RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 C20orf173Q96LM9 149 aa14.46□□□□□ -0.09
CLN6-207ENST00000566347 PMS2P5A8MQ11 134 aa14.45□□□□□ -0.1
CLN6-207ENST00000566347 A8MTW9 85 aa14.45□□□□□ -0.1
CLN6-207ENST00000566347 FNDC10F2Z333 226 aa14.45□□□□□ -0.1
CLN6-207ENST00000566347 H3BRN7 92 aa14.45□□□□□ -0.1
CLN6-207ENST00000566347 BTCP35070 178 aa14.45□□□□□ -0.1
CLN6-207ENST00000566347 EMP1P54849 157 aa14.45□□□□□ -0.1
CLN6-207ENST00000566347 DLK1P80370 383 aa14.45□□□□□ -0.1
CLN6-207ENST00000566347 IAH1Q2TAA2 248 aaPredicted RBP14.45□□□□□ -0.1
CLN6-207ENST00000566347 S100A7AQ86SG5 101 aa14.45□□□□□ -0.1
CLN6-207ENST00000566347 C17orf77Q96MU5 243 aa14.45□□□□□ -0.1
CLN6-207ENST00000566347 NDUFAF3Q9BU61 184 aa14.45□□□□□ -0.1
CLN6-207ENST00000566347 SCRT1Q9BWW7 348 aa14.45□□□□□ -0.1
CLN6-207ENST00000566347 SLC25A39Q9BZJ4 359 aaPredicted RBP14.45□□□□□ -0.1
CLN6-207ENST00000566347 HIGD1AQ9Y241 93 aa14.45□□□□□ -0.1
CLN6-207ENST00000566347 HYPMO75409 117 aa14.44□□□□□ -0.1
CLN6-207ENST00000566347 HBE1P02100 147 aa14.44□□□□□ -0.1
CLN6-207ENST00000566347 IL7P13232 177 aa14.44□□□□□ -0.1
CLN6-207ENST00000566347 RPL7P18124 248 aaKnown RBP14.44□□□□□ -0.1
CLN6-207ENST00000566347 TAS2R30P59541 319 aa14.44□□□□□ -0.1
CLN6-207ENST00000566347 PLP1P60201 277 aa14.44□□□□□ -0.1
CLN6-207ENST00000566347 TMEM14EPQ6UXP3 125 aa14.44□□□□□ -0.1
CLN6-207ENST00000566347 SHANK2-AS3Q9BTD1 123 aa14.44□□□□□ -0.1
CLN6-207ENST00000566347 TSC22D2O75157 780 aa14.43□□□□□ -0.1
CLN6-207ENST00000566347 DUSP14O95147 198 aaKnown RBP14.43□□□□□ -0.1
CLN6-207ENST00000566347 SCGB1D2O95969 90 aa14.43□□□□□ -0.1
CLN6-207ENST00000566347 LINC00869P0C866 280 aa14.43□□□□□ -0.1
CLN6-207ENST00000566347 OR10P1Q8NGE3 313 aa14.43□□□□□ -0.1
CLN6-207ENST00000566347 MITD1Q8WV92 249 aa14.43□□□□□ -0.1
CLN6-207ENST00000566347 NPVFQ9HCQ7 196 aa14.43□□□□□ -0.1
CLN6-207ENST00000566347 MGAT4CQ9UBM8 478 aa14.43□□□□□ -0.1
CLN6-207ENST00000566347 DKK2Q9UBU2 259 aa14.43□□□□□ -0.1
CLN6-207ENST00000566347 METTL15P1P0C7V9 234 aa14.42□□□□□ -0.1
CLN6-207ENST00000566347 P0DMU3 169 aa14.42□□□□□ -0.1
CLN6-207ENST00000566347 FAM231AP0DMU4 169 aa14.42□□□□□ -0.1
CLN6-207ENST00000566347 FAM231CP0DMU5 169 aa14.42□□□□□ -0.1
CLN6-207ENST00000566347 RRAS2P62070 204 aaPredicted RBP14.42□□□□□ -0.1
CLN6-207ENST00000566347 C1orf158Q8N1D5 194 aa14.42□□□□□ -0.1
CLN6-207ENST00000566347 ZBTB8BQ8NAP8 495 aaPredicted RBP14.42□□□□□ -0.1
CLN6-207ENST00000566347 IGF2BP2-AS1Q96M15 143 aa14.42□□□□□ -0.1
CLN6-207ENST00000566347 RNF24Q9Y225 148 aa14.42□□□□□ -0.1
CLN6-207ENST00000566347 K7EPK0 472 aa14.41□□□□□ -0.1
CLN6-207ENST00000566347 OR5G3P0C626 314 aa14.41□□□□□ -0.1
CLN6-207ENST00000566347 FGL1Q08830 312 aa14.41□□□□□ -0.1
CLN6-207ENST00000566347 RRN3P1Q2M238 152 aa14.41□□□□□ -0.1
CLN6-207ENST00000566347 FAM222AQ5U5X8 452 aa14.41□□□□□ -0.1
CLN6-207ENST00000566347 TEPPQ6URK8 271 aa14.41□□□□□ -0.1
CLN6-207ENST00000566347 AMTNQ6UX39 209 aa14.41□□□□□ -0.1
CLN6-207ENST00000566347 FAM210BQ96KR6 192 aa14.41□□□□□ -0.1
CLN6-207ENST00000566347 NIPSNAP3BQ9BS92 247 aa14.41□□□□□ -0.1
CLN6-207ENST00000566347 TMEM208Q9BTX3 173 aa14.41□□□□□ -0.1
CLN6-207ENST00000566347 GSKIPQ9P0R6 139 aa14.41□□□□□ -0.1
CLN6-207ENST00000566347 TRAV8-2A0A0B4J237 113 aa14.4□□□□□ -0.1
CLN6-207ENST00000566347 LOC102723971A0A1B0GUV8 181 aa14.4□□□□□ -0.1
CLN6-207ENST00000566347 CCNKO75909 580 aa14.4□□□□□ -0.1
CLN6-207ENST00000566347 CNN1P51911 297 aaKnown RBP14.4□□□□□ -0.1
CLN6-207ENST00000566347 OXA1LQ15070 435 aa14.4□□□□□ -0.1
CLN6-207ENST00000566347 PXDC1Q5TGL8 231 aa14.4□□□□□ -0.1
CLN6-207ENST00000566347 C20orf85Q9H1P6 137 aa14.4□□□□□ -0.1
CLN6-207ENST00000566347 RCL1Q9Y2P8 373 aaKnown RBP14.4□□□□□ -0.1
CLN6-207ENST00000566347 RNF182Q8N6D2 247 aa14.39□□□□□ -0.11
CLN6-207ENST00000566347 POM121L12Q8N7R1 296 aa14.39□□□□□ -0.11
CLN6-207ENST00000566347 ZNF738Q8NE65 137 aa14.39□□□□□ -0.11
CLN6-207ENST00000566347 OR11H7Q8NGC8 314 aa14.39□□□□□ -0.11
CLN6-207ENST00000566347 UHRF2Q96PU4 802 aa14.39□□□□□ -0.11
CLN6-207ENST00000566347 GGACTQ9BVM4 153 aa14.39□□□□□ -0.11
CLN6-207ENST00000566347 ARL6Q9H0F7 186 aa14.39□□□□□ -0.11
CLN6-207ENST00000566347 A0A087X0K7 114 aa14.38□□□□□ -0.11
CLN6-207ENST00000566347 LYRM1O43325 122 aa14.38□□□□□ -0.11
CLN6-207ENST00000566347 INSP01308 110 aa14.38□□□□□ -0.11
CLN6-207ENST00000566347 ZNF846Q147U1 533 aa14.38□□□□□ -0.11
CLN6-207ENST00000566347 IGFL4Q6B9Z1 124 aa14.38□□□□□ -0.11
CLN6-207ENST00000566347 ZNF546Q86UE3 836 aa14.38□□□□□ -0.11
CLN6-207ENST00000566347 NDUFA13Q9P0J0 144 aa14.38□□□□□ -0.11
CLN6-207ENST00000566347 YTHDF2Q9Y5A9 579 aaKnown RBP14.38□□□□□ -0.11
CLN6-207ENST00000566347 C7orf66A4D0T2 115 aa14.37□□□□□ -0.11
CLN6-207ENST00000566347 GOSR2O14653 212 aa14.37□□□□□ -0.11
CLN6-207ENST00000566347 PLA2G10O15496 165 aa14.37□□□□□ -0.11
CLN6-207ENST00000566347 MBPP02686 304 aaPredicted RBP14.37□□□□□ -0.11
CLN6-207ENST00000566347 B2MP61769 119 aa14.37□□□□□ -0.11
CLN6-207ENST00000566347 SLC38A11Q08AI6 406 aa14.37□□□□□ -0.11
CLN6-207ENST00000566347 SPINK13Q1W4C9 94 aa14.37□□□□□ -0.11
CLN6-207ENST00000566347 LRRC20Q8TCA0 184 aa14.37□□□□□ -0.11
CLN6-207ENST00000566347 ARV1Q9H2C2 271 aa14.37□□□□□ -0.11
CLN6-207ENST00000566347 L7N2F9 121 aa14.36□□□□□ -0.11
CLN6-207ENST00000566347 CXCL3P19876 107 aa14.36□□□□□ -0.11
CLN6-207ENST00000566347 VAMP2P63027 116 aa14.36□□□□□ -0.11
CLN6-207ENST00000566347 HECTD4Q9Y4D8 3996 aa14.35□□□□□ -0.11
CLN6-207ENST00000566347 BOLA2-SMG1P6H3BVE0 249 aa14.35□□□□□ -0.11
CLN6-207ENST00000566347 M0R2Z0 102 aa14.35□□□□□ -0.11
CLN6-207ENST00000566347 AGPAT2O15120 278 aa14.35□□□□□ -0.11
CLN6-207ENST00000566347 CRXO43186 299 aaPredicted RBP14.35□□□□□ -0.11
CLN6-207ENST00000566347 TCRBP04435 133 aa14.35□□□□□ -0.11
CLN6-207ENST00000566347 CXCL2P19875 107 aa14.35□□□□□ -0.11
CLN6-207ENST00000566347 ARL16Q0P5N6 197 aa14.35□□□□□ -0.11
CLN6-207ENST00000566347 PSG3Q16557 428 aa14.35□□□□□ -0.11
CLN6-207ENST00000566347 PATE2Q6UY27 113 aa14.35□□□□□ -0.11
CLN6-207ENST00000566347 CCSO14618 274 aa14.34□□□□□ -0.11
CLN6-207ENST00000566347 DAD1P61803 113 aa14.34□□□□□ -0.11
CLN6-207ENST00000566347 HIST1H1AQ02539 215 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms