RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 SMIM18P0DKX4 95 aa8.41□□□□□ -1.06
CAPN3-220ENST00000569827 CCL18P55774 89 aa8.41□□□□□ -1.06
CAPN3-220ENST00000569827 FAM3BP58499 235 aaPredicted RBP8.41□□□□□ -1.06
CAPN3-220ENST00000569827 HIST1H1AQ02539 215 aaPredicted RBP8.41□□□□□ -1.06
CAPN3-220ENST00000569827 ZNF738Q8NE65 137 aa8.41□□□□□ -1.06
CAPN3-220ENST00000569827 LINC01587Q99440 93 aa8.41□□□□□ -1.06
CAPN3-220ENST00000569827 PRRT1Q99946 306 aa8.41□□□□□ -1.06
CAPN3-220ENST00000569827 MCUBQ9NWR8 336 aa8.41□□□□□ -1.06
CAPN3-220ENST00000569827 A0A0J9YY99 117 aa8.4□□□□□ -1.06
CAPN3-220ENST00000569827 H3BP45 60 aa8.4□□□□□ -1.06
CAPN3-220ENST00000569827 BOLA2-SMG1P6H3BVE0 249 aa8.4□□□□□ -1.06
CAPN3-220ENST00000569827 ATP5G1P05496 136 aa8.4□□□□□ -1.06
CAPN3-220ENST00000569827 FABP1P07148 127 aa8.4□□□□□ -1.06
CAPN3-220ENST00000569827 SNRPCP09234 159 aaKnown RBP8.4□□□□□ -1.06
CAPN3-220ENST00000569827 ATP5G3P48201 142 aa8.4□□□□□ -1.06
CAPN3-220ENST00000569827 MEOX2P50222 304 aa8.4□□□□□ -1.06
CAPN3-220ENST00000569827 SSBP1Q04837 148 aaKnown RBP8.4□□□□□ -1.06
CAPN3-220ENST00000569827 CLINT1Q14677 625 aa8.4□□□□□ -1.06
CAPN3-220ENST00000569827 KIR3DS1Q14943 382 aa8.4□□□□□ -1.06
CAPN3-220ENST00000569827 SPCS2Q15005 226 aa8.4□□□□□ -1.06
CAPN3-220ENST00000569827 PARD6GQ9BYG4 376 aaPredicted RBP8.4□□□□□ -1.06
CAPN3-220ENST00000569827 KCNIP3Q9Y2W7 256 aa8.4□□□□□ -1.06
CAPN3-220ENST00000569827 FLG2Q5D862 2391 aaPredicted RBP8.39□□□□□ -1.07
CAPN3-220ENST00000569827 ANKRD20A5PA0PJZ0 165 aa8.39□□□□□ -1.07
CAPN3-220ENST00000569827 PRSS46E5RG02 174 aa8.39□□□□□ -1.07
CAPN3-220ENST00000569827 WRBO00258 174 aa8.39□□□□□ -1.07
CAPN3-220ENST00000569827 DUSP14O95147 198 aaKnown RBP8.39□□□□□ -1.07
CAPN3-220ENST00000569827 ALDH3B2P48448 385 aa8.39□□□□□ -1.07
CAPN3-220ENST00000569827 RAB11AP62491 216 aa8.39□□□□□ -1.07
CAPN3-220ENST00000569827 RHOBP62745 196 aa8.39□□□□□ -1.07
CAPN3-220ENST00000569827 AKR1C1Q04828 323 aa8.39□□□□□ -1.07
CAPN3-220ENST00000569827 OR5I1Q13606 314 aa8.39□□□□□ -1.07
CAPN3-220ENST00000569827 TMED4Q7Z7H5 227 aa8.39□□□□□ -1.07
CAPN3-220ENST00000569827 C15orf40Q8WUR7 153 aa8.39□□□□□ -1.07
CAPN3-220ENST00000569827 DIRAS2Q96HU8 199 aa8.39□□□□□ -1.07
CAPN3-220ENST00000569827 TMEM147Q9BVK8 224 aa8.39□□□□□ -1.07
CAPN3-220ENST00000569827 NOP10Q9NPE3 64 aaKnown RBP8.39□□□□□ -1.07
CAPN3-220ENST00000569827 TRAV26-1A0A087WT03 109 aa8.38□□□□□ -1.07
CAPN3-220ENST00000569827 SMCO3A2RU48 225 aa8.38□□□□□ -1.07
CAPN3-220ENST00000569827 H3BRN7 92 aa8.38□□□□□ -1.07
CAPN3-220ENST00000569827 PITX3O75364 302 aa8.38□□□□□ -1.07
CAPN3-220ENST00000569827 MRPS10P82664 201 aaKnown RBP8.38□□□□□ -1.07
CAPN3-220ENST00000569827 ACOT7LQ6ZUV0 252 aa8.38□□□□□ -1.07
CAPN3-220ENST00000569827 GPR141Q7Z602 305 aa8.38□□□□□ -1.07
CAPN3-220ENST00000569827 BPIFCQ8NFQ6 507 aa8.38□□□□□ -1.07
CAPN3-220ENST00000569827 Q9H8V8 135 aa8.38□□□□□ -1.07
CAPN3-220ENST00000569827 CBY3A6NI87 242 aa8.37□□□□□ -1.07
CAPN3-220ENST00000569827 J3KRW8 73 aa8.37□□□□□ -1.07
CAPN3-220ENST00000569827 CCNKO75909 580 aa8.37□□□□□ -1.07
CAPN3-220ENST00000569827 HOXA5P20719 270 aa8.37□□□□□ -1.07
CAPN3-220ENST00000569827 TSPOP30536 169 aa8.37□□□□□ -1.07
CAPN3-220ENST00000569827 SPANXN5Q5MJ07 72 aa8.37□□□□□ -1.07
CAPN3-220ENST00000569827 SAMD13Q5VXD3 122 aa8.37□□□□□ -1.07
CAPN3-220ENST00000569827 GGNBP1Q5YKI7 109 aa8.37□□□□□ -1.07
CAPN3-220ENST00000569827 PPP1R14DQ9NXH3 145 aa8.37□□□□□ -1.07
CAPN3-220ENST00000569827 CACFD1Q9UGQ2 172 aa8.37□□□□□ -1.07
CAPN3-220ENST00000569827 SCP2D1Q9UJQ7 156 aa8.37□□□□□ -1.07
CAPN3-220ENST00000569827 MYCBP2O75592 4640 aa8.37□□□□□ -1.07
CAPN3-220ENST00000569827 VPS13BQ7Z7G8 4022 aa8.36□□□□□ -1.07
CAPN3-220ENST00000569827 H3BTX0 84 aa8.36□□□□□ -1.07
CAPN3-220ENST00000569827 CTDSPLO15194 276 aa8.36□□□□□ -1.07
CAPN3-220ENST00000569827 HOXB5P09067 269 aa8.36□□□□□ -1.07
CAPN3-220ENST00000569827 ANXA3P12429 323 aa8.36□□□□□ -1.07
CAPN3-220ENST00000569827 VAMP1P23763 118 aa8.36□□□□□ -1.07
CAPN3-220ENST00000569827 OR8A1Q8NGG7 326 aa8.36□□□□□ -1.07
CAPN3-220ENST00000569827 GNPNAT1Q96EK6 184 aaPredicted RBP8.36□□□□□ -1.07
CAPN3-220ENST00000569827 C16orf74Q96GX8 76 aa8.36□□□□□ -1.07
CAPN3-220ENST00000569827 ZNF586Q9NXT0 402 aa8.36□□□□□ -1.07
CAPN3-220ENST00000569827 GAGE12BA1L429 117 aa8.35□□□□□ -1.07
CAPN3-220ENST00000569827 ZNF701M0R085 212 aaPredicted RBP8.35□□□□□ -1.07
CAPN3-220ENST00000569827 SYNGR2O43760 224 aa8.35□□□□□ -1.07
CAPN3-220ENST00000569827 GAGE7O76087 117 aa8.35□□□□□ -1.07
CAPN3-220ENST00000569827 OR5G3P0C626 314 aa8.35□□□□□ -1.07
CAPN3-220ENST00000569827 GAGE12FP0CL80 117 aa8.35□□□□□ -1.07
CAPN3-220ENST00000569827 GAGE12GP0CL81 117 aa8.35□□□□□ -1.07
CAPN3-220ENST00000569827 GAGE12IP0CL82 117 aa8.35□□□□□ -1.07
CAPN3-220ENST00000569827 CXCL3P19876 107 aa8.35□□□□□ -1.07
CAPN3-220ENST00000569827 TAS2R60P59551 318 aa8.35□□□□□ -1.07
CAPN3-220ENST00000569827 SRPXP78539 464 aa8.35□□□□□ -1.07
CAPN3-220ENST00000569827 ESRGQ1W209 222 aa8.35□□□□□ -1.07
CAPN3-220ENST00000569827 CYP2G1PQ6ZSU1 146 aa8.35□□□□□ -1.07
CAPN3-220ENST00000569827 TMEM144Q7Z5S9 345 aa8.35□□□□□ -1.07
CAPN3-220ENST00000569827 OR4D5Q8NGN0 318 aa8.35□□□□□ -1.07
CAPN3-220ENST00000569827 RNASE8Q8TDE3 154 aaKnown RBP8.35□□□□□ -1.07
CAPN3-220ENST00000569827 SHANK2-AS3Q9BTD1 123 aa8.35□□□□□ -1.07
CAPN3-220ENST00000569827 HIGD1AQ9Y241 93 aa8.35□□□□□ -1.07
CAPN3-220ENST00000569827 TIMM8BQ9Y5J9 83 aaPredicted RBP8.35□□□□□ -1.07
CAPN3-220ENST00000569827 IL5P05113 134 aa8.34□□□□□ -1.07
CAPN3-220ENST00000569827 LINC00869P0C866 280 aa8.34□□□□□ -1.07
CAPN3-220ENST00000569827 ATP5IP56385 69 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-220ENST00000569827 B2MP61769 119 aa8.34□□□□□ -1.07
CAPN3-220ENST00000569827 RRAS2P62070 204 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-220ENST00000569827 PSG3Q16557 428 aa8.34□□□□□ -1.07
CAPN3-220ENST00000569827 LRRC20Q8TCA0 184 aa8.34□□□□□ -1.07
CAPN3-220ENST00000569827 RPUSD4Q96CM3 377 aaKnown RBP8.34□□□□□ -1.07
CAPN3-220ENST00000569827 GPR82Q96P67 336 aa8.34□□□□□ -1.07
CAPN3-220ENST00000569827 SCGB3A2Q96PL1 93 aa8.34□□□□□ -1.07
CAPN3-220ENST00000569827 Q9H3A6 140 aa8.34□□□□□ -1.07
CAPN3-220ENST00000569827 SLC45A2Q9UMX9 530 aa8.34□□□□□ -1.07
CAPN3-220ENST00000569827 PRAC2D3DTV9 90 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms