RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 UHRF2Q96PU4 802 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 NEU1Q99519 415 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 SEC22CQ9BRL7 303 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 TMEM147Q9BVK8 224 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 SLC25A39Q9BZJ4 359 aaPredicted RBP5.62□□□□□ -1.51
CDH3-209ENST00000569080 SLC35B3Q9H1N7 401 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 SLC25A22Q9H936 323 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 DOK5Q9P104 306 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 DNAH17Q9UFH2 4485 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 A0A087X0K7 114 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 SMCO3A2RU48 225 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 C11orf94C9JXX5 98 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 MRPS12O15235 138 aaKnown RBP5.61□□□□□ -1.51
CDH3-209ENST00000569080 DEDDO75618 318 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 IGKV3-20P01619 116 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 IL5P05113 134 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 ID1P41134 155 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 GALR1P47211 349 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 FXYD7P58549 80 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 SELENOTP62341 195 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 PRR20EP86478 221 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 PRR20CP86479 221 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 PRR20DP86480 221 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 PRR20BP86481 221 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 PRR20AP86496 221 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 SLC38A11Q08AI6 406 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 IL15RAQ13261 267 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 C12orf74Q32Q52 190 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 FAM78BQ5VT40 261 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 SPATA31B1PQ5VZV4 182 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 C1orf158Q8N1D5 194 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 ZNF431Q8TF32 576 aaPredicted RBP5.61□□□□□ -1.51
CDH3-209ENST00000569080 C2CD4CQ8TF44 421 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 GPR82Q96P67 336 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 MGST2Q99735 147 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 RSG1Q9BU20 258 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 APLNQ9ULZ1 77 aa5.61□□□□□ -1.51
CDH3-209ENST00000569080 HYPMO75409 117 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 AMBPP02760 352 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 TCTAP57738 103 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 PSG9Q00887 426 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 ASAH1Q13510 395 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 MORN5Q5VZ52 161 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 IGFL4Q6B9Z1 124 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 TEPPQ6URK8 271 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 ZNF546Q86UE3 836 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 RNF182Q8N6D2 247 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 OR10P1Q8NGE3 313 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 C16orf92Q96LL3 132 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 GGACTQ9BVM4 153 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 NPVFQ9HCQ7 196 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 RPRMQ9NS64 109 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 GSKIPQ9P0R6 139 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 HIGD1AQ9Y241 93 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 KIAA1109Q2LD37 5005 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 PKHD1P08F94 4074 aa5.6□□□□□ -1.51
CDH3-209ENST00000569080 IGHV4-4A0A075B6R2 117 aa5.59□□□□□ -1.51
CDH3-209ENST00000569080 TRAV10A0A0B4J240 114 aa5.59□□□□□ -1.51
CDH3-209ENST00000569080 A6NHS1 94 aa5.59□□□□□ -1.51
CDH3-209ENST00000569080 AGPAT2O15120 278 aa5.59□□□□□ -1.51
CDH3-209ENST00000569080 CRXO43186 299 aaPredicted RBP5.59□□□□□ -1.51
CDH3-209ENST00000569080 H2AFB2P0C5Z0 115 aa5.59□□□□□ -1.51
CDH3-209ENST00000569080 RPL7P18124 248 aaKnown RBP5.59□□□□□ -1.51
CDH3-209ENST00000569080 CXCL3P19876 107 aa5.59□□□□□ -1.51
CDH3-209ENST00000569080 CNN1P51911 297 aaKnown RBP5.59□□□□□ -1.51
CDH3-209ENST00000569080 RAP2BP61225 183 aa5.59□□□□□ -1.51
CDH3-209ENST00000569080 IFITM3Q01628 133 aa5.59□□□□□ -1.51
CDH3-209ENST00000569080 VWC2Q2TAL6 325 aa5.59□□□□□ -1.51
CDH3-209ENST00000569080 EBLN2Q6P2I7 272 aa5.59□□□□□ -1.51
CDH3-209ENST00000569080 ZNF767PQ75MW2 155 aa5.59□□□□□ -1.51
CDH3-209ENST00000569080 C12orf45Q8N5I9 185 aaPredicted RBP5.59□□□□□ -1.51
CDH3-209ENST00000569080 OR11H7Q8NGC8 314 aa5.59□□□□□ -1.51
CDH3-209ENST00000569080 OR4B1Q8NGF8 309 aa5.59□□□□□ -1.51
CDH3-209ENST00000569080 TMEM37Q8WXS4 190 aa5.59□□□□□ -1.51
CDH3-209ENST00000569080 ARL6Q9H0F7 186 aa5.59□□□□□ -1.51
CDH3-209ENST00000569080 ARV1Q9H2C2 271 aa5.59□□□□□ -1.51
CDH3-209ENST00000569080 MGAT4CQ9UBM8 478 aa5.59□□□□□ -1.51
CDH3-209ENST00000569080 LSM5Q9Y4Y9 91 aaKnown RBP5.59□□□□□ -1.51
CDH3-209ENST00000569080 IGSF23A1L1A6 192 aa5.58□□□□□ -1.52
CDH3-209ENST00000569080 SMIM9A6NGZ8 99 aa5.58□□□□□ -1.52
CDH3-209ENST00000569080 FAM25EA8MYX2 175 aa5.58□□□□□ -1.52
CDH3-209ENST00000569080 IGLL5B9A064 214 aa5.58□□□□□ -1.52
CDH3-209ENST00000569080 UPK1BO75841 260 aa5.58□□□□□ -1.52
CDH3-209ENST00000569080 OR5G3P0C626 314 aa5.58□□□□□ -1.52
CDH3-209ENST00000569080 IGLC2P0DOY2 106 aa5.58□□□□□ -1.52
CDH3-209ENST00000569080 ZNF846Q147U1 533 aa5.58□□□□□ -1.52
CDH3-209ENST00000569080 PXDC1Q5TGL8 231 aa5.58□□□□□ -1.52
CDH3-209ENST00000569080 S100ZQ8WXG8 99 aa5.58□□□□□ -1.52
CDH3-209ENST00000569080 C2orf50Q96LR7 162 aa5.58□□□□□ -1.52
CDH3-209ENST00000569080 IGF2BP2-AS1Q96M15 143 aa5.58□□□□□ -1.52
CDH3-209ENST00000569080 RNF126Q9BV68 326 aa5.58□□□□□ -1.52
CDH3-209ENST00000569080 LYRM2Q9NU23 88 aaPredicted RBP5.58□□□□□ -1.52
CDH3-209ENST00000569080 DKK2Q9UBU2 259 aa5.58□□□□□ -1.52
CDH3-209ENST00000569080 WDR83OSQ9Y284 106 aa5.58□□□□□ -1.52
CDH3-209ENST00000569080 RFNGQ9Y644 331 aa5.58□□□□□ -1.52
CDH3-209ENST00000569080 IGHV3OR16-12A0A075B7B8 117 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 DEFB131BA0A096LNP1 70 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 FAM240BA0A1B0GVZ2 78 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 PLAC8L1A1L4L8 177 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 TMEM189A5PLL7 270 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms