RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 NPPCP23582 126 aa7.92□□□□□ -1.14
CDH3-210ENST00000569117 BMI1P35226 326 aa7.92□□□□□ -1.14
CDH3-210ENST00000569117 RAB2AP61019 212 aa7.92□□□□□ -1.14
CDH3-210ENST00000569117 TMEM41BQ5BJD5 291 aa7.92□□□□□ -1.14
CDH3-210ENST00000569117 NARS2Q96I59 477 aaKnown RBP7.92□□□□□ -1.14
CDH3-210ENST00000569117 UHRF2Q96PU4 802 aa7.92□□□□□ -1.14
CDH3-210ENST00000569117 RNF2Q99496 336 aa7.92□□□□□ -1.14
CDH3-210ENST00000569117 SCRT1Q9BWW7 348 aa7.92□□□□□ -1.14
CDH3-210ENST00000569117 MRPL32Q9BYC8 188 aaKnown RBP7.92□□□□□ -1.14
CDH3-210ENST00000569117 SLC25A39Q9BZJ4 359 aaPredicted RBP7.92□□□□□ -1.14
CDH3-210ENST00000569117 TMEM231Q9H6L2 316 aa7.92□□□□□ -1.14
CDH3-210ENST00000569117 VSIRQ9H7M9 311 aa7.92□□□□□ -1.14
CDH3-210ENST00000569117 DNAJC4Q9NNZ3 241 aa7.92□□□□□ -1.14
CDH3-210ENST00000569117 A0A1W2PS18 150 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 SEC14L6B5MCN3 397 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 BUB3O43684 328 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 CSN3P07498 182 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 FOLR2P14207 255 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 GYPEP15421 78 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 CBLN1P23435 193 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 RHOBP62745 196 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 AKR1C8PQ5T2L2 129 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 C1orf194Q5T5A4 169 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 MORN5Q5VZ52 161 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 ADAMTSL5Q6ZMM2 481 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 LINC00305Q7Z4B0 112 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 WFDC9Q8NEX5 89 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 OR10G4Q8NGN3 311 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 OR10G9Q8NGN4 311 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 OR10G7Q8NGN6 311 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 GLMPQ8WWB7 406 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 ELOVL1Q9BW60 279 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 SEPSECSQ9HD40 501 aaKnown RBP7.91□□□□□ -1.14
CDH3-210ENST00000569117 RPRMQ9NS64 109 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 TECRQ9NZ01 308 aaKnown RBP7.91□□□□□ -1.14
CDH3-210ENST00000569117 SMPXQ9UHP9 88 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 RNF24Q9Y225 148 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 FUT9Q9Y231 359 aa7.91□□□□□ -1.14
CDH3-210ENST00000569117 TRRAPQ9Y4A5 3859 aa7.9□□□□□ -1.14
CDH3-210ENST00000569117 IGHV3-49A0A0A0MS15 119 aa7.9□□□□□ -1.14
CDH3-210ENST00000569117 ZNF98A6NK75 572 aa7.9□□□□□ -1.14
CDH3-210ENST00000569117 CHEK1O14757 476 aa7.9□□□□□ -1.14
CDH3-210ENST00000569117 APOHP02749 345 aaPredicted RBP7.9□□□□□ -1.14
CDH3-210ENST00000569117 CDC34P49427 236 aaPredicted RBP7.9□□□□□ -1.14
CDH3-210ENST00000569117 RAB5CP51148 216 aa7.9□□□□□ -1.14
CDH3-210ENST00000569117 FAM78BQ5VT40 261 aa7.9□□□□□ -1.14
CDH3-210ENST00000569117 DPPA3Q6W0C5 159 aa7.9□□□□□ -1.14
CDH3-210ENST00000569117 RPP25LQ8N5L8 163 aaKnown RBP7.9□□□□□ -1.14
CDH3-210ENST00000569117 GRAMD2BQ96HH9 432 aa7.9□□□□□ -1.14
CDH3-210ENST00000569117 RHPN1-AS1Q9BWJ2 59 aa7.9□□□□□ -1.14
CDH3-210ENST00000569117 MLXQ9UH92 298 aa7.9□□□□□ -1.14
CDH3-210ENST00000569117 IGHV3OR16-13A0A075B7E8 117 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 A0A087WWL8 130 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 IGHV3-74A0A0B4J1X5 117 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 A0A1W2PPV4 95 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 SAP30O75446 220 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 SULT1A2P50226 295 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 KHDC3LQ587J8 217 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 PRR31Q5SQ13 230 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 SPATA31B1PQ5VZV4 182 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 LEMD1Q68G75 181 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 FAM122CQ6P4D5 195 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 C16orf54Q6UWD8 224 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 TEX261Q6UWH6 196 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 ALKAL2Q6UX46 152 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 MIR17HGQ75NE6 70 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 DYNLRB2Q8TF09 96 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 GPR82Q96P67 336 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 MCRIP2Q9BUT9 160 aaKnown RBP7.89□□□□□ -1.15
CDH3-210ENST00000569117 SLC25A2Q9BXI2 301 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 ACTR3CQ9C0K3 210 aaPredicted RBP7.89□□□□□ -1.15
CDH3-210ENST00000569117 SLC25A22Q9H936 323 aa7.89□□□□□ -1.15
CDH3-210ENST00000569117 IGHV3-66A0A0C4DH42 116 aa7.88□□□□□ -1.15
CDH3-210ENST00000569117 CTXND1A0A1B0GTU2 59 aa7.88□□□□□ -1.15
CDH3-210ENST00000569117 MRPS12O15235 138 aaKnown RBP7.88□□□□□ -1.15
CDH3-210ENST00000569117 CD5P06127 495 aa7.88□□□□□ -1.15
CDH3-210ENST00000569117 GP9P14770 177 aa7.88□□□□□ -1.15
CDH3-210ENST00000569117 RPL7P18124 248 aaKnown RBP7.88□□□□□ -1.15
CDH3-210ENST00000569117 BTF3P20290 206 aaKnown RBP7.88□□□□□ -1.15
CDH3-210ENST00000569117 INSL3P51460 131 aa7.88□□□□□ -1.15
CDH3-210ENST00000569117 TAS2R45P59539 299 aa7.88□□□□□ -1.15
CDH3-210ENST00000569117 ZNF726P1Q15940 193 aa7.88□□□□□ -1.15
CDH3-210ENST00000569117 FAM74A1Q5RGS3 127 aa7.88□□□□□ -1.15
CDH3-210ENST00000569117 C9orf66Q5T8R8 295 aa7.88□□□□□ -1.15
CDH3-210ENST00000569117 SSX7Q7RTT5 188 aa7.88□□□□□ -1.15
CDH3-210ENST00000569117 OR8I2Q8N0Y5 310 aa7.88□□□□□ -1.15
CDH3-210ENST00000569117 OR2K2Q8NGT1 345 aa7.88□□□□□ -1.15
CDH3-210ENST00000569117 FAM167A-AS1Q96KT0 104 aa7.88□□□□□ -1.15
CDH3-210ENST00000569117 TMEM14CQ9P0S9 112 aa7.88□□□□□ -1.15
CDH3-210ENST00000569117 HELTA6NFD8 242 aa7.87□□□□□ -1.15
CDH3-210ENST00000569117 IGLV1-51P01701 117 aa7.87□□□□□ -1.15
CDH3-210ENST00000569117 STAG3L2P0CL84 134 aa7.87□□□□□ -1.15
CDH3-210ENST00000569117 STAG3L3P0CL85 134 aa7.87□□□□□ -1.15
CDH3-210ENST00000569117 FHITP49789 147 aa7.87□□□□□ -1.15
CDH3-210ENST00000569117 DEFB114Q30KQ6 69 aa7.87□□□□□ -1.15
CDH3-210ENST00000569117 FAM90A2PQ658T7 463 aa7.87□□□□□ -1.15
CDH3-210ENST00000569117 SIGLEC15Q6ZMC9 328 aa7.87□□□□□ -1.15
CDH3-210ENST00000569117 BPIFA4PQ86YQ2 179 aa7.87□□□□□ -1.15
CDH3-210ENST00000569117 ZNF680Q8NEM1 530 aa7.87□□□□□ -1.15
CDH3-210ENST00000569117 STXBP6Q8NFX7 210 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms