RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 TRRAPQ9Y4A5 3859 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 RNF222A6NCQ9 220 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 M0R3E3 92 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 SCGB1C2P0DMR2 95 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 PSG2P11465 335 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 CFHR2P36980 270 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 ATP5EP56381 51 aaPredicted RBP2.76□□□□□ -1.97
CHD9-213ENST00000564845 TM4SF20Q53R12 229 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 LRRC29Q8WV35 223 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 PCNX2A6NKB5 2137 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 B4DSR2 109 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 PSG7Q13046 419 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 FBXL15Q9H469 300 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 PLA2G2EQ9NZK7 142 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 TRAV21A0A0B4J279 112 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 MGST1P10620 155 aaKnown RBP2.76□□□□□ -1.97
CHD9-213ENST00000564845 RPL39P5Q59GN2 51 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 RNF182Q8N6D2 247 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 RNASE6Q93091 150 aaKnown RBP2.76□□□□□ -1.97
CHD9-213ENST00000564845 CYSLTR1Q9Y271 337 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 IGHV3-23P01764 117 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 ZNF25P17030 456 aaPredicted RBP2.76□□□□□ -1.97
CHD9-213ENST00000564845 GCSAMLQ5JQS6 135 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 CFAP161Q6P656 301 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 BEX4Q9NWD9 120 aaPredicted RBP2.76□□□□□ -1.97
CHD9-213ENST00000564845 ZNF580Q9UK33 172 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 NDUFB1O75438 58 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 LGALS1P09382 135 aaKnown RBP2.76□□□□□ -1.97
CHD9-213ENST00000564845 TNFRSF9Q07011 255 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 TMEM158Q8WZ71 300 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 KAAG1Q9UBP8 84 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 TPRP12270 2363 aaKnown RBP2.76□□□□□ -1.97
CHD9-213ENST00000564845 CADP27708 2225 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 A0A0U1RQK1 487 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 RNASEKQ6P5S7 137 aaKnown RBP2.76□□□□□ -1.97
CHD9-213ENST00000564845 GAPTQ8N292 157 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 RITA1Q96K30 269 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 ST20Q9HBF5 79 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 DAZ1Q9NQZ3 744 aaKnown RBP2.76□□□□□ -1.97
CHD9-213ENST00000564845 LINC00527Q9UJ94 153 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 PKDREJQ9NTG1 2253 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 IGKV1-6A0A0C4DH72 117 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 ARG1P05089 322 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 LMO1P25800 156 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 PLA2G2CQ5R387 149 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 Q71RC1 249 aaPredicted RBP2.76□□□□□ -1.97
CHD9-213ENST00000564845 TEX45Q8NA69 505 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 TLNRD1Q9H1K6 362 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 KIR2DL5BA0A0G2JN68 375 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 KIR2DL5BA0A0G2JPC4 375 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 SPANXN5Q5MJ07 72 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 CYP2G1PQ6ZSU1 146 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 KIR2DL5AQ8N109 375 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 DUX5Q96PT3 197 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 C1orf43Q9BWL3 253 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 TRAV3A0A0B4J244 114 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 DANCRP0C864 163 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 TMEM11P17152 192 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 LYPD2Q6UXB3 125 aa2.76□□□□□ -1.97
CHD9-213ENST00000564845 TRBV5-7A0A0A0MS05 114 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.75□□□□□ -1.97
CHD9-213ENST00000564845 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.75□□□□□ -1.97
CHD9-213ENST00000564845 RPL27AP46776 148 aaKnown RBP2.75□□□□□ -1.97
CHD9-213ENST00000564845 RPL32P62910 135 aaKnown RBP2.75□□□□□ -1.97
CHD9-213ENST00000564845 TRAV25A0A0B4J276 109 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 AMY1AP04745 511 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 TMEM141Q96I45 108 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 AGMATQ9BSE5 352 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 OSTCQ9NRP0 149 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 UBE2CO00762 179 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 ASCL3Q9NQ33 180 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 SPINK4O60575 86 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 LINC00869P0C866 280 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 IGFBP3P17936 291 aaPredicted RBP2.75□□□□□ -1.97
CHD9-213ENST00000564845 CKS2P33552 79 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 QRFPP83859 136 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 ZFP2Q6ZN57 461 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 TMEM167AQ8TBQ9 72 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 MBD3L1Q8WWY6 194 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 OTX1P32242 354 aaPredicted RBP2.75□□□□□ -1.97
CHD9-213ENST00000564845 EWSR1Q01844 656 aaKnown RBP eCLIP2.75□□□□□ -1.974e-8■■■□□ 17.8
CHD9-213ENST00000564845 KLF14Q8TD94 323 aaPredicted RBP2.75□□□□□ -1.97
CHD9-213ENST00000564845 LINC00479Q96M42 142 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 PRSS8Q16651 343 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 CCL13Q99616 98 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 FAM103A1Q9BTL3 118 aaKnown RBP2.75□□□□□ -1.97
CHD9-213ENST00000564845 RNF126Q9BV68 326 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 INS-IGF2F8WCM5 200 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 NBR2O15453 112 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 OR2H2O95918 312 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 INSP01308 110 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 LGALS3P17931 250 aaKnown RBP2.75□□□□□ -1.97
CHD9-213ENST00000564845 CDKN1AP38936 164 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 NBL1P41271 181 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 CCL20P78556 96 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 BVES-AS1Q5T3Y7 98 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 OR13A1Q8NGR1 328 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 VGLL1Q99990 258 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 SPATA25Q9BR10 227 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 A4D1N5 150 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms