RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 SLC25A39Q9BZJ4 359 aaPredicted RBP6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 SLIRPQ9GZT3 109 aaKnown RBP6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 TMED3Q9Y3Q3 217 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 PKD1P98161 4303 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 TRAV8-2A0A0B4J237 113 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 PRSS46E5RG02 174 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 CRXO43186 299 aaPredicted RBP6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 SYNGR2O43760 224 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 MED6O75586 246 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 HTN1P15515 57 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 AZU1P20160 251 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 MEOX2P50222 304 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 PPP1R1AQ13522 171 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 OXA1LQ15070 435 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 RNF212Q495C1 297 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 PYDC2Q56P42 97 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 TMEM128Q5BJH2 165 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 SOHLH1Q5JUK2 328 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 ACOT7LQ6ZUV0 252 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 ZNF738Q8NE65 137 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 BPIFCQ8NFQ6 507 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 MCFD2Q8NI22 146 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 ATG101Q9BSB4 218 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 RABL2AQ9UBK7 228 aaPredicted RBP6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 RABL2BQ9UNT1 228 aa6.07□□□□□ -1.44
CTDNEP1-203ENST00000570385 F5H768 121 aa6.06□□□□□ -1.44
CTDNEP1-203ENST00000570385 H3BMQ9 156 aa6.06□□□□□ -1.44
CTDNEP1-203ENST00000570385 SFT2D2O95562 160 aa6.06□□□□□ -1.44
CTDNEP1-203ENST00000570385 NUDT3O95989 172 aa6.06□□□□□ -1.44
CTDNEP1-203ENST00000570385 INSP01308 110 aa6.06□□□□□ -1.44
CTDNEP1-203ENST00000570385 SNRPCP09234 159 aaKnown RBP6.06□□□□□ -1.44
CTDNEP1-203ENST00000570385 FAUP35544 74 aaKnown RBP6.06□□□□□ -1.44
CTDNEP1-203ENST00000570385 TMBIM6P55061 237 aa6.06□□□□□ -1.44
CTDNEP1-203ENST00000570385 RHOBP62745 196 aa6.06□□□□□ -1.44
CTDNEP1-203ENST00000570385 RPP30P78346 268 aaKnown RBP6.06□□□□□ -1.44
CTDNEP1-203ENST00000570385 HIST1H1AQ02539 215 aaPredicted RBP6.06□□□□□ -1.44
CTDNEP1-203ENST00000570385 TNP2Q05952 138 aa6.06□□□□□ -1.44
CTDNEP1-203ENST00000570385 SAMD13Q5VXD3 122 aa6.06□□□□□ -1.44
CTDNEP1-203ENST00000570385 TOMM5Q8N4H5 51 aa6.06□□□□□ -1.44
CTDNEP1-203ENST00000570385 TRIM63Q969Q1 353 aa6.06□□□□□ -1.44
CTDNEP1-203ENST00000570385 UHRF2Q96PU4 802 aa6.06□□□□□ -1.44
CTDNEP1-203ENST00000570385 CIB3Q96Q77 187 aaPredicted RBP6.06□□□□□ -1.44
CTDNEP1-203ENST00000570385 DUXBA0A1W2PPF3 345 aa6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 A8MTW9 85 aa6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 NOL3O60936 208 aaKnown RBP6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 ADAP1O75689 374 aa6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 CCNKO75909 580 aa6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 DUSP14O95147 198 aaKnown RBP6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 CFDP00746 253 aaPredicted RBP6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 IL5P05113 134 aa6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 OR5G3P0C626 314 aa6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 SLC25A6P12236 298 aa6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 RRAS2P62070 204 aaPredicted RBP6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 POLR2GP62487 172 aaKnown RBP eCLIP6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 CYP2G1PQ6ZSU1 146 aa6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 LRTM2Q8N967 370 aa6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 OR4D5Q8NGN0 318 aa6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 LINC01587Q99440 93 aa6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 PPP1R14DQ9NXH3 145 aa6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 SLC45A2Q9UMX9 530 aa6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 HIGD1AQ9Y241 93 aa6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 STRAPQ9Y3F4 350 aaKnown RBP6.05□□□□□ -1.44
CTDNEP1-203ENST00000570385 PLAC8L1A1L4L8 177 aa6.04□□□□□ -1.44
CTDNEP1-203ENST00000570385 LYRM9A8MSI8 78 aa6.04□□□□□ -1.44
CTDNEP1-203ENST00000570385 C16orf90A8MZG2 172 aa6.04□□□□□ -1.44
CTDNEP1-203ENST00000570385 H3BRN7 92 aa6.04□□□□□ -1.44
CTDNEP1-203ENST00000570385 BOLA2-SMG1P6H3BVE0 249 aa6.04□□□□□ -1.44
CTDNEP1-203ENST00000570385 LINC00869P0C866 280 aa6.04□□□□□ -1.44
CTDNEP1-203ENST00000570385 AP3S2P59780 193 aa6.04□□□□□ -1.44
CTDNEP1-203ENST00000570385 RAP2BP61225 183 aa6.04□□□□□ -1.44
CTDNEP1-203ENST00000570385 TMEM144Q7Z5S9 345 aa6.04□□□□□ -1.44
CTDNEP1-203ENST00000570385 C15orf53Q8NAA6 179 aa6.04□□□□□ -1.44
CTDNEP1-203ENST00000570385 LRRC20Q8TCA0 184 aa6.04□□□□□ -1.44
CTDNEP1-203ENST00000570385 GPR82Q96P67 336 aa6.04□□□□□ -1.44
CTDNEP1-203ENST00000570385 SHANK2-AS3Q9BTD1 123 aa6.04□□□□□ -1.44
CTDNEP1-203ENST00000570385 PARD6GQ9BYG4 376 aaPredicted RBP6.04□□□□□ -1.44
CTDNEP1-203ENST00000570385 PSENENQ9NZ42 101 aa6.04□□□□□ -1.44
CTDNEP1-203ENST00000570385 V9GYH0 126 aa6.04□□□□□ -1.44
CTDNEP1-203ENST00000570385 HSPG2P98160 4391 aa6.04□□□□□ -1.44
CTDNEP1-203ENST00000570385 PIGBOS1A0A0B4J2F0 54 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 NBDYA0A0U1RRE5 68 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 LINC00854A0A1B0GVQ3 168 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 H3BTX0 84 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 SSSCA1O60232 199 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 HYPMO75409 117 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 SCGB1D2O95969 90 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 ATP5G1P05496 136 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 METTL15P1P0C7V9 234 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 RPL7P18124 248 aaKnown RBP6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 CXCL3P19876 107 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 ANXA7P20073 488 aaKnown RBP6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 ATP5G3P48201 142 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 SLC38A11Q08AI6 406 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 KIR3DS1Q14943 382 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 PSG3Q16557 428 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 OR8A1Q8NGG7 326 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 ZNRF2Q8NHG8 242 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 RNF141Q8WVD5 230 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 BCL7BQ9BQE9 202 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 SLC25A21Q9BQT8 299 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms