RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 FAM78BQ5VT40 261 aa11.82□□□□□ -0.52
SPG7-218ENST00000568205 MORN5Q5VZ52 161 aa11.82□□□□□ -0.52
SPG7-218ENST00000568205 SPATA31B1PQ5VZV4 182 aa11.82□□□□□ -0.52
SPG7-218ENST00000568205 SIGLEC15Q6ZMC9 328 aa11.82□□□□□ -0.52
SPG7-218ENST00000568205 BAP18Q8IXM2 172 aa11.82□□□□□ -0.52
SPG7-218ENST00000568205 ZMAT5Q9UDW3 170 aaKnown RBP11.82□□□□□ -0.52
SPG7-218ENST00000568205 ZNF785A8K8V0 405 aa11.81□□□□□ -0.52
SPG7-218ENST00000568205 MBP02144 154 aa11.81□□□□□ -0.52
SPG7-218ENST00000568205 SPP1P10451 314 aa11.81□□□□□ -0.52
SPG7-218ENST00000568205 RPL11P62913 178 aaKnown RBP11.81□□□□□ -0.52
SPG7-218ENST00000568205 GUCA2BQ16661 112 aa11.81□□□□□ -0.52
SPG7-218ENST00000568205 KPRPQ5T749 579 aaPredicted RBP11.81□□□□□ -0.52
SPG7-218ENST00000568205 SLC51BQ86UW2 128 aa11.81□□□□□ -0.52
SPG7-218ENST00000568205 GPR82Q96P67 336 aa11.81□□□□□ -0.52
SPG7-218ENST00000568205 SPAG8Q99932 426 aaPredicted RBP11.81□□□□□ -0.52
SPG7-218ENST00000568205 MRPL32Q9BYC8 188 aaKnown RBP11.81□□□□□ -0.52
SPG7-218ENST00000568205 SEPSECSQ9HD40 501 aaKnown RBP11.81□□□□□ -0.52
SPG7-218ENST00000568205 FUT9Q9Y231 359 aa11.81□□□□□ -0.52
SPG7-218ENST00000568205 IGKV3-7A0A075B6H7 116 aa11.8□□□□□ -0.52
SPG7-218ENST00000568205 TRAV5A0A0B4J249 113 aa11.8□□□□□ -0.52
SPG7-218ENST00000568205 RPL7P18124 248 aaKnown RBP11.8□□□□□ -0.52
SPG7-218ENST00000568205 GALR1P47211 349 aa11.8□□□□□ -0.52
SPG7-218ENST00000568205 KRTAP10-11P60412 298 aa11.8□□□□□ -0.52
SPG7-218ENST00000568205 RHOBP62745 196 aa11.8□□□□□ -0.52
SPG7-218ENST00000568205 BEAN1Q3B7T3 259 aa11.8□□□□□ -0.52
SPG7-218ENST00000568205 MIR17HGQ75NE6 70 aa11.8□□□□□ -0.52
SPG7-218ENST00000568205 OR10G4Q8NGN3 311 aa11.8□□□□□ -0.52
SPG7-218ENST00000568205 OR10G9Q8NGN4 311 aa11.8□□□□□ -0.52
SPG7-218ENST00000568205 OR10G7Q8NGN6 311 aa11.8□□□□□ -0.52
SPG7-218ENST00000568205 ZNF256Q9Y2P7 627 aaPredicted RBP11.8□□□□□ -0.52
SPG7-218ENST00000568205 SEC11BP0C7V7 166 aa11.79□□□□□ -0.52
SPG7-218ENST00000568205 GP9P14770 177 aa11.79□□□□□ -0.52
SPG7-218ENST00000568205 TMEM41BQ5BJD5 291 aa11.79□□□□□ -0.52
SPG7-218ENST00000568205 AKR1C8PQ5T2L2 129 aa11.79□□□□□ -0.52
SPG7-218ENST00000568205 FAM122CQ6P4D5 195 aa11.79□□□□□ -0.52
SPG7-218ENST00000568205 BPIFA4PQ86YQ2 179 aa11.79□□□□□ -0.52
SPG7-218ENST00000568205 GBGT1Q8N5D6 347 aa11.79□□□□□ -0.52
SPG7-218ENST00000568205 STXBP6Q8NFX7 210 aa11.79□□□□□ -0.52
SPG7-218ENST00000568205 MS4A6AQ9H2W1 248 aa11.79□□□□□ -0.52
SPG7-218ENST00000568205 RPRMQ9NS64 109 aa11.79□□□□□ -0.52
SPG7-218ENST00000568205 BOLA1Q9Y3E2 137 aa11.79□□□□□ -0.52
SPG7-218ENST00000568205 TRAV2A0A0B4J234 112 aa11.78□□□□□ -0.52
SPG7-218ENST00000568205 OR4C46A6NHA9 309 aa11.78□□□□□ -0.52
SPG7-218ENST00000568205 MRPS12O15235 138 aaKnown RBP11.78□□□□□ -0.52
SPG7-218ENST00000568205 TFPI2P48307 235 aa11.78□□□□□ -0.52
SPG7-218ENST00000568205 PAFAH1B2P68402 229 aa11.78□□□□□ -0.52
SPG7-218ENST00000568205 RPP25LQ8N5L8 163 aaKnown RBP11.78□□□□□ -0.52
SPG7-218ENST00000568205 TMED6Q8WW62 240 aa11.78□□□□□ -0.52
SPG7-218ENST00000568205 FAM167A-AS1Q96KT0 104 aa11.78□□□□□ -0.52
SPG7-218ENST00000568205 NRN1Q9NPD7 142 aa11.78□□□□□ -0.52
SPG7-218ENST00000568205 SMAD5-AS1Q9Y6J3 95 aa11.78□□□□□ -0.52
SPG7-218ENST00000568205 A0A1W2PPV4 95 aa11.77□□□□□ -0.53
SPG7-218ENST00000568205 DNASE2O00115 360 aaPredicted RBP11.77□□□□□ -0.53
SPG7-218ENST00000568205 ATF4P18848 351 aaPredicted RBP11.77□□□□□ -0.53
SPG7-218ENST00000568205 CDC34P49427 236 aaPredicted RBP11.77□□□□□ -0.53
SPG7-218ENST00000568205 EIF5AL1Q6IS14 154 aaKnown RBP11.77□□□□□ -0.53
SPG7-218ENST00000568205 WFDC3Q8IUB2 231 aa11.77□□□□□ -0.53
SPG7-218ENST00000568205 SLC25A2Q9BXI2 301 aa11.77□□□□□ -0.53
SPG7-218ENST00000568205 TMEM14CQ9P0S9 112 aa11.77□□□□□ -0.53
SPG7-218ENST00000568205 UMAD1C9J7I0 102 aa11.76□□□□□ -0.53
SPG7-218ENST00000568205 EIF3GO75821 320 aaKnown RBP eCLIP11.76□□□□□ -0.53
SPG7-218ENST00000568205 TAS2R45P59539 299 aa11.76□□□□□ -0.53
SPG7-218ENST00000568205 DCANP1Q8TF63 244 aa11.76□□□□□ -0.53
SPG7-218ENST00000568205 C17orf77Q96MU5 243 aa11.76□□□□□ -0.53
SPG7-218ENST00000568205 PRR25Q96S07 402 aa11.76□□□□□ -0.53
SPG7-218ENST00000568205 ACTR3CQ9C0K3 210 aaPredicted RBP11.76□□□□□ -0.53
SPG7-218ENST00000568205 PLA2G2EQ9NZK7 142 aa11.76□□□□□ -0.53
SPG7-218ENST00000568205 A0A087X0K7 114 aa11.75□□□□□ -0.53
SPG7-218ENST00000568205 K7EQG2 157 aa11.75□□□□□ -0.53
SPG7-218ENST00000568205 IGLC2P0DOY2 106 aa11.75□□□□□ -0.53
SPG7-218ENST00000568205 MEOX2P50222 304 aa11.75□□□□□ -0.53
SPG7-218ENST00000568205 KHDC3LQ587J8 217 aa11.75□□□□□ -0.53
SPG7-218ENST00000568205 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.75□□□□□ -0.53
SPG7-218ENST00000568205 RAB24Q969Q5 203 aa11.75□□□□□ -0.53
SPG7-218ENST00000568205 DNAH3Q8TD57 4116 aa11.74□□□□□ -0.53
SPG7-218ENST00000568205 H3BQ15 152 aa11.74□□□□□ -0.53
SPG7-218ENST00000568205 OR7C2O60412 319 aa11.74□□□□□ -0.53
SPG7-218ENST00000568205 PYYP10082 97 aa11.74□□□□□ -0.53
SPG7-218ENST00000568205 CD81P60033 236 aa11.74□□□□□ -0.53
SPG7-218ENST00000568205 SAMD13Q5VXD3 122 aa11.74□□□□□ -0.53
SPG7-218ENST00000568205 GTSCR1Q86UQ5 136 aa11.74□□□□□ -0.53
SPG7-218ENST00000568205 PAXXQ9BUH6 204 aa11.74□□□□□ -0.53
SPG7-218ENST00000568205 OR51M1Q9H341 326 aa11.74□□□□□ -0.53
SPG7-218ENST00000568205 CTXND1A0A1B0GTU2 59 aa11.73□□□□□ -0.53
SPG7-218ENST00000568205 SOCS3O14543 225 aa11.73□□□□□ -0.53
SPG7-218ENST00000568205 HMGB3O15347 200 aaKnown RBP11.73□□□□□ -0.53
SPG7-218ENST00000568205 SNRPCP09234 159 aaKnown RBP11.73□□□□□ -0.53
SPG7-218ENST00000568205 CD7P09564 240 aa11.73□□□□□ -0.53
SPG7-218ENST00000568205 STAG3L2P0CL84 134 aa11.73□□□□□ -0.53
SPG7-218ENST00000568205 STAG3L3P0CL85 134 aa11.73□□□□□ -0.53
SPG7-218ENST00000568205 HIST1H1EP10412 219 aaKnown RBP11.73□□□□□ -0.53
SPG7-218ENST00000568205 ZNF726P1Q15940 193 aa11.73□□□□□ -0.53
SPG7-218ENST00000568205 LCN15Q6UWW0 184 aa11.73□□□□□ -0.53
SPG7-218ENST00000568205 SSX7Q7RTT5 188 aa11.73□□□□□ -0.53
SPG7-218ENST00000568205 FAM24BQ8N5W8 94 aa11.73□□□□□ -0.53
SPG7-218ENST00000568205 SORL1Q92673 2214 aa11.73□□□□□ -0.53
SPG7-218ENST00000568205 ZNF503Q96F45 646 aa11.73□□□□□ -0.53
SPG7-218ENST00000568205 HRH4Q9H3N8 390 aa11.73□□□□□ -0.53
SPG7-218ENST00000568205 H3BTX0 84 aa11.72□□□□□ -0.53
SPG7-218ENST00000568205 PRB2P02812 416 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms