RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ANXA7P20073 488 aaKnown RBP13.07□□□□□ -0.32
USB1-213ENST00000566292 IGFL4Q6B9Z1 124 aa13.07□□□□□ -0.32
USB1-213ENST00000566292 DKK2Q9UBU2 259 aa13.07□□□□□ -0.32
USB1-213ENST00000566292 IFNA21P01568 189 aa13.06□□□□□ -0.32
USB1-213ENST00000566292 FAM222AQ5U5X8 452 aa13.06□□□□□ -0.32
USB1-213ENST00000566292 SMIM8Q96KF7 97 aa13.06□□□□□ -0.32
USB1-213ENST00000566292 GPR82Q96P67 336 aa13.06□□□□□ -0.32
USB1-213ENST00000566292 SHANK2-AS3Q9BTD1 123 aa13.06□□□□□ -0.32
USB1-213ENST00000566292 NDUFAF3Q9BU61 184 aa13.06□□□□□ -0.32
USB1-213ENST00000566292 SLC25A39Q9BZJ4 359 aaPredicted RBP13.06□□□□□ -0.32
USB1-213ENST00000566292 PLA2G2EQ9NZK7 142 aa13.06□□□□□ -0.32
USB1-213ENST00000566292 GOLT1BQ9Y3E0 138 aa13.06□□□□□ -0.32
USB1-213ENST00000566292 DNAH2Q9P225 4427 aa13.05□□□□□ -0.32
USB1-213ENST00000566292 DNAH17Q9UFH2 4485 aa13.05□□□□□ -0.32
USB1-213ENST00000566292 IL5P05113 134 aa13.05□□□□□ -0.32
USB1-213ENST00000566292 RRAS2P62070 204 aaPredicted RBP13.05□□□□□ -0.32
USB1-213ENST00000566292 TMEM14EPQ6UXP3 125 aa13.05□□□□□ -0.32
USB1-213ENST00000566292 C7orf50Q9BRJ6 194 aaKnown RBP13.05□□□□□ -0.32
USB1-213ENST00000566292 FAT2Q9NYQ8 4349 aa13.05□□□□□ -0.32
USB1-213ENST00000566292 LOC102723971A0A1B0GUV8 181 aa13.04□□□□□ -0.32
USB1-213ENST00000566292 HBE1P02100 147 aa13.04□□□□□ -0.32
USB1-213ENST00000566292 METTL15P1P0C7V9 234 aa13.04□□□□□ -0.32
USB1-213ENST00000566292 PLP1P60201 277 aa13.04□□□□□ -0.32
USB1-213ENST00000566292 DLK1P80370 383 aa13.04□□□□□ -0.32
USB1-213ENST00000566292 C4orf46Q504U0 113 aa13.04□□□□□ -0.32
USB1-213ENST00000566292 RNF182Q8N6D2 247 aa13.04□□□□□ -0.32
USB1-213ENST00000566292 POM121L12Q8N7R1 296 aa13.04□□□□□ -0.32
USB1-213ENST00000566292 IGF2BP2-AS1Q96M15 143 aa13.04□□□□□ -0.32
USB1-213ENST00000566292 NIPSNAP3BQ9BS92 247 aa13.04□□□□□ -0.32
USB1-213ENST00000566292 HIGD1AQ9Y241 93 aa13.04□□□□□ -0.32
USB1-213ENST00000566292 YTHDF2Q9Y5A9 579 aaKnown RBP13.04□□□□□ -0.32
USB1-213ENST00000566292 TEX48A0A1B0GUV7 120 aa13.03□□□□□ -0.32
USB1-213ENST00000566292 HYPMO75409 117 aa13.03□□□□□ -0.32
USB1-213ENST00000566292 SCGB1D2O95969 90 aa13.03□□□□□ -0.32
USB1-213ENST00000566292 LINC00869P0C866 280 aa13.03□□□□□ -0.32
USB1-213ENST00000566292 P0DMU3 169 aa13.03□□□□□ -0.32
USB1-213ENST00000566292 FAM231AP0DMU4 169 aa13.03□□□□□ -0.32
USB1-213ENST00000566292 FAM231CP0DMU5 169 aa13.03□□□□□ -0.32
USB1-213ENST00000566292 IL7P13232 177 aa13.03□□□□□ -0.32
USB1-213ENST00000566292 S100A7P31151 101 aa13.03□□□□□ -0.32
USB1-213ENST00000566292 CNN1P51911 297 aaKnown RBP13.03□□□□□ -0.32
USB1-213ENST00000566292 RAP2BP61225 183 aa13.03□□□□□ -0.32
USB1-213ENST00000566292 FGL1Q08830 312 aa13.03□□□□□ -0.32
USB1-213ENST00000566292 IAH1Q2TAA2 248 aaPredicted RBP13.03□□□□□ -0.32
USB1-213ENST00000566292 OR11H7Q8NGC8 314 aa13.03□□□□□ -0.32
USB1-213ENST00000566292 UHRF2Q96PU4 802 aa13.03□□□□□ -0.32
USB1-213ENST00000566292 RCL1Q9Y2P8 373 aaKnown RBP13.03□□□□□ -0.32
USB1-213ENST00000566292 CENPXA8MT69 81 aa13.02□□□□□ -0.33
USB1-213ENST00000566292 CRXO43186 299 aaPredicted RBP13.02□□□□□ -0.33
USB1-213ENST00000566292 SELENOTP62341 195 aa13.02□□□□□ -0.33
USB1-213ENST00000566292 RRN3P1Q2M238 152 aa13.02□□□□□ -0.33
USB1-213ENST00000566292 ZBTB8BQ8NAP8 495 aaPredicted RBP13.02□□□□□ -0.33
USB1-213ENST00000566292 MITD1Q8WV92 249 aa13.02□□□□□ -0.33
USB1-213ENST00000566292 NPVFQ9HCQ7 196 aa13.02□□□□□ -0.33
USB1-213ENST00000566292 HERC2O95714 4834 aa13.02□□□□□ -0.33
USB1-213ENST00000566292 FNDC10F2Z333 226 aa13.01□□□□□ -0.33
USB1-213ENST00000566292 K7EPK0 472 aa13.01□□□□□ -0.33
USB1-213ENST00000566292 M0R2Z0 102 aa13.01□□□□□ -0.33
USB1-213ENST00000566292 DUSP14O95147 198 aaKnown RBP13.01□□□□□ -0.33
USB1-213ENST00000566292 PRM2P04554 102 aa13.01□□□□□ -0.33
USB1-213ENST00000566292 OR5G3P0C626 314 aa13.01□□□□□ -0.33
USB1-213ENST00000566292 RPL7P18124 248 aaKnown RBP13.01□□□□□ -0.33
USB1-213ENST00000566292 ARL16Q0P5N6 197 aa13.01□□□□□ -0.33
USB1-213ENST00000566292 OXA1LQ15070 435 aa13.01□□□□□ -0.33
USB1-213ENST00000566292 SPINK13Q1W4C9 94 aa13.01□□□□□ -0.33
USB1-213ENST00000566292 PATE2Q6UY27 113 aa13.01□□□□□ -0.33
USB1-213ENST00000566292 PLA2G10O15496 165 aa13□□□□□ -0.33
USB1-213ENST00000566292 TSC22D2O75157 780 aa13□□□□□ -0.33
USB1-213ENST00000566292 TAS2R30P59541 319 aa13□□□□□ -0.33
USB1-213ENST00000566292 SLC38A11Q08AI6 406 aa13□□□□□ -0.33
USB1-213ENST00000566292 TEPPQ6URK8 271 aa13□□□□□ -0.33
USB1-213ENST00000566292 ZNF738Q8NE65 137 aa13□□□□□ -0.33
USB1-213ENST00000566292 OR10P1Q8NGE3 313 aa13□□□□□ -0.33
USB1-213ENST00000566292 FAM210BQ96KR6 192 aa13□□□□□ -0.33
USB1-213ENST00000566292 TMEM208Q9BTX3 173 aa13□□□□□ -0.33
USB1-213ENST00000566292 ARL6Q9H0F7 186 aa13□□□□□ -0.33
USB1-213ENST00000566292 GSKIPQ9P0R6 139 aa13□□□□□ -0.33
USB1-213ENST00000566292 NACAE9PAV3 2078 aa13□□□□□ -0.33
USB1-213ENST00000566292 A0A087X0K7 114 aa12.99□□□□□ -0.33
USB1-213ENST00000566292 ZNF705GA8MUZ8 300 aaPredicted RBP12.99□□□□□ -0.33
USB1-213ENST00000566292 MRPS12O15235 138 aaKnown RBP12.99□□□□□ -0.33
USB1-213ENST00000566292 MBPP02686 304 aaPredicted RBP12.99□□□□□ -0.33
USB1-213ENST00000566292 HTN3P15516 51 aa12.99□□□□□ -0.33
USB1-213ENST00000566292 BAP18Q8IXM2 172 aa12.99□□□□□ -0.33
USB1-213ENST00000566292 C20orf85Q9H1P6 137 aa12.99□□□□□ -0.33
USB1-213ENST00000566292 ARV1Q9H2C2 271 aa12.99□□□□□ -0.33
USB1-213ENST00000566292 MGAT4CQ9UBM8 478 aa12.99□□□□□ -0.33
USB1-213ENST00000566292 C7orf66A4D0T2 115 aa12.98□□□□□ -0.33
USB1-213ENST00000566292 CCSO14618 274 aa12.98□□□□□ -0.33
USB1-213ENST00000566292 INSP01308 110 aa12.98□□□□□ -0.33
USB1-213ENST00000566292 PRB4P10163 310 aaPredicted RBP12.98□□□□□ -0.33
USB1-213ENST00000566292 CXCL3P19876 107 aa12.98□□□□□ -0.33
USB1-213ENST00000566292 M0R2N4 97 aa12.97□□□□□ -0.33
USB1-213ENST00000566292 DAD1P61803 113 aa12.97□□□□□ -0.33
USB1-213ENST00000566292 PSG3Q16557 428 aa12.97□□□□□ -0.33
USB1-213ENST00000566292 CNPY1Q3B7I2 92 aa12.97□□□□□ -0.33
USB1-213ENST00000566292 LINC00336Q6ZUF6 198 aa12.97□□□□□ -0.33
USB1-213ENST00000566292 OR8A1Q8NGG7 326 aa12.97□□□□□ -0.33
USB1-213ENST00000566292 TRAV12-2A0A075B6T6 113 aa12.96□□□□□ -0.33
USB1-213ENST00000566292 BOLA2-SMG1P6H3BVE0 249 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms