RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 NRN1Q9NPD7 142 aa8.22□□□□□ -1.09
CHD3-216ENST00000573936 UBQLN2Q9UHD9 624 aa8.22□□□□□ -1.09
CHD3-216ENST00000573936 SORL1Q92673 2214 aa8.22□□□□□ -1.09
CHD3-216ENST00000573936 C17orf112F2Z3M2 114 aa8.21□□□□□ -1.1
CHD3-216ENST00000573936 H3BRN7 92 aa8.21□□□□□ -1.1
CHD3-216ENST00000573936 COX7A2P2O60397 106 aa8.21□□□□□ -1.1
CHD3-216ENST00000573936 IFNA5P01569 189 aa8.21□□□□□ -1.1
CHD3-216ENST00000573936 CLINT1Q14677 625 aa8.21□□□□□ -1.1
CHD3-216ENST00000573936 OPCMLQ14982 345 aa8.21□□□□□ -1.1
CHD3-216ENST00000573936 SAMD13Q5VXD3 122 aa8.21□□□□□ -1.1
CHD3-216ENST00000573936 ZNF709Q8N972 641 aa8.21□□□□□ -1.1
CHD3-216ENST00000573936 PFDN5Q99471 154 aa8.21□□□□□ -1.1
CHD3-216ENST00000573936 ATP5SQ99766 215 aa8.21□□□□□ -1.1
CHD3-216ENST00000573936 SHANK2-AS3Q9BTD1 123 aa8.21□□□□□ -1.1
CHD3-216ENST00000573936 GGTLC1Q9BX51 225 aa8.21□□□□□ -1.1
CHD3-216ENST00000573936 ARV1Q9H2C2 271 aa8.21□□□□□ -1.1
CHD3-216ENST00000573936 SLC25A22Q9H936 323 aa8.21□□□□□ -1.1
CHD3-216ENST00000573936 DNAJC4Q9NNZ3 241 aa8.21□□□□□ -1.1
CHD3-216ENST00000573936 KCNIP2Q9NS61 270 aa8.21□□□□□ -1.1
CHD3-216ENST00000573936 DOK5Q9P104 306 aa8.21□□□□□ -1.1
CHD3-216ENST00000573936 RYR2Q92736 4967 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 LOC102724200A0A096LPH7 203 aaPredicted RBP8.2□□□□□ -1.1
CHD3-216ENST00000573936 A0A0D9SG52 128 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 RPL7P18124 248 aaKnown RBP8.2□□□□□ -1.1
CHD3-216ENST00000573936 ID1P41134 155 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 MEOX2P50222 304 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 B2MP61769 119 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 SNRPD3P62318 126 aaKnown RBP8.2□□□□□ -1.1
CHD3-216ENST00000573936 PRR20EP86478 221 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 PRR20CP86479 221 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 PRR20DP86480 221 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 PRR20BP86481 221 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 PRR20AP86496 221 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 ODF3L2Q3SX64 289 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 C10orf113Q5VZT2 155 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 MIC13Q5XKP0 118 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 LINC00322Q6ZN03 302 aaPredicted RBP8.2□□□□□ -1.1
CHD3-216ENST00000573936 TMUB2Q71RG4 321 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 SBSPONQ8IVN8 264 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 SCGB1C1Q8TD33 95 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 DCANP1Q8TF63 244 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 ASCL2Q99929 193 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 WDR61Q9GZS3 305 aaKnown RBP8.2□□□□□ -1.1
CHD3-216ENST00000573936 WFDC10AQ9H1F0 79 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 ZMAT4Q9H898 229 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 MAP6D1Q9H9H5 199 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 SLC39A9Q9NUM3 307 aa8.2□□□□□ -1.1
CHD3-216ENST00000573936 BCL2L11O43521 198 aa8.19□□□□□ -1.1
CHD3-216ENST00000573936 DEFB131AP59861 70 aa8.19□□□□□ -1.1
CHD3-216ENST00000573936 PATE2Q6UY27 113 aa8.19□□□□□ -1.1
CHD3-216ENST00000573936 LINC00305Q7Z4B0 112 aa8.19□□□□□ -1.1
CHD3-216ENST00000573936 GATAD1Q8WUU5 269 aa8.19□□□□□ -1.1
CHD3-216ENST00000573936 NPCDR1Q9BY65 106 aa8.19□□□□□ -1.1
CHD3-216ENST00000573936 PARD6GQ9BYG4 376 aaPredicted RBP8.19□□□□□ -1.1
CHD3-216ENST00000573936 SLC25A32Q9H2D1 315 aa8.19□□□□□ -1.1
CHD3-216ENST00000573936 PXMP4Q9Y6I8 212 aa8.19□□□□□ -1.1
CHD3-216ENST00000573936 KANTRA0A1W2PQU2 76 aa8.18□□□□□ -1.1
CHD3-216ENST00000573936 RBMY1BA6NDE4 496 aaKnown RBP8.18□□□□□ -1.1
CHD3-216ENST00000573936 RBMY1EA6NEQ0 496 aaKnown RBP8.18□□□□□ -1.1
CHD3-216ENST00000573936 TAAR5O14804 337 aa8.18□□□□□ -1.1
CHD3-216ENST00000573936 RBMY1DP0C7P1 496 aaKnown RBP8.18□□□□□ -1.1
CHD3-216ENST00000573936 ZNF688P0C7X2 276 aa8.18□□□□□ -1.1
CHD3-216ENST00000573936 ATF4P18848 351 aaPredicted RBP8.18□□□□□ -1.1
CHD3-216ENST00000573936 APOC4P55056 127 aa8.18□□□□□ -1.1
CHD3-216ENST00000573936 ZNF266Q14584 549 aa8.18□□□□□ -1.1
CHD3-216ENST00000573936 HAGHQ16775 308 aa8.18□□□□□ -1.1
CHD3-216ENST00000573936 RPL7L1Q6DKI1 246 aaKnown RBP8.18□□□□□ -1.1
CHD3-216ENST00000573936 APRG1Q8IVJ8 170 aa8.18□□□□□ -1.1
CHD3-216ENST00000573936 UHRF2Q96PU4 802 aa8.18□□□□□ -1.1
CHD3-216ENST00000573936 CITED4Q96RK1 184 aa8.18□□□□□ -1.1
CHD3-216ENST00000573936 ARPC5LQ9BPX5 153 aa8.18□□□□□ -1.1
CHD3-216ENST00000573936 RSG1Q9BU20 258 aa8.18□□□□□ -1.1
CHD3-216ENST00000573936 SCRT1Q9BWW7 348 aa8.18□□□□□ -1.1
CHD3-216ENST00000573936 CYTL1Q9NRR1 136 aa8.18□□□□□ -1.1
CHD3-216ENST00000573936 UBE2CO00762 179 aa8.17□□□□□ -1.1
CHD3-216ENST00000573936 PSMB3P49720 205 aa8.17□□□□□ -1.1
CHD3-216ENST00000573936 LEMD1Q68G75 181 aa8.17□□□□□ -1.1
CHD3-216ENST00000573936 BPIFA4PQ86YQ2 179 aa8.17□□□□□ -1.1
CHD3-216ENST00000573936 STHQ8IWL8 128 aa8.17□□□□□ -1.1
CHD3-216ENST00000573936 FAM24BQ8N5W8 94 aa8.17□□□□□ -1.1
CHD3-216ENST00000573936 TMEM37Q8WXS4 190 aa8.17□□□□□ -1.1
CHD3-216ENST00000573936 LYSTQ99698 3801 aa8.17□□□□□ -1.1
CHD3-216ENST00000573936 SPATA25Q9BR10 227 aa8.17□□□□□ -1.1
CHD3-216ENST00000573936 BOLA1Q9Y3E2 137 aa8.17□□□□□ -1.1
CHD3-216ENST00000573936 A0A087X0K7 114 aa8.16□□□□□ -1.1
CHD3-216ENST00000573936 BORCS7-ASMTA0A0B4J1R7 106 aa8.16□□□□□ -1.1
CHD3-216ENST00000573936 KIR2DL5BA0A0G2JN68 375 aa8.16□□□□□ -1.1
CHD3-216ENST00000573936 KIR2DL5BA0A0G2JPC4 375 aa8.16□□□□□ -1.1
CHD3-216ENST00000573936 ISLRO14498 428 aa8.16□□□□□ -1.1
CHD3-216ENST00000573936 PSMG4Q5JS54 123 aa8.16□□□□□ -1.1
CHD3-216ENST00000573936 KIR2DL5AQ8N109 375 aa8.16□□□□□ -1.1
CHD3-216ENST00000573936 KIR2DL5BQ8NHK3 375 aa8.16□□□□□ -1.1
CHD3-216ENST00000573936 C16orf92Q96LL3 132 aa8.16□□□□□ -1.1
CHD3-216ENST00000573936 TM2D3Q9BRN9 247 aa8.16□□□□□ -1.1
CHD3-216ENST00000573936 SOCS3O14543 225 aa8.15□□□□□ -1.1
CHD3-216ENST00000573936 JTBO76095 146 aa8.15□□□□□ -1.1
CHD3-216ENST00000573936 CASC10Q5T4H9 136 aa8.15□□□□□ -1.1
CHD3-216ENST00000573936 SPATA31B1PQ5VZV4 182 aa8.15□□□□□ -1.1
CHD3-216ENST00000573936 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.15□□□□□ -1.1
CHD3-216ENST00000573936 HSD17B11Q8NBQ5 300 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms