RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 TMEM252Q8N6L7 170 aa4.95□□□□□ -1.62
CHD3-213ENST00000571249 LYPD6BQ8NI32 183 aa4.95□□□□□ -1.62
CHD3-213ENST00000571249 DAZAP1Q96EP5 407 aaKnown RBP4.95□□□□□ -1.62
CHD3-213ENST00000571249 SMIM8Q96KF7 97 aa4.95□□□□□ -1.62
CHD3-213ENST00000571249 CXorf58Q96LI9 332 aa4.95□□□□□ -1.62
CHD3-213ENST00000571249 AIFM2Q9BRQ8 373 aa4.95□□□□□ -1.62
CHD3-213ENST00000571249 IFI27L2Q9H2X8 130 aa4.95□□□□□ -1.62
CHD3-213ENST00000571249 WFDC1Q9HC57 220 aa4.95□□□□□ -1.62
CHD3-213ENST00000571249 CACFD1Q9UGQ2 172 aa4.95□□□□□ -1.62
CHD3-213ENST00000571249 BORCS7-ASMTA0A0B4J1R7 106 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 IGSF23A1L1A6 192 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 RAB19A4D1S5 217 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 LINC00473A8K010 186 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 TGOLN2O43493 480 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 SYNGR2O43760 224 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 S1PR2O95136 353 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 HPRT1P00492 218 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 SULT1A2P50226 295 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 POLR2GP62487 172 aaKnown RBP eCLIP4.94□□□□□ -1.62
CHD3-213ENST00000571249 POU2AF1Q16633 256 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 RNF212Q495C1 297 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 LBHQ53QV2 105 aaPredicted RBP4.94□□□□□ -1.62
CHD3-213ENST00000571249 CT45A1Q5HYN5 189 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 UQCC3Q6UW78 93 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 BTNL8Q6UX41 500 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 ZNF562Q6V9R5 426 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 SPAG16Q8N0X2 631 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 Q8NAQ8 132 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 CT45A3Q8NHU0 189 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 PCNPQ8WW12 178 aaKnown RBP4.94□□□□□ -1.62
CHD3-213ENST00000571249 USMG5Q96IX5 58 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 ADTRPQ96IZ2 230 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 TSNAXQ99598 290 aaKnown RBP4.94□□□□□ -1.62
CHD3-213ENST00000571249 ATG101Q9BSB4 218 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 MRPL20Q9BYC9 149 aaKnown RBP4.94□□□□□ -1.62
CHD3-213ENST00000571249 PARD6GQ9BYG4 376 aaPredicted RBP4.94□□□□□ -1.62
CHD3-213ENST00000571249 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.94□□□□□ -1.62
CHD3-213ENST00000571249 GNG12Q9UBI6 72 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 CACNG5Q9UF02 275 aa4.94□□□□□ -1.62
CHD3-213ENST00000571249 DNAH8Q96JB1 4490 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 TRAV25A0A0B4J276 109 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 IGHV4-28A0A0C4DH34 117 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 FAM24AA6NFZ4 105 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 KRBOX1C9JBD0 128 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 SSSCA1O60232 199 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 MED6O75586 246 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 CA2P00918 260 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 SULT1A1P50225 295 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 RAB5CP51148 216 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 AKR1C2P52895 323 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 BLOC1S1P78537 153 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 ZNF266Q14584 549 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 C12orf74Q32Q52 190 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 ODF3L2Q3SX64 289 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 FAM74A1Q5RGS3 127 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 FAM71F2Q6NXP2 309 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 TMEM14EPQ6UXP3 125 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 PUSL1Q8N0Z8 303 aaKnown RBP4.93□□□□□ -1.62
CHD3-213ENST00000571249 OR52E5Q8NH55 327 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 TMED6Q8WW62 240 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 MARC2Q969Z3 335 aa4.93□□□□□ -1.62
CHD3-213ENST00000571249 NBDYA0A0U1RRE5 68 aa4.92□□□□□ -1.62
CHD3-213ENST00000571249 TMEM213A2RRL7 107 aa4.92□□□□□ -1.62
CHD3-213ENST00000571249 PPP5D1E7EU14 171 aa4.92□□□□□ -1.62
CHD3-213ENST00000571249 TEX46H3BTG2 121 aa4.92□□□□□ -1.62
CHD3-213ENST00000571249 WRBO00258 174 aa4.92□□□□□ -1.62
CHD3-213ENST00000571249 DFFBO76075 338 aa4.92□□□□□ -1.62
CHD3-213ENST00000571249 CNN1P51911 297 aaKnown RBP4.92□□□□□ -1.62
CHD3-213ENST00000571249 UBE2KP61086 200 aa4.92□□□□□ -1.62
CHD3-213ENST00000571249 PJVKQ0ZLH3 352 aa4.92□□□□□ -1.62
CHD3-213ENST00000571249 FXYD3Q14802 87 aa4.92□□□□□ -1.62
CHD3-213ENST00000571249 ZNF833PQ6ZTB9 187 aa4.92□□□□□ -1.62
CHD3-213ENST00000571249 APRG1Q8IVJ8 170 aa4.92□□□□□ -1.62
CHD3-213ENST00000571249 OR1S2Q8NGQ3 325 aa4.92□□□□□ -1.62
CHD3-213ENST00000571249 RNASE11Q8TAA1 199 aaKnown RBP4.92□□□□□ -1.62
CHD3-213ENST00000571249 DEFB104AQ8WTQ1 72 aa4.92□□□□□ -1.62
CHD3-213ENST00000571249 TCTEX1D2Q8WW35 142 aa4.92□□□□□ -1.62
CHD3-213ENST00000571249 GNPNAT1Q96EK6 184 aaPredicted RBP4.92□□□□□ -1.62
CHD3-213ENST00000571249 CIB3Q96Q77 187 aaPredicted RBP4.92□□□□□ -1.62
CHD3-213ENST00000571249 SPAG8Q99932 426 aaPredicted RBP4.92□□□□□ -1.62
CHD3-213ENST00000571249 MAGT1Q9H0U3 335 aa4.92□□□□□ -1.62
CHD3-213ENST00000571249 METTL1Q9UBP6 276 aaKnown RBP4.92□□□□□ -1.62
CHD3-213ENST00000571249 DKK2Q9UBU2 259 aa4.92□□□□□ -1.62
CHD3-213ENST00000571249 PRELID3BQ9Y3B1 194 aa4.92□□□□□ -1.62
CHD3-213ENST00000571249 SAA2-SAA4A0A096LPE2 208 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.91□□□□□ -1.62
CHD3-213ENST00000571249 A0A1B0GW64 132 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 XKRY2A2RUG3 117 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 PMS2P5A8MQ11 134 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 UMAD1C9J7I0 102 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 M0R1X1 148 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 CA1P00915 261 aaPredicted RBP4.91□□□□□ -1.62
CHD3-213ENST00000571249 KRASP01116 189 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 SAA2P0DJI9 122 aaPredicted RBP4.91□□□□□ -1.62
CHD3-213ENST00000571249 NQO2P16083 231 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 G6PCP35575 357 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 LGALS7P47929 136 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 CAV2P51636 162 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 ATP5G2Q06055 141 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms