RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 RARRES2Q99969 163 aa18.36■□□□□ 0.53
FANCA-228ENST00000567943 RLN2P04090 185 aa18.35■□□□□ 0.53
FANCA-228ENST00000567943 C4BPBP20851 252 aa18.35■□□□□ 0.53
FANCA-228ENST00000567943 MEOX2P50222 304 aa18.35■□□□□ 0.53
FANCA-228ENST00000567943 DEFB1P60022 68 aa18.35■□□□□ 0.53
FANCA-228ENST00000567943 PATE2Q6UY27 113 aa18.35■□□□□ 0.53
FANCA-228ENST00000567943 ISLRO14498 428 aa18.34■□□□□ 0.53
FANCA-228ENST00000567943 ATF4P18848 351 aaPredicted RBP18.34■□□□□ 0.53
FANCA-228ENST00000567943 S100A11P31949 105 aa18.34■□□□□ 0.53
FANCA-228ENST00000567943 CAMLGP49069 296 aa18.34■□□□□ 0.53
FANCA-228ENST00000567943 H2BFSP57053 126 aa18.34■□□□□ 0.53
FANCA-228ENST00000567943 HBG1P69891 147 aa18.34■□□□□ 0.53
FANCA-228ENST00000567943 HBG2P69892 147 aa18.34■□□□□ 0.53
FANCA-228ENST00000567943 CYCSP99999 105 aaKnown RBP18.34■□□□□ 0.53
FANCA-228ENST00000567943 SAMD13Q5VXD3 122 aa18.34■□□□□ 0.53
FANCA-228ENST00000567943 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.34■□□□□ 0.53
FANCA-228ENST00000567943 OR11H2Q8NH07 326 aa18.34■□□□□ 0.53
FANCA-228ENST00000567943 C16orf92Q96LL3 132 aa18.34■□□□□ 0.53
FANCA-228ENST00000567943 C17orf77Q96MU5 243 aa18.34■□□□□ 0.53
FANCA-228ENST00000567943 ARV1Q9H2C2 271 aa18.34■□□□□ 0.53
FANCA-228ENST00000567943 H3BMM0 161 aa18.33■□□□□ 0.52
FANCA-228ENST00000567943 RAB31Q13636 194 aa18.33■□□□□ 0.52
FANCA-228ENST00000567943 PMS2P11Q13670 270 aa18.33■□□□□ 0.52
FANCA-228ENST00000567943 VWC2Q2TAL6 325 aa18.33■□□□□ 0.52
FANCA-228ENST00000567943 PXDC1Q5TGL8 231 aa18.33■□□□□ 0.52
FANCA-228ENST00000567943 GDF5OSQ5U4N7 250 aa18.33■□□□□ 0.52
FANCA-228ENST00000567943 S100A7AQ86SG5 101 aa18.33■□□□□ 0.52
FANCA-228ENST00000567943 OR5AC2Q9NZP5 309 aa18.33■□□□□ 0.52
FANCA-228ENST00000567943 WDR83OSQ9Y284 106 aa18.33■□□□□ 0.52
FANCA-228ENST00000567943 UBE2L5PA0A1B0GUS4 154 aa18.32■□□□□ 0.52
FANCA-228ENST00000567943 E5RGE8 158 aa18.32■□□□□ 0.52
FANCA-228ENST00000567943 HLA-DRB4P13762 266 aa18.32■□□□□ 0.52
FANCA-228ENST00000567943 RPL7P18124 248 aaKnown RBP18.32■□□□□ 0.52
FANCA-228ENST00000567943 TMEM41BQ5BJD5 291 aa18.32■□□□□ 0.52
FANCA-228ENST00000567943 HLA-DRB4X5D2U9 266 aa18.32■□□□□ 0.52
FANCA-228ENST00000567943 H0YIZ8 118 aa18.31■□□□□ 0.52
FANCA-228ENST00000567943 BAXQ07812 192 aa18.31■□□□□ 0.52
FANCA-228ENST00000567943 FGL1Q08830 312 aa18.31■□□□□ 0.52
FANCA-228ENST00000567943 SAV1Q9H4B6 383 aaPredicted RBP18.31■□□□□ 0.52
FANCA-228ENST00000567943 COX7A2P2O60397 106 aa18.3■□□□□ 0.52
FANCA-228ENST00000567943 NHLH2Q02577 135 aa18.3■□□□□ 0.52
FANCA-228ENST00000567943 ATP6V1FQ16864 119 aa18.3■□□□□ 0.52
FANCA-228ENST00000567943 MIC13Q5XKP0 118 aa18.3■□□□□ 0.52
FANCA-228ENST00000567943 FOXI2Q6ZQN5 318 aa18.3■□□□□ 0.52
FANCA-228ENST00000567943 LINC00305Q7Z4B0 112 aa18.3■□□□□ 0.52
FANCA-228ENST00000567943 PPP1R1CQ8WVI7 109 aa18.3■□□□□ 0.52
FANCA-228ENST00000567943 C20orf173Q96LM9 149 aa18.3■□□□□ 0.52
FANCA-228ENST00000567943 CLEC5AQ9NY25 188 aa18.3■□□□□ 0.52
FANCA-228ENST00000567943 CXorf65A6NEN9 183 aa18.29■□□□□ 0.52
FANCA-228ENST00000567943 PTTG1O95997 202 aa18.29■□□□□ 0.52
FANCA-228ENST00000567943 IGKV3-20P01619 116 aa18.29■□□□□ 0.52
FANCA-228ENST00000567943 NUTF2P61970 127 aaKnown RBP18.29■□□□□ 0.52
FANCA-228ENST00000567943 SLC25A31Q9H0C2 315 aa18.29■□□□□ 0.52
FANCA-228ENST00000567943 F6UB75 175 aa18.28■□□□□ 0.52
FANCA-228ENST00000567943 Q6ZRG5 221 aa18.28■□□□□ 0.52
FANCA-228ENST00000567943 CSNK1G2-AS1Q8NCQ2 148 aa18.28■□□□□ 0.52
FANCA-228ENST00000567943 TMEM37Q8WXS4 190 aa18.28■□□□□ 0.52
FANCA-228ENST00000567943 C11orf68Q9H3H3 251 aaKnown RBP18.28■□□□□ 0.52
FANCA-228ENST00000567943 RPRMQ9NS64 109 aa18.28■□□□□ 0.52
FANCA-228ENST00000567943 RNF24Q9Y225 148 aa18.28■□□□□ 0.52
FANCA-228ENST00000567943 ALG5Q9Y673 324 aa18.28■□□□□ 0.52
FANCA-228ENST00000567943 KMT2AQ03164 3969 aa18.27■□□□□ 0.52
FANCA-228ENST00000567943 DEFB4AO15263 64 aa18.27■□□□□ 0.52
FANCA-228ENST00000567943 FGF7P21781 194 aa18.27■□□□□ 0.52
FANCA-228ENST00000567943 PRR20EP86478 221 aa18.27■□□□□ 0.52
FANCA-228ENST00000567943 PRR20CP86479 221 aa18.27■□□□□ 0.52
FANCA-228ENST00000567943 PRR20DP86480 221 aa18.27■□□□□ 0.52
FANCA-228ENST00000567943 PRR20BP86481 221 aa18.27■□□□□ 0.52
FANCA-228ENST00000567943 PRR20AP86496 221 aa18.27■□□□□ 0.52
FANCA-228ENST00000567943 C10orf113Q5VZT2 155 aa18.27■□□□□ 0.52
FANCA-228ENST00000567943 IGFL4Q6B9Z1 124 aa18.27■□□□□ 0.52
FANCA-228ENST00000567943 EBLN2Q6P2I7 272 aa18.27■□□□□ 0.52
FANCA-228ENST00000567943 OR5C1Q8NGR4 320 aa18.27■□□□□ 0.52
FANCA-228ENST00000567943 XCL2Q9UBD3 114 aa18.27■□□□□ 0.52
FANCA-228ENST00000567943 ELOA3CA0A087WX78 387 aaPredicted RBP18.26■□□□□ 0.51
FANCA-228ENST00000567943 TRAV8-2A0A0B4J237 113 aa18.26■□□□□ 0.51
FANCA-228ENST00000567943 OPCMLQ14982 345 aa18.26■□□□□ 0.51
FANCA-228ENST00000567943 OR4B1Q8NGF8 309 aa18.26■□□□□ 0.51
FANCA-228ENST00000567943 EPPK1P58107 5090 aaKnown RBP18.26■□□□□ 0.51
FANCA-228ENST00000567943 MRPS12O15235 138 aaKnown RBP18.25■□□□□ 0.51
FANCA-228ENST00000567943 MPC2O95563 127 aa18.25■□□□□ 0.51
FANCA-228ENST00000567943 RPL29P47914 159 aaKnown RBP18.25■□□□□ 0.51
FANCA-228ENST00000567943 SPATA31B1PQ5VZV4 182 aa18.25■□□□□ 0.51
FANCA-228ENST00000567943 CEMP1Q6PRD7 247 aaPredicted RBP18.25■□□□□ 0.51
FANCA-228ENST00000567943 RNF182Q8N6D2 247 aa18.25■□□□□ 0.51
FANCA-228ENST00000567943 Q8NAQ8 132 aa18.25■□□□□ 0.51
FANCA-228ENST00000567943 RNF126Q9BV68 326 aa18.25■□□□□ 0.51
FANCA-228ENST00000567943 C1QTNF4Q9BXJ3 329 aa18.25■□□□□ 0.51
FANCA-228ENST00000567943 DNAJC4Q9NNZ3 241 aa18.25■□□□□ 0.51
FANCA-228ENST00000567943 A0A087X0K7 114 aa18.24■□□□□ 0.51
FANCA-228ENST00000567943 A0A0J9YX75 114 aa18.24■□□□□ 0.51
FANCA-228ENST00000567943 JTBO76095 146 aa18.24■□□□□ 0.51
FANCA-228ENST00000567943 FXYD7P58549 80 aa18.24■□□□□ 0.51
FANCA-228ENST00000567943 B2MP61769 119 aa18.24■□□□□ 0.51
FANCA-228ENST00000567943 CLINT1Q14677 625 aa18.24■□□□□ 0.51
FANCA-228ENST00000567943 FAM78BQ5VT40 261 aa18.24■□□□□ 0.51
FANCA-228ENST00000567943 MORN5Q5VZ52 161 aa18.24■□□□□ 0.51
FANCA-228ENST00000567943 OR1L4Q8NGR5 311 aa18.24■□□□□ 0.51
FANCA-228ENST00000567943 SLC39A9Q9NUM3 307 aa18.24■□□□□ 0.51
FANCA-228ENST00000567943 X6R8D5 127 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms