RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 IGKV3-7A0A075B6H7 116 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 ELOA3CA0A087WX78 387 aaPredicted RBP6.09□□□□□ -1.43
CDH13-208ENST00000566333 TRAV2A0A0B4J234 112 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 A0A0D9SG52 128 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 HELTA6NFD8 242 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 C17orf112F2Z3M2 114 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 K7EQG2 157 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 TAAR5O14804 337 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 CD5P06127 495 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 RAB2AP61019 212 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 GUCA2BQ16661 112 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 FFAR4Q5NUL3 377 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 SPATA31B1PQ5VZV4 182 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 LAMTOR1Q6IAA8 161 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 Q6ZRG5 221 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 RBPMS2Q6ZRY4 209 aaKnown RBP6.09□□□□□ -1.43
CDH13-208ENST00000566333 GBGT1Q8N5D6 347 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 ZNF709Q8N972 641 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 STXBP6Q8NFX7 210 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 OR1L4Q8NGR5 311 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 SCGB1C1Q8TD33 95 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 GATAD1Q8WUU5 269 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 PPP1R14BQ96C90 147 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 GRAMD2BQ96HH9 432 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 PFDN5Q99471 154 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 ARPC5LQ9BPX5 153 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 SEPSECSQ9HD40 501 aaKnown RBP6.09□□□□□ -1.43
CDH13-208ENST00000566333 DNAJC4Q9NNZ3 241 aa6.09□□□□□ -1.43
CDH13-208ENST00000566333 A0A087X0K7 114 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 BORCS7-ASMTA0A0B4J1R7 106 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 TRAV5A0A0B4J249 113 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 OR4C46A6NHA9 309 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 JTBO76095 146 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 SPP1P10451 314 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 TFPI2P48307 235 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 NKX2-5P52952 324 aaPredicted RBP6.08□□□□□ -1.44
CDH13-208ENST00000566333 CD81P60033 236 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 DEFA6Q01524 100 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 ZFP69Q49AA0 526 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 TMUB2Q71RG4 321 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 MIR17HGQ75NE6 70 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 OR8I2Q8N0Y5 310 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 STOML3Q8TAV4 291 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 FAM167A-AS1Q96KT0 104 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 HYLS1Q96M11 299 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 SLC25A2Q9BXI2 301 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 MAP6D1Q9H9H5 199 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 NRN1Q9NPD7 142 aa6.08□□□□□ -1.44
CDH13-208ENST00000566333 ZMAT5Q9UDW3 170 aaKnown RBP6.08□□□□□ -1.44
CDH13-208ENST00000566333 EIF3GO75821 320 aaKnown RBP eCLIP6.07□□□□□ -1.44
CDH13-208ENST00000566333 IGLC2P0DOY2 106 aa6.07□□□□□ -1.44
CDH13-208ENST00000566333 RPL7P18124 248 aaKnown RBP6.07□□□□□ -1.44
CDH13-208ENST00000566333 M6PRP20645 277 aa6.07□□□□□ -1.44
CDH13-208ENST00000566333 FAM78BQ5VT40 261 aa6.07□□□□□ -1.44
CDH13-208ENST00000566333 SSX7Q7RTT5 188 aa6.07□□□□□ -1.44
CDH13-208ENST00000566333 GTSCR1Q86UQ5 136 aa6.07□□□□□ -1.44
CDH13-208ENST00000566333 GNPNAT1Q96EK6 184 aaPredicted RBP6.07□□□□□ -1.44
CDH13-208ENST00000566333 ZNF503Q96F45 646 aa6.07□□□□□ -1.44
CDH13-208ENST00000566333 GPR82Q96P67 336 aa6.07□□□□□ -1.44
CDH13-208ENST00000566333 CITED4Q96RK1 184 aa6.07□□□□□ -1.44
CDH13-208ENST00000566333 FAM110AQ9BQ89 295 aa6.07□□□□□ -1.44
CDH13-208ENST00000566333 MRPL32Q9BYC8 188 aaKnown RBP6.07□□□□□ -1.44
CDH13-208ENST00000566333 PLA2G2EQ9NZK7 142 aa6.07□□□□□ -1.44
CDH13-208ENST00000566333 UBQLN2Q9UHD9 624 aa6.07□□□□□ -1.44
CDH13-208ENST00000566333 PFDN2Q9UHV9 154 aa6.07□□□□□ -1.44
CDH13-208ENST00000566333 FUT9Q9Y231 359 aa6.07□□□□□ -1.44
CDH13-208ENST00000566333 TRAV8-2A0A0B4J237 113 aa6.06□□□□□ -1.44
CDH13-208ENST00000566333 KANTRA0A1W2PQU2 76 aa6.06□□□□□ -1.44
CDH13-208ENST00000566333 H3BQ15 152 aa6.06□□□□□ -1.44
CDH13-208ENST00000566333 SLC17A3O00476 420 aa6.06□□□□□ -1.44
CDH13-208ENST00000566333 PFDN1O60925 122 aa6.06□□□□□ -1.44
CDH13-208ENST00000566333 ZNF688P0C7X2 276 aa6.06□□□□□ -1.44
CDH13-208ENST00000566333 IGHV4-30-4P0DP06 118 aa6.06□□□□□ -1.44
CDH13-208ENST00000566333 PYYP10082 97 aa6.06□□□□□ -1.44
CDH13-208ENST00000566333 S100A7P31151 101 aa6.06□□□□□ -1.44
CDH13-208ENST00000566333 GALR1P47211 349 aa6.06□□□□□ -1.44
CDH13-208ENST00000566333 RPL11P62913 178 aaKnown RBP6.06□□□□□ -1.44
CDH13-208ENST00000566333 SERF2P84101 59 aa6.06□□□□□ -1.44
CDH13-208ENST00000566333 ZNF726P1Q15940 193 aa6.06□□□□□ -1.44
CDH13-208ENST00000566333 ZNF124Q15973 351 aa6.06□□□□□ -1.44
CDH13-208ENST00000566333 WFDC3Q8IUB2 231 aa6.06□□□□□ -1.44
CDH13-208ENST00000566333 RPP25LQ8N5L8 163 aaKnown RBP6.06□□□□□ -1.44
CDH13-208ENST00000566333 DEFB125Q8N687 156 aa6.06□□□□□ -1.44
CDH13-208ENST00000566333 C20orf173Q96LM9 149 aa6.06□□□□□ -1.44
CDH13-208ENST00000566333 ZNF471Q9BX82 626 aaPredicted RBP6.06□□□□□ -1.44
CDH13-208ENST00000566333 TMEM14CQ9P0S9 112 aa6.06□□□□□ -1.44
CDH13-208ENST00000566333 A8MZ25 164 aa6.05□□□□□ -1.44
CDH13-208ENST00000566333 OR11H12B2RN74 326 aa6.05□□□□□ -1.44
CDH13-208ENST00000566333 H3BTX0 84 aa6.05□□□□□ -1.44
CDH13-208ENST00000566333 BOLA2-SMG1P6H3BVE0 249 aa6.05□□□□□ -1.44
CDH13-208ENST00000566333 DNASE2O00115 360 aaPredicted RBP6.05□□□□□ -1.44
CDH13-208ENST00000566333 ISLRO14498 428 aa6.05□□□□□ -1.44
CDH13-208ENST00000566333 SNRPCP09234 159 aaKnown RBP6.05□□□□□ -1.44
CDH13-208ENST00000566333 ATF4P18848 351 aaPredicted RBP6.05□□□□□ -1.44
CDH13-208ENST00000566333 PSMB3P49720 205 aa6.05□□□□□ -1.44
CDH13-208ENST00000566333 MEOX2P50222 304 aa6.05□□□□□ -1.44
CDH13-208ENST00000566333 RHOBP62745 196 aa6.05□□□□□ -1.44
CDH13-208ENST00000566333 PAFAH1B2P68402 229 aa6.05□□□□□ -1.44
CDH13-208ENST00000566333 ACOT6Q3I5F7 207 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms