RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 GNPNAT1Q96EK6 184 aaPredicted RBP7.04□□□□□ -1.28
UBR1-210ENST00000569337 RCHY1Q96PM5 261 aa7.04□□□□□ -1.28
UBR1-210ENST00000569337 METTL26Q96S19 204 aa7.04□□□□□ -1.28
UBR1-210ENST00000569337 SHANK2-AS3Q9BTD1 123 aa7.04□□□□□ -1.28
UBR1-210ENST00000569337 SCRT1Q9BWW7 348 aa7.04□□□□□ -1.28
UBR1-210ENST00000569337 SLC25A39Q9BZJ4 359 aaPredicted RBP7.04□□□□□ -1.28
UBR1-210ENST00000569337 SEPSECSQ9HD40 501 aaKnown RBP7.04□□□□□ -1.28
UBR1-210ENST00000569337 DNAJC4Q9NNZ3 241 aa7.04□□□□□ -1.28
UBR1-210ENST00000569337 MLXQ9UH92 298 aa7.04□□□□□ -1.28
UBR1-210ENST00000569337 RABAC1Q9UI14 185 aa7.04□□□□□ -1.28
UBR1-210ENST00000569337 HIGD1AQ9Y241 93 aa7.04□□□□□ -1.28
UBR1-210ENST00000569337 ZNF98A6NK75 572 aa7.03□□□□□ -1.28
UBR1-210ENST00000569337 H3BRN7 92 aa7.03□□□□□ -1.28
UBR1-210ENST00000569337 BUB3O43684 328 aa7.03□□□□□ -1.28
UBR1-210ENST00000569337 COX7A2P2O60397 106 aa7.03□□□□□ -1.28
UBR1-210ENST00000569337 CD7P09564 240 aa7.03□□□□□ -1.28
UBR1-210ENST00000569337 TPT1P13693 172 aaKnown RBP7.03□□□□□ -1.28
UBR1-210ENST00000569337 FHITP49789 147 aa7.03□□□□□ -1.28
UBR1-210ENST00000569337 SERF2P84101 59 aa7.03□□□□□ -1.28
UBR1-210ENST00000569337 PXDC1Q5TGL8 231 aa7.03□□□□□ -1.28
UBR1-210ENST00000569337 RBPMS2Q6ZRY4 209 aaKnown RBP7.03□□□□□ -1.28
UBR1-210ENST00000569337 MIR17HGQ75NE6 70 aa7.03□□□□□ -1.28
UBR1-210ENST00000569337 SSX7Q7RTT5 188 aa7.03□□□□□ -1.28
UBR1-210ENST00000569337 LINC00305Q7Z4B0 112 aa7.03□□□□□ -1.28
UBR1-210ENST00000569337 TMEM61Q8N0U2 210 aa7.03□□□□□ -1.28
UBR1-210ENST00000569337 RNF2Q99496 336 aa7.03□□□□□ -1.28
UBR1-210ENST00000569337 RHPN1-AS1Q9BWJ2 59 aa7.03□□□□□ -1.28
UBR1-210ENST00000569337 KCNIP2Q9NS61 270 aa7.03□□□□□ -1.28
UBR1-210ENST00000569337 RPRMQ9NS64 109 aa7.03□□□□□ -1.28
UBR1-210ENST00000569337 COL7A1Q02388 2944 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 TRAV25A0A0B4J276 109 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 OR11H12B2RN74 326 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 SEC11BP0C7V7 166 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 M6PRP20645 277 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 ZNF726P1Q15940 193 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 HAGHQ16775 308 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 FAM78BQ5VT40 261 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 C16orf54Q6UWD8 224 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 RPP25LQ8N5L8 163 aaKnown RBP7.02□□□□□ -1.29
UBR1-210ENST00000569337 DEFB125Q8N687 156 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 OR10G4Q8NGN3 311 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 OR10G9Q8NGN4 311 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 OR10G7Q8NGN6 311 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 OR1L4Q8NGR5 311 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 GATAD1Q8WUU5 269 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 GLMPQ8WWB7 406 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 FAM167A-AS1Q96KT0 104 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 C17orf77Q96MU5 243 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 PFDN5Q99471 154 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 TM2D3Q9BRN9 247 aa7.02□□□□□ -1.29
UBR1-210ENST00000569337 ELOA3CA0A087WX78 387 aaPredicted RBP7.01□□□□□ -1.29
UBR1-210ENST00000569337 MRPS12O15235 138 aaKnown RBP7.01□□□□□ -1.29
UBR1-210ENST00000569337 C4BPBP20851 252 aa7.01□□□□□ -1.29
UBR1-210ENST00000569337 EIF5AP63241 154 aaKnown RBP7.01□□□□□ -1.29
UBR1-210ENST00000569337 ACOT6Q3I5F7 207 aaPredicted RBP7.01□□□□□ -1.29
UBR1-210ENST00000569337 TMEM41BQ5BJD5 291 aa7.01□□□□□ -1.29
UBR1-210ENST00000569337 FAM74A1Q5RGS3 127 aa7.01□□□□□ -1.29
UBR1-210ENST00000569337 FAM90A2PQ658T7 463 aa7.01□□□□□ -1.29
UBR1-210ENST00000569337 FAM122CQ6P4D5 195 aa7.01□□□□□ -1.29
UBR1-210ENST00000569337 ALKAL2Q6UX46 152 aa7.01□□□□□ -1.29
UBR1-210ENST00000569337 ZNF503Q96F45 646 aa7.01□□□□□ -1.29
UBR1-210ENST00000569337 SPATA25Q9BR10 227 aa7.01□□□□□ -1.29
UBR1-210ENST00000569337 SLC25A2Q9BXI2 301 aa7.01□□□□□ -1.29
UBR1-210ENST00000569337 SRD5A3Q9H8P0 318 aa7.01□□□□□ -1.29
UBR1-210ENST00000569337 SLC25A22Q9H936 323 aa7.01□□□□□ -1.29
UBR1-210ENST00000569337 FUT9Q9Y231 359 aa7.01□□□□□ -1.29
UBR1-210ENST00000569337 HMGB3O15347 200 aaKnown RBP7□□□□□ -1.29
UBR1-210ENST00000569337 SNRPCP09234 159 aaKnown RBP7□□□□□ -1.29
UBR1-210ENST00000569337 RHOBP62745 196 aa7□□□□□ -1.29
UBR1-210ENST00000569337 AKR1C8PQ5T2L2 129 aa7□□□□□ -1.29
UBR1-210ENST00000569337 RAB24Q969Q5 203 aa7□□□□□ -1.29
UBR1-210ENST00000569337 SPAG8Q99932 426 aaPredicted RBP7□□□□□ -1.29
UBR1-210ENST00000569337 MRPL32Q9BYC8 188 aaKnown RBP7□□□□□ -1.29
UBR1-210ENST00000569337 WFDC10AQ9H1F0 79 aa7□□□□□ -1.29
UBR1-210ENST00000569337 AGRNO00468 2067 aa7□□□□□ -1.29
UBR1-210ENST00000569337 A0A1W2PS18 150 aa6.99□□□□□ -1.29
UBR1-210ENST00000569337 TSPAN4O14817 238 aa6.99□□□□□ -1.29
UBR1-210ENST00000569337 MBP02144 154 aa6.99□□□□□ -1.29
UBR1-210ENST00000569337 PYYP10082 97 aa6.99□□□□□ -1.29
UBR1-210ENST00000569337 CDC34P49427 236 aaPredicted RBP6.99□□□□□ -1.29
UBR1-210ENST00000569337 SULT1A2P50226 295 aa6.99□□□□□ -1.29
UBR1-210ENST00000569337 C1orf194Q5T5A4 169 aa6.99□□□□□ -1.29
UBR1-210ENST00000569337 SIGLEC15Q6ZMC9 328 aa6.99□□□□□ -1.29
UBR1-210ENST00000569337 LINC00322Q6ZN03 302 aaPredicted RBP6.99□□□□□ -1.29
UBR1-210ENST00000569337 TCF24Q7RTU0 167 aa6.99□□□□□ -1.29
UBR1-210ENST00000569337 OR8I2Q8N0Y5 310 aa6.99□□□□□ -1.29
UBR1-210ENST00000569337 IGKV3-7A0A075B6H7 116 aa6.98□□□□□ -1.29
UBR1-210ENST00000569337 CTXND1A0A1B0GTU2 59 aa6.98□□□□□ -1.29
UBR1-210ENST00000569337 A0A1W2PPV4 95 aa6.98□□□□□ -1.29
UBR1-210ENST00000569337 RBMY1BA6NDE4 496 aaKnown RBP6.98□□□□□ -1.29
UBR1-210ENST00000569337 RBMY1EA6NEQ0 496 aaKnown RBP6.98□□□□□ -1.29
UBR1-210ENST00000569337 OR4C46A6NHA9 309 aa6.98□□□□□ -1.29
UBR1-210ENST00000569337 UMAD1C9J7I0 102 aa6.98□□□□□ -1.29
UBR1-210ENST00000569337 C3orf84H3BNL1 204 aa6.98□□□□□ -1.29
UBR1-210ENST00000569337 H3BQ15 152 aa6.98□□□□□ -1.29
UBR1-210ENST00000569337 H3BTX0 84 aa6.98□□□□□ -1.29
UBR1-210ENST00000569337 RBMY1DP0C7P1 496 aaKnown RBP6.98□□□□□ -1.29
UBR1-210ENST00000569337 STAG3L2P0CL84 134 aa6.98□□□□□ -1.29
UBR1-210ENST00000569337 STAG3L3P0CL85 134 aa6.98□□□□□ -1.29
UBR1-210ENST00000569337 IGLC2P0DOY2 106 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms