RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 C4orf3Q8WVX3 66 aa14.65□□□□□ -0.06
CSPG4P13-201ENST00000565545 ZNF503Q96F45 646 aa14.65□□□□□ -0.06
CSPG4P13-201ENST00000565545 TREM1Q9NP99 234 aa14.65□□□□□ -0.06
CSPG4P13-201ENST00000565545 VAX2Q9UIW0 290 aa14.65□□□□□ -0.06
CSPG4P13-201ENST00000565545 RNF114Q9Y508 228 aa14.65□□□□□ -0.06
CSPG4P13-201ENST00000565545 IGHV3-35A0A0C4DH35 117 aa14.64□□□□□ -0.07
CSPG4P13-201ENST00000565545 I3L521 148 aa14.64□□□□□ -0.07
CSPG4P13-201ENST00000565545 TCTEX1D4Q5JR98 221 aa14.64□□□□□ -0.07
CSPG4P13-201ENST00000565545 BPIFA4PQ86YQ2 179 aa14.64□□□□□ -0.07
CSPG4P13-201ENST00000565545 OR5B12Q96R08 314 aa14.64□□□□□ -0.07
CSPG4P13-201ENST00000565545 NPPCP23582 126 aa14.63□□□□□ -0.07
CSPG4P13-201ENST00000565545 CRYBB3P26998 211 aa14.63□□□□□ -0.07
CSPG4P13-201ENST00000565545 UBE2L3P68036 154 aaKnown RBP14.63□□□□□ -0.07
CSPG4P13-201ENST00000565545 ICAM4Q14773 271 aa14.63□□□□□ -0.07
CSPG4P13-201ENST00000565545 C1orf194Q5T5A4 169 aa14.63□□□□□ -0.07
CSPG4P13-201ENST00000565545 TMEM190Q8WZ59 177 aa14.63□□□□□ -0.07
CSPG4P13-201ENST00000565545 RARRES2Q99969 163 aa14.63□□□□□ -0.07
CSPG4P13-201ENST00000565545 KRBOX1C9JBD0 128 aa14.62□□□□□ -0.07
CSPG4P13-201ENST00000565545 K7EMT4 169 aa14.62□□□□□ -0.07
CSPG4P13-201ENST00000565545 RPL7P18124 248 aaKnown RBP14.62□□□□□ -0.07
CSPG4P13-201ENST00000565545 ZP3P21754 424 aa14.62□□□□□ -0.07
CSPG4P13-201ENST00000565545 PROK1P58294 105 aa14.62□□□□□ -0.07
CSPG4P13-201ENST00000565545 SRSF3P84103 164 aaKnown RBP14.62□□□□□ -0.07
CSPG4P13-201ENST00000565545 RPEL1Q2QD12 228 aa14.62□□□□□ -0.07
CSPG4P13-201ENST00000565545 FXYD5Q96DB9 178 aa14.62□□□□□ -0.07
CSPG4P13-201ENST00000565545 NARS2Q96I59 477 aaKnown RBP14.62□□□□□ -0.07
CSPG4P13-201ENST00000565545 GPR82Q96P67 336 aa14.62□□□□□ -0.07
CSPG4P13-201ENST00000565545 C20orf24Q9BUV8 137 aa14.62□□□□□ -0.07
CSPG4P13-201ENST00000565545 NKX6-2Q9C056 277 aaPredicted RBP14.62□□□□□ -0.07
CSPG4P13-201ENST00000565545 U3KQE9 123 aa14.62□□□□□ -0.07
CSPG4P13-201ENST00000565545 TRRAPQ9Y4A5 3859 aa14.62□□□□□ -0.07
CSPG4P13-201ENST00000565545 A0A1W2PRE2 83 aa14.61□□□□□ -0.07
CSPG4P13-201ENST00000565545 PAGE4O60829 102 aa14.61□□□□□ -0.07
CSPG4P13-201ENST00000565545 HIST1H1EP10412 219 aaKnown RBP14.61□□□□□ -0.07
CSPG4P13-201ENST00000565545 GP9P14770 177 aa14.61□□□□□ -0.07
CSPG4P13-201ENST00000565545 MEF2BQ02080 365 aaPredicted RBP14.61□□□□□ -0.07
CSPG4P13-201ENST00000565545 RXFP4Q8TDU9 374 aa14.61□□□□□ -0.07
CSPG4P13-201ENST00000565545 A0A1W2PS18 150 aa14.6□□□□□ -0.07
CSPG4P13-201ENST00000565545 TMEM218A2RU14 115 aa14.6□□□□□ -0.07
CSPG4P13-201ENST00000565545 LGALS9O00182 355 aa14.6□□□□□ -0.07
CSPG4P13-201ENST00000565545 BUB3O43684 328 aa14.6□□□□□ -0.07
CSPG4P13-201ENST00000565545 OR10J4P0C629 311 aa14.6□□□□□ -0.07
CSPG4P13-201ENST00000565545 PYYP10082 97 aa14.6□□□□□ -0.07
CSPG4P13-201ENST00000565545 KHDC1LQ5JSQ8 128 aa14.6□□□□□ -0.07
CSPG4P13-201ENST00000565545 LEMD1Q68G75 181 aa14.6□□□□□ -0.07
CSPG4P13-201ENST00000565545 REC114Q7Z4M0 266 aa14.6□□□□□ -0.07
CSPG4P13-201ENST00000565545 OR4F17Q8NGA8 305 aa14.6□□□□□ -0.07
CSPG4P13-201ENST00000565545 OR4F4Q96R69 305 aa14.6□□□□□ -0.07
CSPG4P13-201ENST00000565545 SLC35B3Q9H1N7 401 aa14.6□□□□□ -0.07
CSPG4P13-201ENST00000565545 TMEM231Q9H6L2 316 aa14.6□□□□□ -0.07
CSPG4P13-201ENST00000565545 UFC1Q9Y3C8 167 aa14.6□□□□□ -0.07
CSPG4P13-201ENST00000565545 TSSC4Q9Y5U2 329 aaPredicted RBP14.6□□□□□ -0.07
CSPG4P13-201ENST00000565545 IGHV4OR15-8A0A075B7B6 117 aa14.59□□□□□ -0.07
CSPG4P13-201ENST00000565545 A0A087WW49 117 aa14.59□□□□□ -0.07
CSPG4P13-201ENST00000565545 FAM74A7A6NL05 159 aa14.59□□□□□ -0.07
CSPG4P13-201ENST00000565545 NBEAP1P0C6P0 100 aa14.59□□□□□ -0.07
CSPG4P13-201ENST00000565545 CD28P10747 220 aa14.59□□□□□ -0.07
CSPG4P13-201ENST00000565545 CST9LP1Q5W188 147 aa14.59□□□□□ -0.07
CSPG4P13-201ENST00000565545 UNQ9165/PRO28630Q6UXU0 137 aa14.59□□□□□ -0.07
CSPG4P13-201ENST00000565545 OR8I2Q8N0Y5 310 aa14.59□□□□□ -0.07
CSPG4P13-201ENST00000565545 DAZ1Q9NQZ3 744 aaKnown RBP14.59□□□□□ -0.07
CSPG4P13-201ENST00000565545 IGHV3OR16-8A0A075B7F1 116 aa14.58□□□□□ -0.08
CSPG4P13-201ENST00000565545 ZNF320A2RRD8 509 aa14.58□□□□□ -0.08
CSPG4P13-201ENST00000565545 C11orf94C9JXX5 98 aa14.58□□□□□ -0.08
CSPG4P13-201ENST00000565545 LINC01619G3V211 115 aa14.58□□□□□ -0.08
CSPG4P13-201ENST00000565545 MRPS12O15235 138 aaKnown RBP14.58□□□□□ -0.08
CSPG4P13-201ENST00000565545 PDE6DO43924 150 aa14.58□□□□□ -0.08
CSPG4P13-201ENST00000565545 SRP19P09132 144 aaKnown RBP14.58□□□□□ -0.08
CSPG4P13-201ENST00000565545 UBE2G2P60604 165 aa14.58□□□□□ -0.08
CSPG4P13-201ENST00000565545 KLHL30-AS1Q8NEE0 82 aa14.58□□□□□ -0.08
CSPG4P13-201ENST00000565545 DPF1Q92782 380 aa14.58□□□□□ -0.08
CSPG4P13-201ENST00000565545 GRAMD2BQ96HH9 432 aa14.58□□□□□ -0.08
CSPG4P13-201ENST00000565545 C9JQL5 133 aa14.57□□□□□ -0.08
CSPG4P13-201ENST00000565545 F6UZH7 168 aa14.57□□□□□ -0.08
CSPG4P13-201ENST00000565545 TMEM250H0YL14 139 aa14.57□□□□□ -0.08
CSPG4P13-201ENST00000565545 IGLC2P0DOY2 106 aa14.57□□□□□ -0.08
CSPG4P13-201ENST00000565545 HOXD3P31249 432 aaPredicted RBP14.57□□□□□ -0.08
CSPG4P13-201ENST00000565545 BMI1P35226 326 aa14.57□□□□□ -0.08
CSPG4P13-201ENST00000565545 CD81P60033 236 aa14.57□□□□□ -0.08
CSPG4P13-201ENST00000565545 C1QL4Q86Z23 238 aa14.57□□□□□ -0.08
CSPG4P13-201ENST00000565545 OR1N2Q8NGR9 330 aa14.57□□□□□ -0.08
CSPG4P13-201ENST00000565545 YTHDF2Q9Y5A9 579 aaKnown RBP14.57□□□□□ -0.08
CSPG4P13-201ENST00000565545 A8MWP6 167 aa14.56□□□□□ -0.08
CSPG4P13-201ENST00000565545 M0QZ24 198 aa14.56□□□□□ -0.08
CSPG4P13-201ENST00000565545 SFTA3P0C7M3 94 aa14.56□□□□□ -0.08
CSPG4P13-201ENST00000565545 GALR1P47211 349 aa14.56□□□□□ -0.08
CSPG4P13-201ENST00000565545 MEOX2P50222 304 aa14.56□□□□□ -0.08
CSPG4P13-201ENST00000565545 PDE6HQ13956 83 aa14.56□□□□□ -0.08
CSPG4P13-201ENST00000565545 C16orf54Q6UWD8 224 aa14.56□□□□□ -0.08
CSPG4P13-201ENST00000565545 OR11H1Q8NG94 326 aa14.56□□□□□ -0.08
CSPG4P13-201ENST00000565545 CITED2Q99967 270 aaPredicted RBP14.56□□□□□ -0.08
CSPG4P13-201ENST00000565545 TCEAL7Q9BRU2 100 aa14.56□□□□□ -0.08
CSPG4P13-201ENST00000565545 ELOVL1Q9BW60 279 aa14.56□□□□□ -0.08
CSPG4P13-201ENST00000565545 SEC11CQ9BY50 192 aa14.56□□□□□ -0.08
CSPG4P13-201ENST00000565545 IGHV7-4-1A0A0J9YVY3 117 aa14.55□□□□□ -0.08
CSPG4P13-201ENST00000565545 ZNF207O43670 478 aaKnown RBP14.55□□□□□ -0.08
CSPG4P13-201ENST00000565545 KLF5Q13887 457 aaPredicted RBP14.55□□□□□ -0.08
CSPG4P13-201ENST00000565545 C18orf65Q6ZTR6 163 aa14.55□□□□□ -0.08
CSPG4P13-201ENST00000565545 LYPD1Q8N2G4 141 aa14.55□□□□□ -0.08
CSPG4P13-201ENST00000565545 ZNF586Q9NXT0 402 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms