RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 HIGD1AQ9Y241 93 aa21.26■□□□□ 0.99
RAB40C-211ENST00000568586 UPK1BO75841 260 aa21.25■□□□□ 0.99
RAB40C-211ENST00000568586 RAP2BP61225 183 aa21.25■□□□□ 0.99
RAB40C-211ENST00000568586 XCL2Q9UBD3 114 aa21.25■□□□□ 0.99
RAB40C-211ENST00000568586 C5orf51A6NDU8 294 aa21.24■□□□□ 0.99
RAB40C-211ENST00000568586 FAM25EA8MYX2 175 aa21.24■□□□□ 0.99
RAB40C-211ENST00000568586 PXDC1Q5TGL8 231 aa21.24■□□□□ 0.99
RAB40C-211ENST00000568586 C16orf92Q96LL3 132 aa21.24■□□□□ 0.99
RAB40C-211ENST00000568586 C20orf173Q96LM9 149 aa21.24■□□□□ 0.99
RAB40C-211ENST00000568586 DOK5Q9P104 306 aa21.24■□□□□ 0.99
RAB40C-211ENST00000568586 A0A0J9YX75 114 aa21.23■□□□□ 0.99
RAB40C-211ENST00000568586 A8MTW9 85 aa21.23■□□□□ 0.99
RAB40C-211ENST00000568586 L7N2F9 121 aa21.23■□□□□ 0.99
RAB40C-211ENST00000568586 VAMP2P63027 116 aa21.23■□□□□ 0.99
RAB40C-211ENST00000568586 GSG1LQ6UXU4 331 aa21.23■□□□□ 0.99
RAB40C-211ENST00000568586 ZNF705AQ6ZN79 300 aaPredicted RBP21.23■□□□□ 0.99
RAB40C-211ENST00000568586 ZNF709Q8N972 641 aa21.23■□□□□ 0.99
RAB40C-211ENST00000568586 RPRMQ9NS64 109 aa21.23■□□□□ 0.99
RAB40C-211ENST00000568586 RPL7P18124 248 aaKnown RBP21.22■□□□□ 0.99
RAB40C-211ENST00000568586 PATE2Q6UY27 113 aa21.22■□□□□ 0.99
RAB40C-211ENST00000568586 S100A7AQ86SG5 101 aa21.22■□□□□ 0.99
RAB40C-211ENST00000568586 NEU1Q99519 415 aa21.22■□□□□ 0.99
RAB40C-211ENST00000568586 LSM5Q9Y4Y9 91 aaKnown RBP21.22■□□□□ 0.99
RAB40C-211ENST00000568586 ELOA3CA0A087WX78 387 aaPredicted RBP21.21■□□□□ 0.99
RAB40C-211ENST00000568586 IFITM3Q01628 133 aa21.21■□□□□ 0.99
RAB40C-211ENST00000568586 SLC38A11Q08AI6 406 aa21.21■□□□□ 0.99
RAB40C-211ENST00000568586 EBLN2Q6P2I7 272 aa21.21■□□□□ 0.99
RAB40C-211ENST00000568586 ZNF546Q86UE3 836 aa21.21■□□□□ 0.99
RAB40C-211ENST00000568586 TRAV8-2A0A0B4J237 113 aa21.2■□□□□ 0.98
RAB40C-211ENST00000568586 ZNF705FA8MVS1 300 aaPredicted RBP21.2■□□□□ 0.98
RAB40C-211ENST00000568586 AGPAT2O15120 278 aa21.2■□□□□ 0.98
RAB40C-211ENST00000568586 OR5G3P0C626 314 aa21.2■□□□□ 0.98
RAB40C-211ENST00000568586 ZNF705DP0CH99 300 aaPredicted RBP21.2■□□□□ 0.98
RAB40C-211ENST00000568586 ZNF705BP0CI00 300 aaPredicted RBP21.2■□□□□ 0.98
RAB40C-211ENST00000568586 ARL6Q9H0F7 186 aa21.2■□□□□ 0.98
RAB40C-211ENST00000568586 RNF24Q9Y225 148 aa21.2■□□□□ 0.98
RAB40C-211ENST00000568586 F6UB75 175 aa21.19■□□□□ 0.98
RAB40C-211ENST00000568586 PSG9Q00887 426 aa21.19■□□□□ 0.98
RAB40C-211ENST00000568586 FAM78BQ5VT40 261 aa21.19■□□□□ 0.98
RAB40C-211ENST00000568586 UHRF2Q96PU4 802 aa21.19■□□□□ 0.98
RAB40C-211ENST00000568586 MGST2Q99735 147 aa21.19■□□□□ 0.98
RAB40C-211ENST00000568586 A0A087X0K7 114 aa21.18■□□□□ 0.98
RAB40C-211ENST00000568586 GOSR2O14653 212 aa21.18■□□□□ 0.98
RAB40C-211ENST00000568586 IGKV3-20P01619 116 aa21.18■□□□□ 0.98
RAB40C-211ENST00000568586 PVALBP20472 110 aaPredicted RBP21.18■□□□□ 0.98
RAB40C-211ENST00000568586 VWC2Q2TAL6 325 aa21.18■□□□□ 0.98
RAB40C-211ENST00000568586 OR4B1Q8NGF8 309 aa21.18■□□□□ 0.98
RAB40C-211ENST00000568586 ARV1Q9H2C2 271 aa21.18■□□□□ 0.98
RAB40C-211ENST00000568586 LYRM2Q9NU23 88 aaPredicted RBP21.18■□□□□ 0.98
RAB40C-211ENST00000568586 KMT2AQ03164 3969 aa21.18■□□□□ 0.98
RAB40C-211ENST00000568586 FAM24AA6NFZ4 105 aa21.17■□□□□ 0.98
RAB40C-211ENST00000568586 C11orf94C9JXX5 98 aa21.17■□□□□ 0.98
RAB40C-211ENST00000568586 MRPS12O15235 138 aaKnown RBP21.17■□□□□ 0.98
RAB40C-211ENST00000568586 CAV2P51636 162 aa21.17■□□□□ 0.98
RAB40C-211ENST00000568586 ENKURQ8TC29 256 aa21.17■□□□□ 0.98
RAB40C-211ENST00000568586 EPPK1P58107 5090 aaKnown RBP21.16■□□□□ 0.98
RAB40C-211ENST00000568586 SMIM9A6NGZ8 99 aa21.16■□□□□ 0.98
RAB40C-211ENST00000568586 BCAP31P51572 246 aa21.16■□□□□ 0.98
RAB40C-211ENST00000568586 TCTAP57738 103 aa21.16■□□□□ 0.98
RAB40C-211ENST00000568586 RAB32Q13637 225 aa21.16■□□□□ 0.98
RAB40C-211ENST00000568586 AMTNQ6UX39 209 aa21.16■□□□□ 0.98
RAB40C-211ENST00000568586 CST7O76096 145 aa21.15■□□□□ 0.98
RAB40C-211ENST00000568586 HLA-DMBP28068 263 aa21.15■□□□□ 0.98
RAB40C-211ENST00000568586 C2CD4CQ8TF44 421 aa21.15■□□□□ 0.98
RAB40C-211ENST00000568586 SLC35B3Q9H1N7 401 aa21.15■□□□□ 0.98
RAB40C-211ENST00000568586 GPN1Q9HCN4 374 aaPredicted RBP21.15■□□□□ 0.98
RAB40C-211ENST00000568586 VPS13DQ5THJ4 4388 aa21.15■□□□□ 0.98
RAB40C-211ENST00000568586 LY6G6CO95867 125 aa21.14■□□□□ 0.97
RAB40C-211ENST00000568586 SULT1A1P50225 295 aa21.14■□□□□ 0.97
RAB40C-211ENST00000568586 FXYD7P58549 80 aa21.14■□□□□ 0.97
RAB40C-211ENST00000568586 TMEM252Q8N6L7 170 aa21.14■□□□□ 0.97
RAB40C-211ENST00000568586 TMEM37Q8WXS4 190 aa21.14■□□□□ 0.97
RAB40C-211ENST00000568586 WDR83OSQ9Y284 106 aa21.14■□□□□ 0.97
RAB40C-211ENST00000568586 S100A11P31949 105 aa21.13■□□□□ 0.97
RAB40C-211ENST00000568586 LGALS9CQ6DKI2 356 aa21.13■□□□□ 0.97
RAB40C-211ENST00000568586 NRARPQ7Z6K4 114 aa21.13■□□□□ 0.97
RAB40C-211ENST00000568586 CHAC2Q8WUX2 184 aa21.13■□□□□ 0.97
RAB40C-211ENST00000568586 UQCC1Q9NVA1 299 aa21.13■□□□□ 0.97
RAB40C-211ENST00000568586 PRAF2O60831 178 aa21.12■□□□□ 0.97
RAB40C-211ENST00000568586 CAMLGP49069 296 aa21.12■□□□□ 0.97
RAB40C-211ENST00000568586 S100A10P60903 97 aa21.12■□□□□ 0.97
RAB40C-211ENST00000568586 PRR20EP86478 221 aa21.12■□□□□ 0.97
RAB40C-211ENST00000568586 PRR20CP86479 221 aa21.12■□□□□ 0.97
RAB40C-211ENST00000568586 PRR20DP86480 221 aa21.12■□□□□ 0.97
RAB40C-211ENST00000568586 PRR20BP86481 221 aa21.12■□□□□ 0.97
RAB40C-211ENST00000568586 PRR20AP86496 221 aa21.12■□□□□ 0.97
RAB40C-211ENST00000568586 RAB31Q13636 194 aa21.12■□□□□ 0.97
RAB40C-211ENST00000568586 IGFL4Q6B9Z1 124 aa21.12■□□□□ 0.97
RAB40C-211ENST00000568586 LINC00305Q7Z4B0 112 aa21.12■□□□□ 0.97
RAB40C-211ENST00000568586 IGSF23A1L1A6 192 aa21.11■□□□□ 0.97
RAB40C-211ENST00000568586 DUSP14O95147 198 aaKnown RBP21.11■□□□□ 0.97
RAB40C-211ENST00000568586 CXCL3P19876 107 aa21.11■□□□□ 0.97
RAB40C-211ENST00000568586 C1orf158Q8N1D5 194 aa21.11■□□□□ 0.97
RAB40C-211ENST00000568586 RNF182Q8N6D2 247 aa21.11■□□□□ 0.97
RAB40C-211ENST00000568586 MARVELD1Q9BSK0 173 aa21.11■□□□□ 0.97
RAB40C-211ENST00000568586 BATF3Q9NR55 127 aa21.11■□□□□ 0.97
RAB40C-211ENST00000568586 CELA1Q9UNI1 258 aa21.11■□□□□ 0.97
RAB40C-211ENST00000568586 TMEM189A5PLL7 270 aa21.1■□□□□ 0.97
RAB40C-211ENST00000568586 CXCL2P19875 107 aa21.1■□□□□ 0.97
RAB40C-211ENST00000568586 CNN1P51911 297 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms