RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 C1orf158Q8N1D5 194 aa6.56□□□□□ -1.36
NPLOC4-210ENST00000572824 SOSTQ9BQB4 213 aa6.56□□□□□ -1.36
NPLOC4-210ENST00000572824 CCDC59Q9P031 241 aaKnown RBP6.56□□□□□ -1.36
NPLOC4-210ENST00000572824 DNAH5Q8TE73 4624 aa6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 TRAV30A0A087WSZ9 112 aa6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 A0A0B4J2A0 478 aa6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 ZFP92A6NM28 416 aa6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 C11orf94C9JXX5 98 aa6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 PRSS46E5RG02 174 aa6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 CTDSPLO15194 276 aa6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 GSTZ1O43708 216 aaPredicted RBP6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 PITX3O75364 302 aa6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 TNFRSF6BO95407 300 aa6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 HTN3P15516 51 aa6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 TNFSF8P32971 234 aa6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 EIF2B2P49770 351 aaKnown RBP6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 SSBP1Q04837 148 aaKnown RBP6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 OR4B1Q8NGF8 309 aa6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 OR1S1Q8NH92 325 aa6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 NARS2Q96I59 477 aaKnown RBP6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 PRRT1Q99946 306 aa6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 SAV1Q9H4B6 383 aaPredicted RBP6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 SHPKQ9UHJ6 478 aa6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 PAIP2BQ9ULR5 123 aaKnown RBP6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 V9GYH0 126 aa6.55□□□□□ -1.36
NPLOC4-210ENST00000572824 APOBP04114 4563 aaKnown RBP6.54□□□□□ -1.36
NPLOC4-210ENST00000572824 B3GALNT1O75752 331 aa6.54□□□□□ -1.36
NPLOC4-210ENST00000572824 CCR6P51684 374 aa6.54□□□□□ -1.36
NPLOC4-210ENST00000572824 MRPS10P82664 201 aaKnown RBP6.54□□□□□ -1.36
NPLOC4-210ENST00000572824 PPP1R1AQ13522 171 aa6.54□□□□□ -1.36
NPLOC4-210ENST00000572824 ZNF79Q15937 498 aa6.54□□□□□ -1.36
NPLOC4-210ENST00000572824 FAM222AQ5U5X8 452 aa6.54□□□□□ -1.36
NPLOC4-210ENST00000572824 FAM78BQ5VT40 261 aa6.54□□□□□ -1.36
NPLOC4-210ENST00000572824 AMTNQ6UX39 209 aa6.54□□□□□ -1.36
NPLOC4-210ENST00000572824 RNF182Q8N6D2 247 aa6.54□□□□□ -1.36
NPLOC4-210ENST00000572824 IL22RA2Q969J5 263 aa6.54□□□□□ -1.36
NPLOC4-210ENST00000572824 RNF126Q9BV68 326 aa6.54□□□□□ -1.36
NPLOC4-210ENST00000572824 KRTAP4-5Q9BYR2 181 aa6.54□□□□□ -1.36
NPLOC4-210ENST00000572824 SLC25A22Q9H936 323 aa6.54□□□□□ -1.36
NPLOC4-210ENST00000572824 TRAV8-2A0A0B4J237 113 aa6.53□□□□□ -1.36
NPLOC4-210ENST00000572824 SNRPCP09234 159 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-210ENST00000572824 NKX2-1P43699 371 aaPredicted RBP6.53□□□□□ -1.36
NPLOC4-210ENST00000572824 SNRPD3P62318 126 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-210ENST00000572824 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.53□□□□□ -1.36
NPLOC4-210ENST00000572824 ZNF575Q86XF7 245 aa6.53□□□□□ -1.36
NPLOC4-210ENST00000572824 SLC35E1Q96K37 410 aa6.53□□□□□ -1.36
NPLOC4-210ENST00000572824 DOK5Q9P104 306 aa6.53□□□□□ -1.36
NPLOC4-210ENST00000572824 A0A0J9YX75 114 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 M0R2Z0 102 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 WRBO00258 174 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 SCGB2A1O75556 95 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 ADAP1O75689 374 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 HOXB5P09067 269 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 TMEM41BQ5BJD5 291 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 ETFRF1Q6IPR1 90 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 FOXI2Q6ZQN5 318 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 ACOT7LQ6ZUV0 252 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 BAP18Q8IXM2 172 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 POM121L12Q8N7R1 296 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 THAP8Q8NA92 274 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 MCFD2Q8NI22 146 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 COQ8AQ8NI60 647 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 RAB2BQ8WUD1 216 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 C15orf40Q8WUR7 153 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 SCP2D1Q9UJQ7 156 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 YTHDF2Q9Y5A9 579 aaKnown RBP6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 U3KQ87 197 aa6.52□□□□□ -1.37
NPLOC4-210ENST00000572824 TRAV12-2A0A075B6T6 113 aa6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 FABP12A6NFH5 140 aa6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 ZNF705GA8MUZ8 300 aaPredicted RBP6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 CRXO43186 299 aaPredicted RBP6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 PSMB3P49720 205 aa6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 AP2S1P53680 142 aaPredicted RBP6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 TCTAP57738 103 aa6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 UBE2MP61081 183 aaKnown RBP6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 FCN2Q15485 313 aa6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 SPINK13Q1W4C9 94 aa6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 KRTAP15-1Q3LI76 137 aa6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 PYDC2Q56P42 97 aa6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 GGNBP1Q5YKI7 109 aa6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 OR8G2PQ6IF36 304 aa6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 TMEM88Q6PEY1 159 aa6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 PPP1R14BQ96C90 147 aa6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 DAZAP1Q96EP5 407 aaKnown RBP6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 UHRF2Q96PU4 802 aa6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 TRGV9Q99603 122 aa6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 RSG1Q9BU20 258 aa6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 NDUFAF3Q9BU61 184 aa6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 PARD6GQ9BYG4 376 aaPredicted RBP6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 FLVCR2Q9UPI3 526 aa6.51□□□□□ -1.37
NPLOC4-210ENST00000572824 PLAC8L1A1L4L8 177 aa6.5□□□□□ -1.37
NPLOC4-210ENST00000572824 ZNF98A6NK75 572 aa6.5□□□□□ -1.37
NPLOC4-210ENST00000572824 H3BTX0 84 aa6.5□□□□□ -1.37
NPLOC4-210ENST00000572824 NUDT3O95989 172 aa6.5□□□□□ -1.37
NPLOC4-210ENST00000572824 ORM2P19652 201 aa6.5□□□□□ -1.37
NPLOC4-210ENST00000572824 AZU1P20160 251 aa6.5□□□□□ -1.37
NPLOC4-210ENST00000572824 GPX4P36969 197 aaPredicted RBP6.5□□□□□ -1.37
NPLOC4-210ENST00000572824 TMBIM6P55061 237 aa6.5□□□□□ -1.37
NPLOC4-210ENST00000572824 PAX9P55771 341 aa6.5□□□□□ -1.37
NPLOC4-210ENST00000572824 POLR2GP62487 172 aaKnown RBP eCLIP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms