RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 GATAD1Q8WUU5 269 aa9.1□□□□□ -0.95
SF3B3-208ENST00000567250 UHRF2Q96PU4 802 aa9.1□□□□□ -0.95
SF3B3-208ENST00000567250 SCRT1Q9BWW7 348 aa9.1□□□□□ -0.95
SF3B3-208ENST00000567250 SLC25A32Q9H2D1 315 aa9.1□□□□□ -0.95
SF3B3-208ENST00000567250 TUBA4BQ9H853 241 aa9.1□□□□□ -0.95
SF3B3-208ENST00000567250 SEPSECSQ9HD40 501 aaKnown RBP9.1□□□□□ -0.95
SF3B3-208ENST00000567250 hCG_2014768A0A024R1R8 64 aa9.09□□□□□ -0.95
SF3B3-208ENST00000567250 BORCS7-ASMTA0A0B4J1R7 106 aa9.09□□□□□ -0.95
SF3B3-208ENST00000567250 K7EQG2 157 aa9.09□□□□□ -0.95
SF3B3-208ENST00000567250 TAAR5O14804 337 aa9.09□□□□□ -0.95
SF3B3-208ENST00000567250 ATF4P18848 351 aaPredicted RBP9.09□□□□□ -0.95
SF3B3-208ENST00000567250 ID1P41134 155 aa9.09□□□□□ -0.95
SF3B3-208ENST00000567250 ODF3L2Q3SX64 289 aa9.09□□□□□ -0.95
SF3B3-208ENST00000567250 AKAP14Q86UN6 197 aa9.09□□□□□ -0.95
SF3B3-208ENST00000567250 BPIFA4PQ86YQ2 179 aa9.09□□□□□ -0.95
SF3B3-208ENST00000567250 WFDC3Q8IUB2 231 aa9.09□□□□□ -0.95
SF3B3-208ENST00000567250 DCANP1Q8TF63 244 aa9.09□□□□□ -0.95
SF3B3-208ENST00000567250 MFFQ9GZY8 342 aa9.09□□□□□ -0.95
SF3B3-208ENST00000567250 SRD5A3Q9H8P0 318 aa9.09□□□□□ -0.95
SF3B3-208ENST00000567250 MAP6D1Q9H9H5 199 aa9.09□□□□□ -0.95
SF3B3-208ENST00000567250 DNAJC4Q9NNZ3 241 aa9.09□□□□□ -0.95
SF3B3-208ENST00000567250 TIMM9Q9Y5J7 89 aa9.09□□□□□ -0.95
SF3B3-208ENST00000567250 HMSDA8MTL9 139 aa9.08□□□□□ -0.96
SF3B3-208ENST00000567250 SMLR1H3BR10 107 aa9.08□□□□□ -0.96
SF3B3-208ENST00000567250 FRMD6-AS1P0C7T7 363 aa9.08□□□□□ -0.96
SF3B3-208ENST00000567250 PATE2Q6UY27 113 aa9.08□□□□□ -0.96
SF3B3-208ENST00000567250 TCTE3Q8IZS6 198 aa9.08□□□□□ -0.96
SF3B3-208ENST00000567250 TMEM37Q8WXS4 190 aa9.08□□□□□ -0.96
SF3B3-208ENST00000567250 B9D2Q9BPU9 175 aa9.08□□□□□ -0.96
SF3B3-208ENST00000567250 RSG1Q9BU20 258 aa9.08□□□□□ -0.96
SF3B3-208ENST00000567250 MRPL32Q9BYC8 188 aaKnown RBP9.08□□□□□ -0.96
SF3B3-208ENST00000567250 UBQLN2Q9UHD9 624 aa9.08□□□□□ -0.96
SF3B3-208ENST00000567250 JTBO76095 146 aa9.07□□□□□ -0.96
SF3B3-208ENST00000567250 PSMB3P49720 205 aa9.07□□□□□ -0.96
SF3B3-208ENST00000567250 FFAR4Q5NUL3 377 aa9.07□□□□□ -0.96
SF3B3-208ENST00000567250 LEMD1Q68G75 181 aa9.07□□□□□ -0.96
SF3B3-208ENST00000567250 DEFB125Q8N687 156 aa9.07□□□□□ -0.96
SF3B3-208ENST00000567250 PSMG3Q9BT73 122 aaPredicted RBP9.07□□□□□ -0.96
SF3B3-208ENST00000567250 WFDC10AQ9H1F0 79 aa9.07□□□□□ -0.96
SF3B3-208ENST00000567250 C19orf73Q9NVV2 129 aa9.07□□□□□ -0.96
SF3B3-208ENST00000567250 A0A087X0K7 114 aa9.06□□□□□ -0.96
SF3B3-208ENST00000567250 A0A0D9SG52 128 aa9.06□□□□□ -0.96
SF3B3-208ENST00000567250 ISLRO14498 428 aa9.06□□□□□ -0.96
SF3B3-208ENST00000567250 ZNF688P0C7X2 276 aa9.06□□□□□ -0.96
SF3B3-208ENST00000567250 CXCL2P19875 107 aa9.06□□□□□ -0.96
SF3B3-208ENST00000567250 DEFB131AP59861 70 aa9.06□□□□□ -0.96
SF3B3-208ENST00000567250 ACOT6Q3I5F7 207 aaPredicted RBP9.06□□□□□ -0.96
SF3B3-208ENST00000567250 FAM78BQ5VT40 261 aa9.06□□□□□ -0.96
SF3B3-208ENST00000567250 LCN15Q6UWW0 184 aa9.06□□□□□ -0.96
SF3B3-208ENST00000567250 HSD17B11Q8NBQ5 300 aa9.06□□□□□ -0.96
SF3B3-208ENST00000567250 GNPNAT1Q96EK6 184 aaPredicted RBP9.06□□□□□ -0.96
SF3B3-208ENST00000567250 ST6GAL2Q96JF0 529 aa9.06□□□□□ -0.96
SF3B3-208ENST00000567250 WFDC1Q9HC57 220 aa9.06□□□□□ -0.96
SF3B3-208ENST00000567250 LOC102724200A0A096LPH7 203 aaPredicted RBP9.05□□□□□ -0.96
SF3B3-208ENST00000567250 KANTRA0A1W2PQU2 76 aa9.05□□□□□ -0.96
SF3B3-208ENST00000567250 MBP02144 154 aa9.05□□□□□ -0.96
SF3B3-208ENST00000567250 TAS2R45P59539 299 aa9.05□□□□□ -0.96
SF3B3-208ENST00000567250 RHOBP62745 196 aa9.05□□□□□ -0.96
SF3B3-208ENST00000567250 SERF2P84101 59 aa9.05□□□□□ -0.96
SF3B3-208ENST00000567250 PSMG4Q5JS54 123 aa9.05□□□□□ -0.96
SF3B3-208ENST00000567250 KCNRGQ8N5I3 272 aa9.05□□□□□ -0.96
SF3B3-208ENST00000567250 OR2G3Q8NGZ4 309 aa9.05□□□□□ -0.96
SF3B3-208ENST00000567250 LRRC20Q8TCA0 184 aa9.05□□□□□ -0.96
SF3B3-208ENST00000567250 C16orf92Q96LL3 132 aa9.05□□□□□ -0.96
SF3B3-208ENST00000567250 ARPC5LQ9BPX5 153 aa9.05□□□□□ -0.96
SF3B3-208ENST00000567250 SLC50A1Q9BRV3 221 aa9.05□□□□□ -0.96
SF3B3-208ENST00000567250 SOCS3O14543 225 aa9.04□□□□□ -0.96
SF3B3-208ENST00000567250 PFDN1O60925 122 aa9.04□□□□□ -0.96
SF3B3-208ENST00000567250 C1QBP02746 253 aa9.04□□□□□ -0.96
SF3B3-208ENST00000567250 M6PRP20645 277 aa9.04□□□□□ -0.96
SF3B3-208ENST00000567250 ATP6V0CP27449 155 aa9.04□□□□□ -0.96
SF3B3-208ENST00000567250 APOC4P55056 127 aa9.04□□□□□ -0.96
SF3B3-208ENST00000567250 EIF5AP63241 154 aaKnown RBP9.04□□□□□ -0.96
SF3B3-208ENST00000567250 GUK1Q16774 197 aa9.04□□□□□ -0.96
SF3B3-208ENST00000567250 KHDC3LQ587J8 217 aa9.04□□□□□ -0.96
SF3B3-208ENST00000567250 RPL7L1Q6DKI1 246 aaKnown RBP9.04□□□□□ -0.96
SF3B3-208ENST00000567250 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.04□□□□□ -0.96
SF3B3-208ENST00000567250 APRG1Q8IVJ8 170 aa9.04□□□□□ -0.96
SF3B3-208ENST00000567250 FAM24BQ8N5W8 94 aa9.04□□□□□ -0.96
SF3B3-208ENST00000567250 HYLS1Q96M11 299 aa9.04□□□□□ -0.96
SF3B3-208ENST00000567250 TMEM14CQ9P0S9 112 aa9.04□□□□□ -0.96
SF3B3-208ENST00000567250 FUT9Q9Y231 359 aa9.04□□□□□ -0.96
SF3B3-208ENST00000567250 A0A1W2PPV4 95 aa9.03□□□□□ -0.96
SF3B3-208ENST00000567250 BCL2L11O43521 198 aa9.03□□□□□ -0.96
SF3B3-208ENST00000567250 NHLRC4P0CG21 123 aaPredicted RBP9.03□□□□□ -0.96
SF3B3-208ENST00000567250 GCSAMLQ5JQS6 135 aa9.03□□□□□ -0.96
SF3B3-208ENST00000567250 STHQ8IWL8 128 aa9.03□□□□□ -0.96
SF3B3-208ENST00000567250 OR11H4Q8NGC9 324 aa9.03□□□□□ -0.96
SF3B3-208ENST00000567250 HRH4Q9H3N8 390 aa9.03□□□□□ -0.96
SF3B3-208ENST00000567250 RPRMQ9NS64 109 aa9.03□□□□□ -0.96
SF3B3-208ENST00000567250 CLEC5AQ9NY25 188 aa9.03□□□□□ -0.96
SF3B3-208ENST00000567250 MRPS12O15235 138 aaKnown RBP9.02□□□□□ -0.97
SF3B3-208ENST00000567250 OR7C2O60412 319 aa9.02□□□□□ -0.97
SF3B3-208ENST00000567250 ZNF253O75346 499 aa9.02□□□□□ -0.97
SF3B3-208ENST00000567250 IGLC2P0DOY2 106 aa9.02□□□□□ -0.97
SF3B3-208ENST00000567250 C4BPBP20851 252 aa9.02□□□□□ -0.97
SF3B3-208ENST00000567250 PDE6HQ13956 83 aa9.02□□□□□ -0.97
SF3B3-208ENST00000567250 MORN5Q5VZ52 161 aa9.02□□□□□ -0.97
SF3B3-208ENST00000567250 SPATA31B1PQ5VZV4 182 aa9.02□□□□□ -0.97
SF3B3-208ENST00000567250 LINC00322Q6ZN03 302 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms