RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 TBC1D24Q9ULP9 559 aa7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 GIG44P09565 113 aaPredicted RBP7.35□□□□□ -1.23
GTF3C1-206ENST00000566779 LINC00869P0C866 280 aa7.35□□□□□ -1.23
GTF3C1-206ENST00000566779 PRB4P10163 310 aaPredicted RBP7.35□□□□□ -1.23
GTF3C1-206ENST00000566779 HLA-DRB4P13762 266 aa7.35□□□□□ -1.23
GTF3C1-206ENST00000566779 PSMB3P49720 205 aa7.35□□□□□ -1.23
GTF3C1-206ENST00000566779 EMP1P54849 157 aa7.35□□□□□ -1.23
GTF3C1-206ENST00000566779 RAP2BP61225 183 aa7.35□□□□□ -1.23
GTF3C1-206ENST00000566779 TMEM41BQ5BJD5 291 aa7.35□□□□□ -1.23
GTF3C1-206ENST00000566779 OR10P1Q8NGE3 313 aa7.35□□□□□ -1.23
GTF3C1-206ENST00000566779 MITD1Q8WV92 249 aa7.35□□□□□ -1.23
GTF3C1-206ENST00000566779 UHRF2Q96PU4 802 aa7.35□□□□□ -1.23
GTF3C1-206ENST00000566779 HLA-DRB4X5D2U9 266 aa7.35□□□□□ -1.23
GTF3C1-206ENST00000566779 FAM240BA0A1B0GVZ2 78 aa7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 ZNF98A6NK75 572 aa7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 H3BMM0 161 aa7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 MBPP02686 304 aaPredicted RBP7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 RBMY1A1P0DJD3 496 aaKnown RBP7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 RBMY1CP0DJD4 496 aa7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 MIFP14174 115 aa7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 CAV2P51636 162 aa7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 RBMY1FQ15415 496 aaKnown RBP7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 C1orf194Q5T5A4 169 aa7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 IGFL4Q6B9Z1 124 aa7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 MZT2BQ6NZ67 158 aa7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 EBLN2Q6P2I7 272 aa7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 TMEM144Q7Z5S9 345 aa7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 RNF182Q8N6D2 247 aa7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 Q8NAQ8 132 aa7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 ZNF431Q8TF32 576 aaPredicted RBP7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 SMIM8Q96KF7 97 aa7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 C1QTNF4Q9BXJ3 329 aa7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 SLC35B3Q9H1N7 401 aa7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 HIGD1AQ9Y241 93 aa7.34□□□□□ -1.23
GTF3C1-206ENST00000566779 IGLL5B9A064 214 aa7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 ISLRO14498 428 aa7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 HYPMO75409 117 aa7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 CFDP00746 253 aaPredicted RBP7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 SNRPCP09234 159 aaKnown RBP7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 HLA-DMBP28068 263 aa7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 S100A7P31151 101 aa7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 DLK1P80370 383 aa7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 CNPY1Q3B7I2 92 aa7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 FAM78BQ5VT40 261 aa7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 FOXI2Q6ZQN5 318 aa7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 C12orf45Q8N5I9 185 aaPredicted RBP7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 ZNF738Q8NE65 137 aa7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 ENKURQ8TC29 256 aa7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 LRRC20Q8TCA0 184 aa7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 C20orf173Q96LM9 149 aa7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 CCDC32Q9BV29 185 aa7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 ARL6Q9H0F7 186 aa7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 SAV1Q9H4B6 383 aaPredicted RBP7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 RPRMQ9NS64 109 aa7.33□□□□□ -1.24
GTF3C1-206ENST00000566779 H3BRN7 92 aa7.32□□□□□ -1.24
GTF3C1-206ENST00000566779 K7EPK0 472 aa7.32□□□□□ -1.24
GTF3C1-206ENST00000566779 SOCS3O14543 225 aa7.32□□□□□ -1.24
GTF3C1-206ENST00000566779 GOSR2O14653 212 aa7.32□□□□□ -1.24
GTF3C1-206ENST00000566779 TSC22D2O75157 780 aa7.32□□□□□ -1.24
GTF3C1-206ENST00000566779 CST7O76096 145 aa7.32□□□□□ -1.24
GTF3C1-206ENST00000566779 ZNF705DP0CH99 300 aaPredicted RBP7.32□□□□□ -1.24
GTF3C1-206ENST00000566779 ZNF705BP0CI00 300 aaPredicted RBP7.32□□□□□ -1.24
GTF3C1-206ENST00000566779 MEOX2P50222 304 aa7.32□□□□□ -1.24
GTF3C1-206ENST00000566779 PAX9P55771 341 aa7.32□□□□□ -1.24
GTF3C1-206ENST00000566779 TMEM14EPQ6UXP3 125 aa7.32□□□□□ -1.24
GTF3C1-206ENST00000566779 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.32□□□□□ -1.24
GTF3C1-206ENST00000566779 Q6ZTC4 211 aa7.32□□□□□ -1.24
GTF3C1-206ENST00000566779 C2CD4CQ8TF44 421 aa7.32□□□□□ -1.24
GTF3C1-206ENST00000566779 TMEM208Q9BTX3 173 aa7.32□□□□□ -1.24
GTF3C1-206ENST00000566779 SLC25A39Q9BZJ4 359 aaPredicted RBP7.32□□□□□ -1.24
GTF3C1-206ENST00000566779 CELA1Q9UNI1 258 aa7.32□□□□□ -1.24
GTF3C1-206ENST00000566779 UBE2L5PA0A1B0GUS4 154 aa7.31□□□□□ -1.24
GTF3C1-206ENST00000566779 C7orf66A4D0T2 115 aa7.31□□□□□ -1.24
GTF3C1-206ENST00000566779 FAM24AA6NFZ4 105 aa7.31□□□□□ -1.24
GTF3C1-206ENST00000566779 PMS2P5A8MQ11 134 aa7.31□□□□□ -1.24
GTF3C1-206ENST00000566779 COX7A2P2O60397 106 aa7.31□□□□□ -1.24
GTF3C1-206ENST00000566779 DEDDO75618 318 aa7.31□□□□□ -1.24
GTF3C1-206ENST00000566779 PVALBP20472 110 aaPredicted RBP7.31□□□□□ -1.24
GTF3C1-206ENST00000566779 ARL16Q0P5N6 197 aa7.31□□□□□ -1.24
GTF3C1-206ENST00000566779 ZNF546Q86UE3 836 aa7.31□□□□□ -1.24
GTF3C1-206ENST00000566779 S100ZQ8WXG8 99 aa7.31□□□□□ -1.24
GTF3C1-206ENST00000566779 SHANK2-AS3Q9BTD1 123 aa7.31□□□□□ -1.24
GTF3C1-206ENST00000566779 SEPSECSQ9HD40 501 aaKnown RBP7.31□□□□□ -1.24
GTF3C1-206ENST00000566779 PPP1R14DQ9NXH3 145 aa7.31□□□□□ -1.24
GTF3C1-206ENST00000566779 SLC45A2Q9UMX9 530 aa7.31□□□□□ -1.24
GTF3C1-206ENST00000566779 SACSQ9NZJ4 4579 aa7.31□□□□□ -1.24
GTF3C1-206ENST00000566779 A0A0J9YX75 114 aa7.3□□□□□ -1.24
GTF3C1-206ENST00000566779 ZNF705EA8MWA4 302 aaPredicted RBP7.3□□□□□ -1.24
GTF3C1-206ENST00000566779 H3BTX0 84 aa7.3□□□□□ -1.24
GTF3C1-206ENST00000566779 AGPAT2O15120 278 aa7.3□□□□□ -1.24
GTF3C1-206ENST00000566779 HTN3P15516 51 aa7.3□□□□□ -1.24
GTF3C1-206ENST00000566779 RPL7P18124 248 aaKnown RBP7.3□□□□□ -1.24
GTF3C1-206ENST00000566779 TAS2R30P59541 319 aa7.3□□□□□ -1.24
GTF3C1-206ENST00000566779 SELENOTP62341 195 aa7.3□□□□□ -1.24
GTF3C1-206ENST00000566779 RHOBP62745 196 aa7.3□□□□□ -1.24
GTF3C1-206ENST00000566779 PSG9Q00887 426 aa7.3□□□□□ -1.24
GTF3C1-206ENST00000566779 HIST1H1AQ02539 215 aaPredicted RBP7.3□□□□□ -1.24
GTF3C1-206ENST00000566779 BAXQ07812 192 aa7.3□□□□□ -1.24
GTF3C1-206ENST00000566779 SAMD13Q5VXD3 122 aa7.3□□□□□ -1.24
GTF3C1-206ENST00000566779 RPP25LQ8N5L8 163 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms