RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 LGALSLQ3ZCW2 172 aaPredicted RBP7.22□□□□□ -1.25
CLK3-220ENST00000567992 TEX261Q6UWH6 196 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 ZNF546Q86UE3 836 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 OR2T35Q8NGX2 323 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 UHRF2Q96PU4 802 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 SHANK2-AS3Q9BTD1 123 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 TMEM147Q9BVK8 224 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 SLC25A39Q9BZJ4 359 aaPredicted RBP7.22□□□□□ -1.25
CLK3-220ENST00000567992 EDA2RQ9HAV5 297 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 SEPSECSQ9HD40 501 aaKnown RBP7.22□□□□□ -1.25
CLK3-220ENST00000567992 FBXL17Q9UF56 701 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 AGRNO00468 2067 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 LYSTQ99698 3801 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 LINC00862A6NCI5 91 aa7.21□□□□□ -1.26
CLK3-220ENST00000567992 HYPMO75409 117 aa7.21□□□□□ -1.26
CLK3-220ENST00000567992 RPL35AP18077 110 aaKnown RBP7.21□□□□□ -1.26
CLK3-220ENST00000567992 CAMLGP49069 296 aa7.21□□□□□ -1.26
CLK3-220ENST00000567992 HBG1P69891 147 aa7.21□□□□□ -1.26
CLK3-220ENST00000567992 HBG2P69892 147 aa7.21□□□□□ -1.26
CLK3-220ENST00000567992 BAXQ07812 192 aa7.21□□□□□ -1.26
CLK3-220ENST00000567992 OPCMLQ14982 345 aa7.21□□□□□ -1.26
CLK3-220ENST00000567992 OR8I2Q8N0Y5 310 aa7.21□□□□□ -1.26
CLK3-220ENST00000567992 ZNF680Q8NEM1 530 aa7.21□□□□□ -1.26
CLK3-220ENST00000567992 OR5C1Q8NGR4 320 aa7.21□□□□□ -1.26
CLK3-220ENST00000567992 TMEM37Q8WXS4 190 aa7.21□□□□□ -1.26
CLK3-220ENST00000567992 WWC2-AS2Q96NR7 200 aa7.21□□□□□ -1.26
CLK3-220ENST00000567992 ARL6Q9H0F7 186 aa7.21□□□□□ -1.26
CLK3-220ENST00000567992 MBD2Q9UBB5 411 aa7.21□□□□□ -1.26
CLK3-220ENST00000567992 PFDN2Q9UHV9 154 aa7.21□□□□□ -1.26
CLK3-220ENST00000567992 HIGD1AQ9Y241 93 aa7.21□□□□□ -1.26
CLK3-220ENST00000567992 PLECQ15149 4684 aaKnown RBP7.21□□□□□ -1.26
CLK3-220ENST00000567992 KIR2DL5BA0A0G2JN68 375 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 KIR2DL5BA0A0G2JPC4 375 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 KNCNA6PVL3 124 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 HMSDA8MTL9 139 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 MRPS12O15235 138 aaKnown RBP7.2□□□□□ -1.26
CLK3-220ENST00000567992 IFNA7P01567 189 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 RLN2P04090 185 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 APOC4P55056 127 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 ATP6V1FQ16864 119 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 PSMG4Q5JS54 123 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 PXDC1Q5TGL8 231 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 MORN5Q5VZ52 161 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 MIC13Q5XKP0 118 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 TRPT1Q86TN4 253 aaKnown RBP7.2□□□□□ -1.26
CLK3-220ENST00000567992 KIR2DL5AQ8N109 375 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 KIR2DL5BQ8NHK3 375 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 OVOL2Q9BRP0 275 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 NPCDR1Q9BY65 106 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 SLC25A31Q9H0C2 315 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 ARV1Q9H2C2 271 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 SLC25A22Q9H936 323 aa7.2□□□□□ -1.26
CLK3-220ENST00000567992 TRAV8-2A0A0B4J237 113 aa7.19□□□□□ -1.26
CLK3-220ENST00000567992 GIG44P09565 113 aaPredicted RBP7.19□□□□□ -1.26
CLK3-220ENST00000567992 OR5G3P0C626 314 aa7.19□□□□□ -1.26
CLK3-220ENST00000567992 PET100P0DJ07 73 aa7.19□□□□□ -1.26
CLK3-220ENST00000567992 FGF7P21781 194 aa7.19□□□□□ -1.26
CLK3-220ENST00000567992 RPL29P47914 159 aaKnown RBP7.19□□□□□ -1.26
CLK3-220ENST00000567992 PSMB3P49720 205 aa7.19□□□□□ -1.26
CLK3-220ENST00000567992 DEFB1P60022 68 aa7.19□□□□□ -1.26
CLK3-220ENST00000567992 CLINT1Q14677 625 aa7.19□□□□□ -1.26
CLK3-220ENST00000567992 DEFB135Q30KP9 77 aa7.19□□□□□ -1.26
CLK3-220ENST00000567992 CLLU1Q5K131 121 aa7.19□□□□□ -1.26
CLK3-220ENST00000567992 Q6ZWC4 215 aa7.19□□□□□ -1.26
CLK3-220ENST00000567992 THAP6Q8TBB0 222 aa7.19□□□□□ -1.26
CLK3-220ENST00000567992 C20orf173Q96LM9 149 aa7.19□□□□□ -1.26
CLK3-220ENST00000567992 SLC39A9Q9NUM3 307 aa7.19□□□□□ -1.26
CLK3-220ENST00000567992 A0A087X0K7 114 aa7.18□□□□□ -1.26
CLK3-220ENST00000567992 UBE2CO00762 179 aa7.18□□□□□ -1.26
CLK3-220ENST00000567992 ISLRO14498 428 aa7.18□□□□□ -1.26
CLK3-220ENST00000567992 COX7A2P2O60397 106 aa7.18□□□□□ -1.26
CLK3-220ENST00000567992 MPDU1O75352 247 aa7.18□□□□□ -1.26
CLK3-220ENST00000567992 RPL12P30050 165 aaKnown RBP7.18□□□□□ -1.26
CLK3-220ENST00000567992 GALR1P47211 349 aa7.18□□□□□ -1.26
CLK3-220ENST00000567992 B2MP61769 119 aa7.18□□□□□ -1.26
CLK3-220ENST00000567992 SNRPD3P62318 126 aaKnown RBP7.18□□□□□ -1.26
CLK3-220ENST00000567992 RAB31Q13636 194 aa7.18□□□□□ -1.26
CLK3-220ENST00000567992 ACTL10Q5JWF8 245 aa7.18□□□□□ -1.26
CLK3-220ENST00000567992 GDF5OSQ5U4N7 250 aa7.18□□□□□ -1.26
CLK3-220ENST00000567992 LINC00305Q7Z4B0 112 aa7.18□□□□□ -1.26
CLK3-220ENST00000567992 GPR82Q96P67 336 aa7.18□□□□□ -1.26
CLK3-220ENST00000567992 RSG1Q9BU20 258 aa7.18□□□□□ -1.26
CLK3-220ENST00000567992 WDR61Q9GZS3 305 aaKnown RBP7.18□□□□□ -1.26
CLK3-220ENST00000567992 CSTL1Q9H114 145 aa7.18□□□□□ -1.26
CLK3-220ENST00000567992 TP53TG1Q9Y2A0 90 aa7.18□□□□□ -1.26
CLK3-220ENST00000567992 PXMP4Q9Y6I8 212 aa7.18□□□□□ -1.26
CLK3-220ENST00000567992 RYR3Q15413 4870 aa7.18□□□□□ -1.26
CLK3-220ENST00000567992 SACSQ9NZJ4 4579 aa7.17□□□□□ -1.26
CLK3-220ENST00000567992 TENM2Q9NT68 2774 aa7.17□□□□□ -1.26
CLK3-220ENST00000567992 ELOA3CA0A087WX78 387 aaPredicted RBP7.17□□□□□ -1.26
CLK3-220ENST00000567992 HLA-DRB4P13762 266 aa7.17□□□□□ -1.26
CLK3-220ENST00000567992 RPL7P18124 248 aaKnown RBP7.17□□□□□ -1.26
CLK3-220ENST00000567992 CXCL2P19875 107 aa7.17□□□□□ -1.26
CLK3-220ENST00000567992 S100A7P31151 101 aa7.17□□□□□ -1.26
CLK3-220ENST00000567992 MEOX2P50222 304 aa7.17□□□□□ -1.26
CLK3-220ENST00000567992 GCSAMLQ5JQS6 135 aa7.17□□□□□ -1.26
CLK3-220ENST00000567992 C10orf113Q5VZT2 155 aa7.17□□□□□ -1.26
CLK3-220ENST00000567992 STHQ8IWL8 128 aa7.17□□□□□ -1.26
CLK3-220ENST00000567992 RNF183Q96D59 192 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms