RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 NEGR1Q7Z3B1 354 aa8.69□□□□□ -1.02
CCDC40-208ENST00000572270 OR8A1Q8NGG7 326 aa8.69□□□□□ -1.02
CCDC40-208ENST00000572270 OR1B1Q8NGR6 318 aa8.69□□□□□ -1.02
CCDC40-208ENST00000572270 OR52E5Q8NH55 327 aa8.69□□□□□ -1.02
CCDC40-208ENST00000572270 RBPMSQ93062 196 aaKnown RBP8.69□□□□□ -1.02
CCDC40-208ENST00000572270 TNXBP22105 4242 aa8.68□□□□□ -1.02
CCDC40-208ENST00000572270 GABARAPH6UMI1 98 aa8.68□□□□□ -1.02
CCDC40-208ENST00000572270 GABARAPO95166 117 aa8.68□□□□□ -1.02
CCDC40-208ENST00000572270 DAZ2Q13117 558 aaKnown RBP8.68□□□□□ -1.02
CCDC40-208ENST00000572270 ACOT6Q3I5F7 207 aaPredicted RBP8.68□□□□□ -1.02
CCDC40-208ENST00000572270 OR5H6Q8NGV6 325 aa8.68□□□□□ -1.02
CCDC40-208ENST00000572270 GPR82Q96P67 336 aa8.68□□□□□ -1.02
CCDC40-208ENST00000572270 CHAC1Q9BUX1 264 aa8.68□□□□□ -1.02
CCDC40-208ENST00000572270 RCL1Q9Y2P8 373 aaKnown RBP8.68□□□□□ -1.02
CCDC40-208ENST00000572270 TRAV8-2A0A0B4J237 113 aa8.67□□□□□ -1.02
CCDC40-208ENST00000572270 PGAM2P15259 253 aa8.67□□□□□ -1.02
CCDC40-208ENST00000572270 UCP3P55916 312 aa8.67□□□□□ -1.02
CCDC40-208ENST00000572270 RPL37AP61513 92 aaKnown RBP8.67□□□□□ -1.02
CCDC40-208ENST00000572270 ASAH1Q13510 395 aa8.67□□□□□ -1.02
CCDC40-208ENST00000572270 OR2F1Q13607 317 aa8.67□□□□□ -1.02
CCDC40-208ENST00000572270 OR4D5Q8NGN0 318 aa8.67□□□□□ -1.02
CCDC40-208ENST00000572270 SLC35E1Q96K37 410 aa8.67□□□□□ -1.02
CCDC40-208ENST00000572270 TP53RKQ96S44 253 aa8.67□□□□□ -1.02
CCDC40-208ENST00000572270 DNAJC4Q9NNZ3 241 aa8.67□□□□□ -1.02
CCDC40-208ENST00000572270 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.67□□□□□ -1.02
CCDC40-208ENST00000572270 PRO0255Q9UI72 69 aa8.67□□□□□ -1.02
CCDC40-208ENST00000572270 ANAPC10Q9UM13 185 aa8.67□□□□□ -1.02
CCDC40-208ENST00000572270 FUT9Q9Y231 359 aa8.67□□□□□ -1.02
CCDC40-208ENST00000572270 TRGV1A0A0A0MS02 117 aa8.66□□□□□ -1.02
CCDC40-208ENST00000572270 A0A0G2JRQ6 117 aa8.66□□□□□ -1.02
CCDC40-208ENST00000572270 IGLV2-8P01709 118 aa8.66□□□□□ -1.02
CCDC40-208ENST00000572270 NAT1P18440 290 aa8.66□□□□□ -1.02
CCDC40-208ENST00000572270 HLA-DMAP28067 261 aa8.66□□□□□ -1.02
CCDC40-208ENST00000572270 S100A7P31151 101 aa8.66□□□□□ -1.02
CCDC40-208ENST00000572270 SLAQ13239 276 aa8.66□□□□□ -1.02
CCDC40-208ENST00000572270 PRSS48Q7RTY5 328 aa8.66□□□□□ -1.02
CCDC40-208ENST00000572270 TMEM170AQ8WVE7 144 aa8.66□□□□□ -1.02
CCDC40-208ENST00000572270 DUSP21Q9H596 190 aa8.66□□□□□ -1.02
CCDC40-208ENST00000572270 Q9HAA7 133 aa8.66□□□□□ -1.02
CCDC40-208ENST00000572270 IGKV1D-37A0A075B6S9 117 aa8.65□□□□□ -1.02
CCDC40-208ENST00000572270 C3orf85A0A1B0GTC6 90 aa8.65□□□□□ -1.02
CCDC40-208ENST00000572270 GAS8-AS1O95177 125 aa8.65□□□□□ -1.02
CCDC40-208ENST00000572270 SRIP30626 198 aa8.65□□□□□ -1.02
CCDC40-208ENST00000572270 PIGPP57054 158 aa8.65□□□□□ -1.02
CCDC40-208ENST00000572270 RND3P61587 244 aa8.65□□□□□ -1.02
CCDC40-208ENST00000572270 AARDQ4LEZ3 155 aa8.65□□□□□ -1.02
CCDC40-208ENST00000572270 NMSQ5H8A3 153 aa8.65□□□□□ -1.02
CCDC40-208ENST00000572270 FAM219AQ8IW50 185 aa8.65□□□□□ -1.02
CCDC40-208ENST00000572270 ARRDC1Q8N5I2 433 aa8.65□□□□□ -1.02
CCDC40-208ENST00000572270 CIRBP-AS1Q8TBR5 109 aa8.65□□□□□ -1.02
CCDC40-208ENST00000572270 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.64□□□□□ -1.03
CCDC40-208ENST00000572270 PRAF2O60831 178 aa8.64□□□□□ -1.03
CCDC40-208ENST00000572270 RCVRNP35243 200 aa8.64□□□□□ -1.03
CCDC40-208ENST00000572270 TDRG1Q3Y452 100 aa8.64□□□□□ -1.03
CCDC40-208ENST00000572270 GFI1BQ5VTD9 330 aa8.64□□□□□ -1.03
CCDC40-208ENST00000572270 CCDC190Q86UF4 302 aa8.64□□□□□ -1.03
CCDC40-208ENST00000572270 PCNPQ8WW12 178 aaKnown RBP8.64□□□□□ -1.03
CCDC40-208ENST00000572270 ZNF486Q96H40 463 aaPredicted RBP8.64□□□□□ -1.03
CCDC40-208ENST00000572270 TXNL4BQ9NX01 149 aaKnown RBP8.64□□□□□ -1.03
CCDC40-208ENST00000572270 SLC45A2Q9UMX9 530 aa8.64□□□□□ -1.03
CCDC40-208ENST00000572270 HHLA3Q9XRX5 114 aa8.64□□□□□ -1.03
CCDC40-208ENST00000572270 TMEM56-RWDD3S4R434 201 aa8.64□□□□□ -1.03
CCDC40-208ENST00000572270 CFDP00746 253 aaPredicted RBP8.63□□□□□ -1.03
CCDC40-208ENST00000572270 IGHV3-53P01767 116 aa8.63□□□□□ -1.03
CCDC40-208ENST00000572270 PI3P19957 117 aa8.63□□□□□ -1.03
CCDC40-208ENST00000572270 HNRNPA3P51991 378 aaKnown RBP8.63□□□□□ -1.03
CCDC40-208ENST00000572270 CRYBA4P53673 196 aa8.63□□□□□ -1.03
CCDC40-208ENST00000572270 ZNF415Q09FC8 603 aa8.63□□□□□ -1.03
CCDC40-208ENST00000572270 STEAP1BQ6NZ63 245 aa8.63□□□□□ -1.03
CCDC40-208ENST00000572270 ZNF680Q8NEM1 530 aa8.63□□□□□ -1.03
CCDC40-208ENST00000572270 LRRC20Q8TCA0 184 aa8.63□□□□□ -1.03
CCDC40-208ENST00000572270 ST6GAL2Q96JF0 529 aa8.63□□□□□ -1.03
CCDC40-208ENST00000572270 C8orf49Q96NF6 230 aa8.63□□□□□ -1.03
CCDC40-208ENST00000572270 TRGV9Q99603 122 aa8.63□□□□□ -1.03
CCDC40-208ENST00000572270 PYGO2Q9BRQ0 406 aa8.63□□□□□ -1.03
CCDC40-208ENST00000572270 IBA57-AS1B1ANH7 110 aa8.62□□□□□ -1.03
CCDC40-208ENST00000572270 GYPEP15421 78 aa8.62□□□□□ -1.03
CCDC40-208ENST00000572270 MXD1Q05195 221 aa8.62□□□□□ -1.03
CCDC40-208ENST00000572270 SP6Q3SY56 376 aa8.62□□□□□ -1.03
CCDC40-208ENST00000572270 LINC01620Q4KN68 170 aa8.62□□□□□ -1.03
CCDC40-208ENST00000572270 GGNBP1Q5YKI7 109 aa8.62□□□□□ -1.03
CCDC40-208ENST00000572270 LYSMD2Q8IV50 215 aa8.62□□□□□ -1.03
CCDC40-208ENST00000572270 DAZAP1Q96EP5 407 aaKnown RBP8.62□□□□□ -1.03
CCDC40-208ENST00000572270 S100A16Q96FQ6 103 aaKnown RBP8.62□□□□□ -1.03
CCDC40-208ENST00000572270 TMEM147Q9BVK8 224 aa8.62□□□□□ -1.03
CCDC40-208ENST00000572270 VCXQ9H320 206 aa8.62□□□□□ -1.03
CCDC40-208ENST00000572270 GSN-AS1Q9NRJ2 163 aa8.62□□□□□ -1.03
CCDC40-208ENST00000572270 CACNG5Q9UF02 275 aa8.62□□□□□ -1.03
CCDC40-208ENST00000572270 U3KQ87 197 aa8.62□□□□□ -1.03
CCDC40-208ENST00000572270 IGHV3-38A0A0C4DH36 116 aa8.61□□□□□ -1.03
CCDC40-208ENST00000572270 E5RGE8 158 aa8.61□□□□□ -1.03
CCDC40-208ENST00000572270 J3KRW8 73 aa8.61□□□□□ -1.03
CCDC40-208ENST00000572270 K7EQD1 137 aa8.61□□□□□ -1.03
CCDC40-208ENST00000572270 ORM2P19652 201 aa8.61□□□□□ -1.03
CCDC40-208ENST00000572270 CXCL3P19876 107 aa8.61□□□□□ -1.03
CCDC40-208ENST00000572270 PRSS3P35030 304 aa8.61□□□□□ -1.03
CCDC40-208ENST00000572270 GPX4P36969 197 aaPredicted RBP8.61□□□□□ -1.03
CCDC40-208ENST00000572270 TMEM37Q8WXS4 190 aa8.61□□□□□ -1.03
CCDC40-208ENST00000572270 IL22RA2Q969J5 263 aa8.61□□□□□ -1.03
CCDC40-208ENST00000572270 RPUSD4Q96CM3 377 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms