RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	HIST2H2BE	Q16778	126 aa		7.93	□□□□□ -1.14
TCF4-231	ENST00000566279	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	7.93	□□□□□ -1.14
TCF4-231	ENST00000566279	KCNIP4	Q6PIL6	250 aa		7.93	□□□□□ -1.14
TCF4-231	ENST00000566279	PRIMA1	Q86XR5	153 aa		7.93	□□□□□ -1.14
TCF4-231	ENST00000566279	HIST1H2BH	Q93079	126 aa		7.93	□□□□□ -1.14
TCF4-231	ENST00000566279	HIST1H2BN	Q99877	126 aa		7.93	□□□□□ -1.14
TCF4-231	ENST00000566279	HIST1H2BM	Q99879	126 aa		7.93	□□□□□ -1.14
TCF4-231	ENST00000566279	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	7.93	□□□□□ -1.14
TCF4-231	ENST00000566279	PEX7	O00628	323 aa		7.92	□□□□□ -1.14
TCF4-231	ENST00000566279	NDUFB8	O95169	186 aa		7.92	□□□□□ -1.14
TCF4-231	ENST00000566279	IGLV2-8	P01709	118 aa		7.92	□□□□□ -1.14
TCF4-231	ENST00000566279	TYMS	P04818	313 aa		7.92	□□□□□ -1.14
TCF4-231	ENST00000566279	MFAP4	P55083	255 aa		7.92	□□□□□ -1.14
TCF4-231	ENST00000566279	FAM3B	P58499	235 aa	Predicted RBP	7.92	□□□□□ -1.14
TCF4-231	ENST00000566279	OR5I1	Q13606	314 aa		7.92	□□□□□ -1.14
TCF4-231	ENST00000566279	SGMS2	Q8NHU3	365 aa		7.92	□□□□□ -1.14
TCF4-231	ENST00000566279	BLNK	Q8WV28	456 aa		7.92	□□□□□ -1.14
TCF4-231	ENST00000566279	FRZB	Q92765	325 aa		7.92	□□□□□ -1.14
TCF4-231	ENST00000566279	ESM1	Q9NQ30	184 aa		7.92	□□□□□ -1.14
TCF4-231	ENST00000566279	PPP5D1	E7EU14	171 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	GNG7	O60262	68 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	OR2J3	O76001	311 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	NBEAP1	P0C6P0	100 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	TRGC1	P0CF51	173 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	YPEL3	P61236	119 aa	Predicted RBP	7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	RAN	P62826	216 aa	Known RBP	7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	FOXL1	Q12952	345 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	ZNF491	Q8N8L2	437 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	LINC00479	Q96M42	142 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	SHANK2-AS3	Q9BTD1	123 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	C21orf62	Q9NYP8	219 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	TMEM14C	Q9P0S9	112 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	SETD2	Q9BYW2	2564 aa	Predicted RBP	7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	TRAV30	A0A087WSZ9	112 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	WI2-2373I1.2	A0A1W2PRP0	233 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	SH2D7	A6NKC9	451 aa	Predicted RBP	7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	ATP6V0E1	O15342	81 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	GCG	P01275	180 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	TAS2R60	P59551	318 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	GNG5	P63218	68 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	KLK9	Q2XQG4	91 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	C5orf56	Q8N8D9	126 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	FAM110D	Q8TAY7	271 aa	Predicted RBP	7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	PIFO	Q8TCI5	191 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	RNF125	Q96EQ8	232 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	THYN1	Q9P016	225 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279	KLK9	Q9UKQ9	250 aa		7.91	□□□□□ -1.14
TCF4-231	ENST00000566279		H3BRN7	92 aa		7.9	□□□□□ -1.14
TCF4-231	ENST00000566279		H3BTX0	84 aa		7.9	□□□□□ -1.14
TCF4-231	ENST00000566279	SLC17A3	O00476	420 aa		7.9	□□□□□ -1.14
TCF4-231	ENST00000566279	HOXA3	O43365	443 aa	Predicted RBP	7.9	□□□□□ -1.14
TCF4-231	ENST00000566279	IGHV3-23	P01764	117 aa		7.9	□□□□□ -1.14
TCF4-231	ENST00000566279	IL4	P05112	153 aa		7.9	□□□□□ -1.14
TCF4-231	ENST00000566279	CNN1	P51911	297 aa	Known RBP	7.9	□□□□□ -1.14
TCF4-231	ENST00000566279	NDUFA6	P56556	154 aa		7.9	□□□□□ -1.14
TCF4-231	ENST00000566279	ECSCR	Q19T08	205 aa		7.9	□□□□□ -1.14
TCF4-231	ENST00000566279		Q56UQ5	140 aa		7.9	□□□□□ -1.14
TCF4-231	ENST00000566279	UNQ5815/PRO19632	Q6UWF5	114 aa		7.9	□□□□□ -1.14
TCF4-231	ENST00000566279	TMEM219	Q86XT9	240 aa		7.9	□□□□□ -1.14
TCF4-231	ENST00000566279	FBXL7	Q9UJT9	491 aa		7.9	□□□□□ -1.14
TCF4-231	ENST00000566279		V9GYV3	84 aa		7.9	□□□□□ -1.14
TCF4-231	ENST00000566279	TRAV34	A0A0B4J273	112 aa		7.9	□□□□□ -1.15
TCF4-231	ENST00000566279	PGP	A6NDG6	321 aa		7.9	□□□□□ -1.15
TCF4-231	ENST00000566279	LINC01548	A6NM66	108 aa		7.9	□□□□□ -1.15
TCF4-231	ENST00000566279	IGHV4-59	P01825	116 aa		7.9	□□□□□ -1.15
TCF4-231	ENST00000566279	ERVFC1-1	P60608	527 aa		7.9	□□□□□ -1.15
TCF4-231	ENST00000566279	USF2	Q15853	346 aa	Predicted RBP	7.9	□□□□□ -1.15
TCF4-231	ENST00000566279	ANKRD39	Q53RE8	183 aa		7.9	□□□□□ -1.15
TCF4-231	ENST00000566279	C9orf139	Q6ZV77	190 aa		7.9	□□□□□ -1.15
TCF4-231	ENST00000566279	TMEM68	Q96MH6	324 aa		7.9	□□□□□ -1.15
TCF4-231	ENST00000566279	MEGF9	Q9H1U4	602 aa		7.9	□□□□□ -1.15
TCF4-231	ENST00000566279	ZNF586	Q9NXT0	402 aa		7.9	□□□□□ -1.15
TCF4-231	ENST00000566279	IL36B	Q9NZH7	164 aa		7.9	□□□□□ -1.15
TCF4-231	ENST00000566279	EPDR1	Q9UM22	224 aa		7.9	□□□□□ -1.15
TCF4-231	ENST00000566279	ISLR	O14498	428 aa		7.89	□□□□□ -1.15
TCF4-231	ENST00000566279	SLC25A5	P05141	298 aa	Known RBP	7.89	□□□□□ -1.15
TCF4-231	ENST00000566279	HIST1H1E	P10412	219 aa	Known RBP	7.89	□□□□□ -1.15
TCF4-231	ENST00000566279	HIST1H1B	P16401	226 aa	Known RBP	7.89	□□□□□ -1.15
TCF4-231	ENST00000566279	HOXA5	P20719	270 aa		7.89	□□□□□ -1.15
TCF4-231	ENST00000566279	FCGR2B	P31994	310 aa	Predicted RBP	7.89	□□□□□ -1.15
TCF4-231	ENST00000566279	TMEM183B	Q1AE95	376 aa		7.89	□□□□□ -1.15
TCF4-231	ENST00000566279	ACTL10	Q5JWF8	245 aa		7.89	□□□□□ -1.15
TCF4-231	ENST00000566279	TEX29	Q8N6K0	151 aa		7.89	□□□□□ -1.15
TCF4-231	ENST00000566279	RNASE7	Q9H1E1	156 aa	Known RBP	7.89	□□□□□ -1.15
TCF4-231	ENST00000566279		Q9H3A6	140 aa		7.89	□□□□□ -1.15
TCF4-231	ENST00000566279	OSTC	Q9NRP0	149 aa		7.89	□□□□□ -1.15
TCF4-231	ENST00000566279	MOB4	Q9Y3A3	225 aa		7.89	□□□□□ -1.15
TCF4-231	ENST00000566279	ZNF320	A2RRD8	509 aa		7.88	□□□□□ -1.15
TCF4-231	ENST00000566279	OR2T8	A6NH00	312 aa		7.88	□□□□□ -1.15
TCF4-231	ENST00000566279	DNAJC9-AS1	A6NH13	148 aa		7.88	□□□□□ -1.15
TCF4-231	ENST00000566279		G3V318	75 aa		7.88	□□□□□ -1.15
TCF4-231	ENST00000566279	AMY1A	P04745	511 aa		7.88	□□□□□ -1.15
TCF4-231	ENST00000566279	RPL15	P61313	204 aa	Known RBP	7.88	□□□□□ -1.15
TCF4-231	ENST00000566279	LY6E	Q16553	131 aa		7.88	□□□□□ -1.15
TCF4-231	ENST00000566279	C5orf17	Q8NAS9	161 aa		7.88	□□□□□ -1.15
TCF4-231	ENST00000566279	NHLRC2	Q8NBF2	726 aa		7.88	□□□□□ -1.15
TCF4-231	ENST00000566279	VN1R17P	Q8TDU5	208 aa		7.88	□□□□□ -1.15
TCF4-231	ENST00000566279	BTF3L4	Q96K17	158 aa		7.88	□□□□□ -1.15
TCF4-231	ENST00000566279	OTOR	Q9NRC9	128 aa		7.88	□□□□□ -1.15
TCF4-231	ENST00000566279	IFITM10	A6NMD0	228 aa		7.88	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms