.47
CCDC40-211ENST00000574099 TMEM256Q8N2U0 113 aa12.09□□□□□ -0.47
CCDC40-211ENST00000574099 PPP1R14DQ9NXH3 145 aa12.09□□□□□ -0.47
CCDC40-211ENST00000574099 CACFD1Q9UGQ2 172 aa12.09□□□□□ -0.47
CCDC40-211ENST00000574099 MRPS16Q9Y3D3 137 aaKnown RBP12.09□□□□□ -0.47
CCDC40-211ENST00000574099 ZNF701M0R085 212 aaPredicted RBP12.08□□□□□ -0.48
CCDC40-211ENST00000574099 HOXA5P20719 270 aa12.08□□□□□ -0.48
CCDC40-211ENST00000574099 GATA2P23769 480 aaPredicted RBP12.08□□□□□ -0.48
CCDC40-211ENST00000574099 CCR6P51684 374 aa12.08□□□□□ -0.48
CCDC40-211ENST00000574099 SMCO1Q147U7 214 aa12.08□□□□□ -0.48
CCDC40-211ENST00000574099 Q6ZRN7 208 aaPredicted RBP12.08□□□□□ -0.48
CCDC40-211ENST00000574099 OR1B1Q8NGR6 318 aa12.08□□□□□ -0.48
CCDC40-211ENST00000574099 OR10J6PQ8NGY7 276 aa12.08□□□□□ -0.48
CCDC40-211ENST00000574099 RNASE8Q8TDE3 154 aaKnown RBP12.08□□□□□ -0.48
CCDC40-211ENST00000574099 IAPPP10997 89 aa12.07□□□□□ -0.48
CCDC40-211ENST00000574099 THAP8Q8NA92 274 aa12.07□□□□□ -0.48
CCDC40-211ENST00000574099 PGPEP1Q9NXJ5 209 aa12.07□□□□□ -0.48
CCDC40-211ENST00000574099 FLG2Q5D862 2391 aaPredicted RBP12.07□□□□□ -0.48
CCDC40-211ENST00000574099 GAGE12BA1L429 117 aa12.06□□□□□ -0.48
CCDC40-211ENST00000574099 GAGE7O76087 117 aa12.06□□□□□ -0.48
CCDC40-211ENST00000574099 ATP6V1G2O95670 118 aa12.06□□□□□ -0.48
CCDC40-211ENST00000574099 GAGE12FP0CL80 117 aa12.06□□□□□ -0.48
CCDC40-211ENST00000574099 GAGE12GP0CL81 117 aa12.06□□□□□ -0.48
CCDC40-211ENST00000574099 GAGE12IP0CL82 117 aa12.06□□□□□ -0.48
CCDC40-211ENST00000574099 MZT2AQ6P582 158 aa12.06□□□□□ -0.48
CCDC40-211ENST00000574099 TMEM182Q6ZP80 229 aaPredicted RBP12.06□□□□□ -0.48
CCDC40-211ENST00000574099 LYZL2Q7Z4W2 148 aa12.06□□□□□ -0.48
CCDC40-211ENST00000574099 OR1S1Q8NH92 325 aa12.06□□□□□ -0.48
CCDC40-211ENST00000574099 TMEM263Q8WUH6 116 aaKnown RBP12.06□□□□□ -0.48
CCDC40-211ENST00000574099 IL22RA2Q969J5 263 aa12.06□□□□□ -0.48
CCDC40-211ENST00000574099 ZNF503Q96F45 646 aa12.06□□□□□ -0.48
CCDC40-211ENST00000574099 C18orf15Q96N68 181 aa12.06□□□□□ -0.48
CCDC40-211ENST00000574099 TMEM147Q9BVK8 224 aa12.06□□□□□ -0.48
CCDC40-211ENST00000574099 MDFICQ9P1T7 246 aa12.06□□□□□ -0.48
CCDC40-211ENST00000574099 GPR132Q9UNW8 380 aa12.06□□□□□ -0.48
CCDC40-211ENST00000574099 DISC1C4P0D8 188 aa12.05□□□□□ -0.48
CCDC40-211ENST00000574099 EREGO14944 169 aa12.05□□□□□ -0.48
CCDC40-211ENST00000574099 SMR3BP02814 79 aaPredicted RBP12.05□□□□□ -0.48
CCDC40-211ENST00000574099 ERVFC1-1P60608 527 aa12.05□□□□□ -0.48
CCDC40-211ENST00000574099 SURF2Q15527 256 aaPredicted RBP12.05□□□□□ -0.48
CCDC40-211ENST00000574099 GGNBP1Q5YKI7 109 aa12.05□□□□□ -0.48
CCDC40-211ENST00000574099 OR8A1Q8NGG7 326 aa12.05□□□□□ -0.48
CCDC40-211ENST00000574099 OR4D5Q8NGN0 318 aa12.05□□□□□ -0.48
CCDC40-211ENST00000574099 GPR82Q96P67 336 aa12.05□□□□□ -0.48
CCDC40-211ENST00000574099 SLC45A2Q9UMX9 530 aa12.05□□□□□ -0.48
CCDC40-211ENST00000574099 CFDP00746 253 aaPredicted RBP12.04□□□□□ -0.48
CCDC40-211ENST00000574099 ATP5IP56385 69 aaPredicted RBP12.04□□□□□ -0.48
CCDC40-211ENST00000574099 KRTAP10-1P60331 282 aa12.04□□□□□ -0.48
CCDC40-211ENST00000574099 RAB11AP62491 216 aa12.04□□□□□ -0.48
CCDC40-211ENST00000574099 ZNF493Q6ZR52 646 aa12.04□□□□□ -0.48
CCDC40-211ENST00000574099 BPIFCQ8NFQ6 507 aa12.04□□□□□ -0.48
CCDC40-211ENST00000574099 FUNDC2Q9BWH2 189 aa12.04□□□□□ -0.48
CCDC40-211ENST00000574099 VCX3AQ9NNX9 186 aa12.04□□□□□ -0.48
CCDC40-211ENST00000574099 A0A0B4J2A0 478 aa12.03□□□□□ -0.48
CCDC40-211ENST00000574099 ADAP1O75689 374 aa12.03□□□□□ -0.48
CCDC40-211ENST00000574099 DNAH10OSP0CZ25 163 aa12.03□□□□□ -0.48
CCDC40-211ENST00000574099 CDKN1BP46527 198 aa12.03□□□□□ -0.48
CCDC40-211ENST00000574099 KIR3DS1Q14943 382 aa12.03□□□□□ -0.48
CCDC40-211ENST00000574099 CDPF1Q6NVV7 123 aa12.03□□□□□ -0.48
CCDC40-211ENST00000574099 LINC00612Q8N6U2 182 aa12.03□□□□□ -0.48
CCDC40-211ENST00000574099 SHPKQ9UHJ6 478 aa12.03□□□□□ -0.48
CCDC40-211ENST00000574099 KCNIP3Q9Y2W7 256 aa12.03□□□□□ -0.48
CCDC40-211ENST00000574099 VPS13BQ7Z7G8 4022 aa12.02□□□□□ -0.48
CCDC40-211ENST00000574099 H3BRN7 92 aa12.02□□□□□ -0.49
CCDC40-211ENST00000574099 RLN2P04090 185 aa12.02□□□□□ -0.49
CCDC40-211ENST00000574099 AKR1C4P17516 323 aa12.02□□□□□ -0.49
CCDC40-211ENST00000574099 HAMPP81172 84 aa12.02□□□□□ -0.49
CCDC40-211ENST00000574099 OR51S1Q8NGJ8 323 aa12.02□□□□□ -0.49
CCDC40-211ENST00000574099 PARD6GQ9BYG4 376 aaPredicted RBP12.02□□□□□ -0.49
CCDC40-211ENST00000574099 TMPRSS5Q9H3S3 457 aa12.02□□□□□ -0.49
CCDC40-211ENST00000574099 TNFRSF18Q9Y5U5 241 aa12.02□□□□□ -0.49
CCDC40-211ENST00000574099 H7BYZ3 331 aa12.01□□□□□ -0.49
CCDC40-211ENST00000574099 CXCL3P19876 107 aa12.01□□□□□ -0.49
CCDC40-211ENST00000574099 AKR1C1Q04828 323 aa12.01□□□□□ -0.49
CCDC40-211ENST00000574099 AP3S1Q92572 193 aa12.01□□□□□ -0.49
CCDC40-211ENST00000574099 A0A096LPF7 62 aa12□□□□□ -0.49
CCDC40-211ENST00000574099 H3BNG1 76 aa12□□□□□ -0.49
CCDC40-211ENST00000574099 SIVA1O15304 175 aa12□□□□□ -0.49
CCDC40-211ENST00000574099 IFNA5P01569 189 aa12□□□□□ -0.49
CCDC40-211ENST00000574099 AKAIN1P0CW23 69 aa12□□□□□ -0.49
CCDC40-211ENST00000574099 S100A7P31151 101 aa12□□□□□ -0.49
CCDC40-211ENST00000574099 ICAM4Q14773 271 aa12□□□□□ -0.49
CCDC40-211ENST00000574099 PSG3Q16557 428 aa12□□□□□ -0.49
CCDC40-211ENST00000574099 CCDC28AQ8IWP9 274 aa12□□□□□ -0.49
CCDC40-211ENST00000574099 LRRC20Q8TCA0 184 aa12□□□□□ -0.49
CCDC40-211ENST00000574099 C15orf40Q8WUR7 153 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms