RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 CITED1Q99966 193 aa8.47□□□□□ -1.05
SF3B3-205ENST00000564899 SLC25A2Q9BXI2 301 aa8.47□□□□□ -1.05
SF3B3-205ENST00000564899 UFC1Q9Y3C8 167 aa8.47□□□□□ -1.05
SF3B3-205ENST00000564899 RYR2Q92736 4967 aa8.47□□□□□ -1.05
SF3B3-205ENST00000564899 TRAV1-1A0A0B4J248 108 aa8.46□□□□□ -1.06
SF3B3-205ENST00000564899 ZNF98A6NK75 572 aa8.46□□□□□ -1.06
SF3B3-205ENST00000564899 ADARB2-AS1A8MUL3 147 aa8.46□□□□□ -1.06
SF3B3-205ENST00000564899 CCL24O00175 119 aa8.46□□□□□ -1.06
SF3B3-205ENST00000564899 OR7C2O60412 319 aa8.46□□□□□ -1.06
SF3B3-205ENST00000564899 ARL14EPLP0DKL9 152 aa8.46□□□□□ -1.06
SF3B3-205ENST00000564899 NPPCP23582 126 aa8.46□□□□□ -1.06
SF3B3-205ENST00000564899 SYNJ2BPP57105 145 aa8.46□□□□□ -1.06
SF3B3-205ENST00000564899 LEMD1Q68G75 181 aa8.46□□□□□ -1.06
SF3B3-205ENST00000564899 NARS2Q96I59 477 aaKnown RBP8.46□□□□□ -1.06
SF3B3-205ENST00000564899 RAX2Q96IS3 184 aa8.46□□□□□ -1.06
SF3B3-205ENST00000564899 FAM167A-AS1Q96KT0 104 aa8.46□□□□□ -1.06
SF3B3-205ENST00000564899 DAZ1Q9NQZ3 744 aaKnown RBP8.46□□□□□ -1.06
SF3B3-205ENST00000564899 PFDN2Q9UHV9 154 aa8.46□□□□□ -1.06
SF3B3-205ENST00000564899 RNF24Q9Y225 148 aa8.46□□□□□ -1.06
SF3B3-205ENST00000564899 NOTCH3Q9UM47 2321 aa8.45□□□□□ -1.06
SF3B3-205ENST00000564899 IGHV3-49A0A0A0MS15 119 aa8.45□□□□□ -1.06
SF3B3-205ENST00000564899 IGHV3-66A0A0C4DH42 116 aa8.45□□□□□ -1.06
SF3B3-205ENST00000564899 K7EMT4 169 aa8.45□□□□□ -1.06
SF3B3-205ENST00000564899 LGALS9O00182 355 aa8.45□□□□□ -1.06
SF3B3-205ENST00000564899 CXorf1O96002 111 aa8.45□□□□□ -1.06
SF3B3-205ENST00000564899 CRYBB3P26998 211 aa8.45□□□□□ -1.06
SF3B3-205ENST00000564899 FHL3Q13643 280 aa8.45□□□□□ -1.06
SF3B3-205ENST00000564899 KLF5Q13887 457 aaPredicted RBP8.45□□□□□ -1.06
SF3B3-205ENST00000564899 TM4SF20Q53R12 229 aa8.45□□□□□ -1.06
SF3B3-205ENST00000564899 IL34Q6ZMJ4 242 aa8.45□□□□□ -1.06
SF3B3-205ENST00000564899 PQLC2Q6ZP29 291 aa8.45□□□□□ -1.06
SF3B3-205ENST00000564899 STXBP6Q8NFX7 210 aa8.45□□□□□ -1.06
SF3B3-205ENST00000564899 LYPD6BQ8NI32 183 aa8.45□□□□□ -1.06
SF3B3-205ENST00000564899 PAXXQ9BUH6 204 aa8.45□□□□□ -1.06
SF3B3-205ENST00000564899 BIRC6Q9NR09 4857 aa8.45□□□□□ -1.06
SF3B3-205ENST00000564899 IGHV3OR16-13A0A075B7E8 117 aa8.44□□□□□ -1.06
SF3B3-205ENST00000564899 IGHV3-74A0A0B4J1X5 117 aa8.44□□□□□ -1.06
SF3B3-205ENST00000564899 IGHV7-4-1A0A0J9YVY3 117 aa8.44□□□□□ -1.06
SF3B3-205ENST00000564899 A0A1W2PS18 150 aa8.44□□□□□ -1.06
SF3B3-205ENST00000564899 TMEM213A2RRL7 107 aa8.44□□□□□ -1.06
SF3B3-205ENST00000564899 A8MWP6 167 aa8.44□□□□□ -1.06
SF3B3-205ENST00000564899 BUB3O43684 328 aa8.44□□□□□ -1.06
SF3B3-205ENST00000564899 APOHP02749 345 aaPredicted RBP8.44□□□□□ -1.06
SF3B3-205ENST00000564899 GCHFRP30047 84 aa8.44□□□□□ -1.06
SF3B3-205ENST00000564899 UBE2L3P68036 154 aaKnown RBP8.44□□□□□ -1.06
SF3B3-205ENST00000564899 CCL20P78556 96 aa8.44□□□□□ -1.06
SF3B3-205ENST00000564899 DLX4Q92988 240 aaPredicted RBP8.44□□□□□ -1.06
SF3B3-205ENST00000564899 ZNF503Q96F45 646 aa8.44□□□□□ -1.06
SF3B3-205ENST00000564899 OR51M1Q9H341 326 aa8.44□□□□□ -1.06
SF3B3-205ENST00000564899 TMPRSS5Q9H3S3 457 aa8.44□□□□□ -1.06
SF3B3-205ENST00000564899 U3KQE9 123 aa8.44□□□□□ -1.06
SF3B3-205ENST00000564899 G3V4G9 280 aa8.43□□□□□ -1.06
SF3B3-205ENST00000564899 OR10J4P0C629 311 aa8.43□□□□□ -1.06
SF3B3-205ENST00000564899 PYYP10082 97 aa8.43□□□□□ -1.06
SF3B3-205ENST00000564899 GP9P14770 177 aa8.43□□□□□ -1.06
SF3B3-205ENST00000564899 RPL7P18124 248 aaKnown RBP8.43□□□□□ -1.06
SF3B3-205ENST00000564899 BMI1P35226 326 aa8.43□□□□□ -1.06
SF3B3-205ENST00000564899 MYCNOSP40205 109 aa8.43□□□□□ -1.06
SF3B3-205ENST00000564899 C1orf194Q5T5A4 169 aa8.43□□□□□ -1.06
SF3B3-205ENST00000564899 BPIFA4PQ86YQ2 179 aa8.43□□□□□ -1.06
SF3B3-205ENST00000564899 OR8I2Q8N0Y5 310 aa8.43□□□□□ -1.06
SF3B3-205ENST00000564899 GRAMD2BQ96HH9 432 aa8.43□□□□□ -1.06
SF3B3-205ENST00000564899 TMEM167BQ9NRX6 74 aa8.43□□□□□ -1.06
SF3B3-205ENST00000564899 TMEM14CQ9P0S9 112 aa8.43□□□□□ -1.06
SF3B3-205ENST00000564899 GNG13Q9P2W3 67 aa8.43□□□□□ -1.06
SF3B3-205ENST00000564899 PEMTQ9UBM1 199 aa8.43□□□□□ -1.06
SF3B3-205ENST00000564899 SMPXQ9UHP9 88 aa8.43□□□□□ -1.06
SF3B3-205ENST00000564899 LINC00862A6NCI5 91 aa8.42□□□□□ -1.06
SF3B3-205ENST00000564899 C2orf70A6NJV1 201 aa8.42□□□□□ -1.06
SF3B3-205ENST00000564899 M0QZ24 198 aa8.42□□□□□ -1.06
SF3B3-205ENST00000564899 IFNA1P01562 189 aa8.42□□□□□ -1.06
SF3B3-205ENST00000564899 EDN2P20800 178 aa8.42□□□□□ -1.06
SF3B3-205ENST00000564899 PSMB3P49720 205 aa8.42□□□□□ -1.06
SF3B3-205ENST00000564899 PPT1P50897 306 aa8.42□□□□□ -1.06
SF3B3-205ENST00000564899 C16orf54Q6UWD8 224 aa8.42□□□□□ -1.06
SF3B3-205ENST00000564899 COMMD7Q86VX2 200 aa8.42□□□□□ -1.06
SF3B3-205ENST00000564899 OR4F17Q8NGA8 305 aa8.42□□□□□ -1.06
SF3B3-205ENST00000564899 OR9G4Q8NGQ1 327 aa8.42□□□□□ -1.06
SF3B3-205ENST00000564899 MARC2Q969Z3 335 aa8.42□□□□□ -1.06
SF3B3-205ENST00000564899 FXYD5Q96DB9 178 aa8.42□□□□□ -1.06
SF3B3-205ENST00000564899 GPR82Q96P67 336 aa8.42□□□□□ -1.06
SF3B3-205ENST00000564899 OR4F4Q96R69 305 aa8.42□□□□□ -1.06
SF3B3-205ENST00000564899 RHPN1-AS1Q9BWJ2 59 aa8.42□□□□□ -1.06
SF3B3-205ENST00000564899 TMEM231Q9H6L2 316 aa8.42□□□□□ -1.06
SF3B3-205ENST00000564899 MED9Q9NWA0 146 aa8.42□□□□□ -1.06
SF3B3-205ENST00000564899 OVOL1O14753 267 aa8.41□□□□□ -1.06
SF3B3-205ENST00000564899 CHEK1O14757 476 aa8.41□□□□□ -1.06
SF3B3-205ENST00000564899 MRPS12O15235 138 aaKnown RBP8.41□□□□□ -1.06
SF3B3-205ENST00000564899 PF4P02776 101 aa8.41□□□□□ -1.06
SF3B3-205ENST00000564899 SNRPCP09234 159 aaKnown RBP8.41□□□□□ -1.06
SF3B3-205ENST00000564899 HIST1H1EP10412 219 aaKnown RBP8.41□□□□□ -1.06
SF3B3-205ENST00000564899 ATF4P18848 351 aaPredicted RBP8.41□□□□□ -1.06
SF3B3-205ENST00000564899 GALR1P47211 349 aa8.41□□□□□ -1.06
SF3B3-205ENST00000564899 HAGHQ16775 308 aa8.41□□□□□ -1.06
SF3B3-205ENST00000564899 BEAN1Q3B7T3 259 aa8.41□□□□□ -1.06
SF3B3-205ENST00000564899 TOR2AQ5JU69 321 aa8.41□□□□□ -1.06
SF3B3-205ENST00000564899 GLMPQ8WWB7 406 aa8.41□□□□□ -1.06
SF3B3-205ENST00000564899 ELOVL1Q9BW60 279 aa8.41□□□□□ -1.06
SF3B3-205ENST00000564899 MANBALQ9NQG1 85 aa8.41□□□□□ -1.06
SF3B3-205ENST00000564899 H3BQ15 152 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms