RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 FAM24BQ8N5W8 94 aa16.47■□□□□ 0.23
RAB40B-207ENST00000572603 STXBP6Q8NFX7 210 aa16.47■□□□□ 0.23
RAB40B-207ENST00000572603 DCANP1Q8TF63 244 aa16.47■□□□□ 0.23
RAB40B-207ENST00000572603 GATAD1Q8WUU5 269 aa16.47■□□□□ 0.23
RAB40B-207ENST00000572603 SMAD5-AS1Q9Y6J3 95 aa16.47■□□□□ 0.23
RAB40B-207ENST00000572603 K7EQG2 157 aa16.46■□□□□ 0.23
RAB40B-207ENST00000572603 TAAR5O14804 337 aa16.46■□□□□ 0.23
RAB40B-207ENST00000572603 MRPS12O15235 138 aaKnown RBP16.46■□□□□ 0.23
RAB40B-207ENST00000572603 S100A7P31151 101 aa16.46■□□□□ 0.23
RAB40B-207ENST00000572603 FFAR4Q5NUL3 377 aa16.46■□□□□ 0.23
RAB40B-207ENST00000572603 GTSCR1Q86UQ5 136 aa16.46■□□□□ 0.23
RAB40B-207ENST00000572603 WFDC10AQ9H1F0 79 aa16.46■□□□□ 0.23
RAB40B-207ENST00000572603 A0A0D9SG52 128 aa16.45■□□□□ 0.22
RAB40B-207ENST00000572603 RPL11P62913 178 aaKnown RBP16.45■□□□□ 0.22
RAB40B-207ENST00000572603 SPATA31B1PQ5VZV4 182 aa16.45■□□□□ 0.22
RAB40B-207ENST00000572603 OR2G3Q8NGZ4 309 aa16.45■□□□□ 0.22
RAB40B-207ENST00000572603 GPR82Q96P67 336 aa16.45■□□□□ 0.22
RAB40B-207ENST00000572603 ARPC5LQ9BPX5 153 aa16.45■□□□□ 0.22
RAB40B-207ENST00000572603 PSMG3Q9BT73 122 aaPredicted RBP16.45■□□□□ 0.22
RAB40B-207ENST00000572603 SH3BGRL3Q9H299 93 aa16.45■□□□□ 0.22
RAB40B-207ENST00000572603 NRN1Q9NPD7 142 aa16.45■□□□□ 0.22
RAB40B-207ENST00000572603 BORCS7-ASMTA0A0B4J1R7 106 aa16.44■□□□□ 0.22
RAB40B-207ENST00000572603 BCL2L11O43521 198 aa16.44■□□□□ 0.22
RAB40B-207ENST00000572603 S100A7AQ86SG5 101 aa16.44■□□□□ 0.22
RAB40B-207ENST00000572603 WFDC3Q8IUB2 231 aa16.44■□□□□ 0.22
RAB40B-207ENST00000572603 TRAV5A0A0B4J249 113 aa16.43■□□□□ 0.22
RAB40B-207ENST00000572603 SOCS3O14543 225 aa16.43■□□□□ 0.22
RAB40B-207ENST00000572603 PAFAH1B2P68402 229 aa16.43■□□□□ 0.22
RAB40B-207ENST00000572603 LGALSLQ3ZCW2 172 aaPredicted RBP16.43■□□□□ 0.22
RAB40B-207ENST00000572603 TMUB2Q71RG4 321 aa16.43■□□□□ 0.22
RAB40B-207ENST00000572603 HYLS1Q96M11 299 aa16.43■□□□□ 0.22
RAB40B-207ENST00000572603 MAP6D1Q9H9H5 199 aa16.43■□□□□ 0.22
RAB40B-207ENST00000572603 SEPSECSQ9HD40 501 aaKnown RBP16.43■□□□□ 0.22
RAB40B-207ENST00000572603 DNAH9Q9NYC9 4486 aa16.42■□□□□ 0.22
RAB40B-207ENST00000572603 DNASE2O00115 360 aaPredicted RBP16.42■□□□□ 0.22
RAB40B-207ENST00000572603 JTBO76095 146 aa16.42■□□□□ 0.22
RAB40B-207ENST00000572603 RPL7P18124 248 aaKnown RBP16.42■□□□□ 0.22
RAB40B-207ENST00000572603 GALR1P47211 349 aa16.42■□□□□ 0.22
RAB40B-207ENST00000572603 RAB2AP61019 212 aa16.42■□□□□ 0.22
RAB40B-207ENST00000572603 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.42■□□□□ 0.22
RAB40B-207ENST00000572603 MRAPQ8TCY5 172 aa16.42■□□□□ 0.22
RAB40B-207ENST00000572603 FAM110AQ9BQ89 295 aa16.42■□□□□ 0.22
RAB40B-207ENST00000572603 UBQLN2Q9UHD9 624 aa16.42■□□□□ 0.22
RAB40B-207ENST00000572603 A0A087X0K7 114 aa16.41■□□□□ 0.22
RAB40B-207ENST00000572603 FAM78BQ5VT40 261 aa16.41■□□□□ 0.22
RAB40B-207ENST00000572603 MIR17HGQ75NE6 70 aa16.41■□□□□ 0.22
RAB40B-207ENST00000572603 FAM167A-AS1Q96KT0 104 aa16.41■□□□□ 0.22
RAB40B-207ENST00000572603 MRPL32Q9BYC8 188 aaKnown RBP16.41■□□□□ 0.22
RAB40B-207ENST00000572603 RNF24Q9Y225 148 aa16.41■□□□□ 0.22
RAB40B-207ENST00000572603 KANTRA0A1W2PQU2 76 aa16.4■□□□□ 0.22
RAB40B-207ENST00000572603 ZFP69Q49AA0 526 aa16.4■□□□□ 0.22
RAB40B-207ENST00000572603 C9orf62Q8N4C0 152 aa16.4■□□□□ 0.22
RAB40B-207ENST00000572603 DEFB125Q8N687 156 aa16.4■□□□□ 0.22
RAB40B-207ENST00000572603 GNPNAT1Q96EK6 184 aaPredicted RBP16.4■□□□□ 0.22
RAB40B-207ENST00000572603 SLC25A2Q9BXI2 301 aa16.4■□□□□ 0.22
RAB40B-207ENST00000572603 FUT9Q9Y231 359 aa16.4■□□□□ 0.22
RAB40B-207ENST00000572603 OR11H12B2RN74 326 aa16.39■□□□□ 0.21
RAB40B-207ENST00000572603 ZNF688P0C7X2 276 aa16.39■□□□□ 0.21
RAB40B-207ENST00000572603 IGLC2P0DOY2 106 aa16.39■□□□□ 0.21
RAB40B-207ENST00000572603 IGHV4-30-4P0DP06 118 aa16.39■□□□□ 0.21
RAB40B-207ENST00000572603 M6PRP20645 277 aa16.39■□□□□ 0.21
RAB40B-207ENST00000572603 ACOT6Q3I5F7 207 aaPredicted RBP16.39■□□□□ 0.21
RAB40B-207ENST00000572603 CITED4Q96RK1 184 aa16.39■□□□□ 0.21
RAB40B-207ENST00000572603 A8MZ25 164 aa16.38■□□□□ 0.21
RAB40B-207ENST00000572603 SERF2P84101 59 aa16.38■□□□□ 0.21
RAB40B-207ENST00000572603 ZNF124Q15973 351 aa16.38■□□□□ 0.21
RAB40B-207ENST00000572603 BPIFA4PQ86YQ2 179 aa16.38■□□□□ 0.21
RAB40B-207ENST00000572603 ZNF471Q9BX82 626 aaPredicted RBP16.38■□□□□ 0.21
RAB40B-207ENST00000572603 PFDN1O60925 122 aa16.37■□□□□ 0.21
RAB40B-207ENST00000572603 SPP1P10451 314 aa16.37■□□□□ 0.21
RAB40B-207ENST00000572603 ATF4P18848 351 aaPredicted RBP16.37■□□□□ 0.21
RAB40B-207ENST00000572603 MEOX2P50222 304 aa16.37■□□□□ 0.21
RAB40B-207ENST00000572603 TMEM14CQ9P0S9 112 aa16.37■□□□□ 0.21
RAB40B-207ENST00000572603 AGRNO00468 2067 aa16.36■□□□□ 0.21
RAB40B-207ENST00000572603 TRAV8-2A0A0B4J237 113 aa16.36■□□□□ 0.21
RAB40B-207ENST00000572603 H3BQ15 152 aa16.36■□□□□ 0.21
RAB40B-207ENST00000572603 EIF3GO75821 320 aaKnown RBP eCLIP16.36■□□□□ 0.21
RAB40B-207ENST00000572603 DEFB131AP59861 70 aa16.36■□□□□ 0.21
RAB40B-207ENST00000572603 RHOBP62745 196 aa16.36■□□□□ 0.21
RAB40B-207ENST00000572603 APRG1Q8IVJ8 170 aa16.36■□□□□ 0.21
RAB40B-207ENST00000572603 ZNF503Q96F45 646 aa16.36■□□□□ 0.21
RAB40B-207ENST00000572603 SRD5A3Q9H8P0 318 aa16.36■□□□□ 0.21
RAB40B-207ENST00000572603 ISLRO14498 428 aa16.35■□□□□ 0.21
RAB40B-207ENST00000572603 SNRPCP09234 159 aaKnown RBP16.35■□□□□ 0.21
RAB40B-207ENST00000572603 PYYP10082 97 aa16.35■□□□□ 0.21
RAB40B-207ENST00000572603 PSMB3P49720 205 aa16.35■□□□□ 0.21
RAB40B-207ENST00000572603 FAM122CQ6P4D5 195 aa16.35■□□□□ 0.21
RAB40B-207ENST00000572603 RPP25LQ8N5L8 163 aaKnown RBP16.35■□□□□ 0.21
RAB40B-207ENST00000572603 OR10G4Q8NGN3 311 aa16.35■□□□□ 0.21
RAB40B-207ENST00000572603 OR10G9Q8NGN4 311 aa16.35■□□□□ 0.21
RAB40B-207ENST00000572603 OR10G7Q8NGN6 311 aa16.35■□□□□ 0.21
RAB40B-207ENST00000572603 STOML3Q8TAV4 291 aa16.35■□□□□ 0.21
RAB40B-207ENST00000572603 SLC17A3O00476 420 aa16.34■□□□□ 0.21
RAB40B-207ENST00000572603 FRMD6-AS1P0C7T7 363 aa16.34■□□□□ 0.21
RAB40B-207ENST00000572603 NKX2-5P52952 324 aaPredicted RBP16.34■□□□□ 0.21
RAB40B-207ENST00000572603 CMC4P56277 68 aaPredicted RBP16.34■□□□□ 0.21
RAB40B-207ENST00000572603 TMEM41BQ5BJD5 291 aa16.34■□□□□ 0.21
RAB40B-207ENST00000572603 PSMG4Q5JS54 123 aa16.34■□□□□ 0.21
RAB40B-207ENST00000572603 SAMD13Q5VXD3 122 aa16.34■□□□□ 0.21
RAB40B-207ENST00000572603 LINC00322Q6ZN03 302 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms