RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 OR4C46A6NHA9 309 aa12.54□□□□□ -0.4
COMMD4-224ENST00000568877 DNASE2O00115 360 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-224ENST00000568877 PFDN1O60925 122 aa12.54□□□□□ -0.4
COMMD4-224ENST00000568877 TFPI2P48307 235 aa12.54□□□□□ -0.4
COMMD4-224ENST00000568877 MORN5Q5VZ52 161 aa12.54□□□□□ -0.4
COMMD4-224ENST00000568877 GTSCR1Q86UQ5 136 aa12.54□□□□□ -0.4
COMMD4-224ENST00000568877 STXBP6Q8NFX7 210 aa12.54□□□□□ -0.4
COMMD4-224ENST00000568877 GNPNAT1Q96EK6 184 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-224ENST00000568877 GPR82Q96P67 336 aa12.54□□□□□ -0.4
COMMD4-224ENST00000568877 PSMG3Q9BT73 122 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-224ENST00000568877 NBEAL1Q6ZS30 2694 aa12.54□□□□□ -0.4
COMMD4-224ENST00000568877 TRAV2A0A0B4J234 112 aa12.53□□□□□ -0.4
COMMD4-224ENST00000568877 RPL7P18124 248 aaKnown RBP12.53□□□□□ -0.4
COMMD4-224ENST00000568877 GALR1P47211 349 aa12.53□□□□□ -0.4
COMMD4-224ENST00000568877 DEFA6Q01524 100 aa12.53□□□□□ -0.4
COMMD4-224ENST00000568877 FAM78BQ5VT40 261 aa12.53□□□□□ -0.4
COMMD4-224ENST00000568877 WFDC3Q8IUB2 231 aa12.53□□□□□ -0.4
COMMD4-224ENST00000568877 OR2G3Q8NGZ4 309 aa12.53□□□□□ -0.4
COMMD4-224ENST00000568877 CD7P09564 240 aa12.52□□□□□ -0.41
COMMD4-224ENST00000568877 CD81P60033 236 aa12.52□□□□□ -0.41
COMMD4-224ENST00000568877 SERF2P84101 59 aa12.52□□□□□ -0.41
COMMD4-224ENST00000568877 ACOT6Q3I5F7 207 aaPredicted RBP12.52□□□□□ -0.41
COMMD4-224ENST00000568877 Q8N1Y9 231 aa12.52□□□□□ -0.41
COMMD4-224ENST00000568877 ZNF471Q9BX82 626 aaPredicted RBP12.52□□□□□ -0.41
COMMD4-224ENST00000568877 SH3BGRL3Q9H299 93 aa12.52□□□□□ -0.41
COMMD4-224ENST00000568877 SEPSECSQ9HD40 501 aaKnown RBP12.52□□□□□ -0.41
COMMD4-224ENST00000568877 NRN1Q9NPD7 142 aa12.52□□□□□ -0.41
COMMD4-224ENST00000568877 SMAD5-AS1Q9Y6J3 95 aa12.52□□□□□ -0.41
COMMD4-224ENST00000568877 TRAV5A0A0B4J249 113 aa12.51□□□□□ -0.41
COMMD4-224ENST00000568877 K7EQG2 157 aa12.51□□□□□ -0.41
COMMD4-224ENST00000568877 M6PRP20645 277 aa12.51□□□□□ -0.41
COMMD4-224ENST00000568877 DCANP1Q8TF63 244 aa12.51□□□□□ -0.41
COMMD4-224ENST00000568877 MRPL32Q9BYC8 188 aaKnown RBP12.51□□□□□ -0.41
COMMD4-224ENST00000568877 NOTCH1P46531 2555 aa12.51□□□□□ -0.41
COMMD4-224ENST00000568877 K7EIL1 84 aa12.5□□□□□ -0.41
COMMD4-224ENST00000568877 MRPS12O15235 138 aaKnown RBP12.5□□□□□ -0.41
COMMD4-224ENST00000568877 MIR17HGQ75NE6 70 aa12.5□□□□□ -0.41
COMMD4-224ENST00000568877 BPIFA4PQ86YQ2 179 aa12.5□□□□□ -0.41
COMMD4-224ENST00000568877 C9orf62Q8N4C0 152 aa12.5□□□□□ -0.41
COMMD4-224ENST00000568877 FUT9Q9Y231 359 aa12.5□□□□□ -0.41
COMMD4-224ENST00000568877 MBP02144 154 aa12.49□□□□□ -0.41
COMMD4-224ENST00000568877 ATF4P18848 351 aaPredicted RBP12.49□□□□□ -0.41
COMMD4-224ENST00000568877 CMC4P56277 68 aaPredicted RBP12.49□□□□□ -0.41
COMMD4-224ENST00000568877 RAB2AP61019 212 aa12.49□□□□□ -0.41
COMMD4-224ENST00000568877 RHOBP62745 196 aa12.49□□□□□ -0.41
COMMD4-224ENST00000568877 EIF5AP63241 154 aaKnown RBP12.49□□□□□ -0.41
COMMD4-224ENST00000568877 SPATA31B1PQ5VZV4 182 aa12.49□□□□□ -0.41
COMMD4-224ENST00000568877 OR10G4Q8NGN3 311 aa12.49□□□□□ -0.41
COMMD4-224ENST00000568877 OR10G9Q8NGN4 311 aa12.49□□□□□ -0.41
COMMD4-224ENST00000568877 OR10G7Q8NGN6 311 aa12.49□□□□□ -0.41
COMMD4-224ENST00000568877 C17orf77Q96MU5 243 aa12.49□□□□□ -0.41
COMMD4-224ENST00000568877 C19orf73Q9NVV2 129 aa12.49□□□□□ -0.41
COMMD4-224ENST00000568877 OR11H12B2RN74 326 aa12.48□□□□□ -0.41
COMMD4-224ENST00000568877 SPP1P10451 314 aa12.48□□□□□ -0.41
COMMD4-224ENST00000568877 MEOX2P50222 304 aa12.48□□□□□ -0.41
COMMD4-224ENST00000568877 ODF3L2Q3SX64 289 aa12.48□□□□□ -0.41
COMMD4-224ENST00000568877 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.48□□□□□ -0.41
COMMD4-224ENST00000568877 FAM24BQ8N5W8 94 aa12.48□□□□□ -0.41
COMMD4-224ENST00000568877 FAM110AQ9BQ89 295 aa12.48□□□□□ -0.41
COMMD4-224ENST00000568877 SLC25A2Q9BXI2 301 aa12.48□□□□□ -0.41
COMMD4-224ENST00000568877 UBQLN2Q9UHD9 624 aa12.48□□□□□ -0.41
COMMD4-224ENST00000568877 A0A087X0K7 114 aa12.47□□□□□ -0.41
COMMD4-224ENST00000568877 A0A1W2PPV4 95 aa12.47□□□□□ -0.41
COMMD4-224ENST00000568877 SOCS3O14543 225 aa12.47□□□□□ -0.41
COMMD4-224ENST00000568877 TPT1P13693 172 aaKnown RBP12.47□□□□□ -0.41
COMMD4-224ENST00000568877 C4BPBP20851 252 aa12.47□□□□□ -0.41
COMMD4-224ENST00000568877 TMEM41BQ5BJD5 291 aa12.47□□□□□ -0.41
COMMD4-224ENST00000568877 SAMD13Q5VXD3 122 aa12.47□□□□□ -0.41
COMMD4-224ENST00000568877 FAM122CQ6P4D5 195 aa12.47□□□□□ -0.41
COMMD4-224ENST00000568877 BAP18Q8IXM2 172 aa12.47□□□□□ -0.41
COMMD4-224ENST00000568877 STOML3Q8TAV4 291 aa12.47□□□□□ -0.41
COMMD4-224ENST00000568877 FAM167A-AS1Q96KT0 104 aa12.47□□□□□ -0.41
COMMD4-224ENST00000568877 MAP6D1Q9H9H5 199 aa12.47□□□□□ -0.41
COMMD4-224ENST00000568877 TMEM14CQ9P0S9 112 aa12.47□□□□□ -0.41
COMMD4-224ENST00000568877 MEGF8Q7Z7M0 2845 aa12.46□□□□□ -0.41
COMMD4-224ENST00000568877 SEC11BP0C7V7 166 aa12.46□□□□□ -0.41
COMMD4-224ENST00000568877 ZNF688P0C7X2 276 aa12.46□□□□□ -0.41
COMMD4-224ENST00000568877 IGLC2P0DOY2 106 aa12.46□□□□□ -0.41
COMMD4-224ENST00000568877 NKX2-5P52952 324 aaPredicted RBP12.46□□□□□ -0.41
COMMD4-224ENST00000568877 DEFB121Q5J5C9 76 aa12.46□□□□□ -0.41
COMMD4-224ENST00000568877 RPP25LQ8N5L8 163 aaKnown RBP12.46□□□□□ -0.41
COMMD4-224ENST00000568877 DEFB125Q8N687 156 aa12.46□□□□□ -0.41
COMMD4-224ENST00000568877 MRAPQ8TCY5 172 aa12.46□□□□□ -0.41
COMMD4-224ENST00000568877 C16orf92Q96LL3 132 aa12.46□□□□□ -0.41
COMMD4-224ENST00000568877 WFDC10AQ9H1F0 79 aa12.46□□□□□ -0.41
COMMD4-224ENST00000568877 HRH4Q9H3N8 390 aa12.46□□□□□ -0.41
COMMD4-224ENST00000568877 RPRMQ9NS64 109 aa12.46□□□□□ -0.41
COMMD4-224ENST00000568877 SORL1Q92673 2214 aa12.46□□□□□ -0.42
COMMD4-224ENST00000568877 H3BQ15 152 aa12.45□□□□□ -0.42
COMMD4-224ENST00000568877 ISLRO14498 428 aa12.45□□□□□ -0.42
COMMD4-224ENST00000568877 SNRPCP09234 159 aaKnown RBP12.45□□□□□ -0.42
COMMD4-224ENST00000568877 IGHV4-30-4P0DP06 118 aa12.45□□□□□ -0.42
COMMD4-224ENST00000568877 ID1P41134 155 aa12.45□□□□□ -0.42
COMMD4-224ENST00000568877 PSMB3P49720 205 aa12.45□□□□□ -0.42
COMMD4-224ENST00000568877 TAS2R45P59539 299 aa12.45□□□□□ -0.42
COMMD4-224ENST00000568877 DEFB131AP59861 70 aa12.45□□□□□ -0.42
COMMD4-224ENST00000568877 SNRPD3P62318 126 aaKnown RBP12.45□□□□□ -0.42
COMMD4-224ENST00000568877 AKR1C8PQ5T2L2 129 aa12.45□□□□□ -0.42
COMMD4-224ENST00000568877 SLC51BQ86UW2 128 aa12.45□□□□□ -0.42
COMMD4-224ENST00000568877 OR51M1Q9H341 326 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms