RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 TSPAN32Q96QS1 320 aa2.7□□□□□ -1.98
CDH1-207ENST00000564745 SIGMAR1Q99720 223 aa2.7□□□□□ -1.98
CDH1-207ENST00000564745 PSMG3Q9BT73 122 aaPredicted RBP2.7□□□□□ -1.98
CDH1-207ENST00000564745 NAA60Q9H7X0 242 aa2.7□□□□□ -1.98
CDH1-207ENST00000564745 C21orf62Q9NYP8 219 aa2.7□□□□□ -1.98
CDH1-207ENST00000564745 R4GMQ9 66 aa2.7□□□□□ -1.98
CDH1-207ENST00000564745 BRWD3Q6RI45 1802 aa2.7□□□□□ -1.98
CDH1-207ENST00000564745 C2orf16Q68DN1 1984 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 IGHV3-49A0A0A0MS15 119 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 LOC107986453A0A1B0GWG9 222 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 IGSF23A1L1A6 192 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 TMEM189A5PLL7 270 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 FAM24AA6NFZ4 105 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 CEBPZOSA8MTT3 80 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 ZNF737O75373 536 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 S1PR2O95136 353 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 IFNA5P01569 189 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 GYPAP02724 150 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 MT-ND6P03923 174 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 CMPK1P30085 196 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 ZNF93P35789 620 aaPredicted RBP2.69□□□□□ -1.98
CDH1-207ENST00000564745 REG1BP48304 166 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 PSMB3P49720 205 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 RHOBP62745 196 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 FMODQ06828 376 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 SPIN3Q5JUX0 258 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 AMMECR1LQ6DCA0 310 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 MRPL54Q6P161 138 aaKnown RBP2.69□□□□□ -1.98
CDH1-207ENST00000564745 LYZL2Q7Z4W2 148 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 BAGE3Q86Y29 109 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 BAGE2Q86Y30 109 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 LRRC25Q8N386 305 aaPredicted RBP2.69□□□□□ -1.98
CDH1-207ENST00000564745 OR10P1Q8NGE3 313 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 OR5D14Q8NGL3 314 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 OR5C1Q8NGR4 320 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 OR2Y1Q8NGV0 311 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 SLC25A40Q8TBP6 338 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 OR5P3Q8WZ94 311 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 LINC00477Q96M19 166 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 SLC22A13Q9Y226 551 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 PHIPQ8WWQ0 1821 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 KIAA1671Q9BY89 1806 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 SCN1AP35498 2009 aa2.69□□□□□ -1.98
CDH1-207ENST00000564745 CCL15-CCL14A0A0B4J2E2 113 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 CENPVL3A0A0U1RRI6 287 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 LOC102725191A0A1B0GVB3 256 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 OR11H12B2RN74 326 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 SDCBPO00560 298 aaPredicted RBP2.68□□□□□ -1.98
CDH1-207ENST00000564745 PDE6DO43924 150 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 TNFP01375 233 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 HLA-DRB1P01911 266 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 ASAH2BP0C7U1 165 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 STAG3L2P0CL84 134 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 ZNF728P0DKX0 622 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 PTNP21246 168 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 CCR2P41597 374 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 GUCA1AP43080 201 aaPredicted RBP2.68□□□□□ -1.98
CDH1-207ENST00000564745 DYNLT3P51808 116 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 CRYBA4P53673 196 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 PIGPP57054 158 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 KRTDAPP60985 99 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 SEC11AP67812 179 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 PSG9Q00887 426 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 RPL18AQ02543 176 aaKnown RBP2.68□□□□□ -1.98
CDH1-207ENST00000564745 PRDX1Q06830 199 aaKnown RBP2.68□□□□□ -1.98
CDH1-207ENST00000564745 TMEM267Q0VDI3 215 aaPredicted RBP2.68□□□□□ -1.98
CDH1-207ENST00000564745 PDGFRLQ15198 375 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 ZNF141Q15928 474 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 CCL15Q16663 113 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 TMEM249Q2WGJ8 235 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 BVES-AS1Q5T3Y7 98 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 FAM78BQ5VT40 261 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 GLIPR1L1Q6UWM5 242 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 S100A7AQ86SG5 101 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 SELENOHQ8IZQ5 122 aaKnown RBP2.68□□□□□ -1.98
CDH1-207ENST00000564745 C5orf17Q8NAS9 161 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 OR11H1Q8NG94 326 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 OR5A1Q8NGJ0 315 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 OR11H2Q8NH07 326 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 SGMS2Q8NHU3 365 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 MRPL30Q8TCC3 161 aaKnown RBP2.68□□□□□ -1.98
CDH1-207ENST00000564745 SCGB1C1Q8TD33 95 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 ZNF721Q8TF20 911 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 RTN4IP1Q8WWV3 396 aaPredicted RBP2.68□□□□□ -1.98
CDH1-207ENST00000564745 AMELYQ99218 206 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 TXNDC17Q9BRA2 123 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 GNB1LQ9BYB4 327 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 AICDAQ9GZX7 198 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 ST20Q9HBF5 79 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 ZNF286AQ9HBT8 521 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 RPRMQ9NS64 109 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 FAM206AQ9NX38 181 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 TAC3Q9UHF0 121 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 KLF12Q9Y4X4 402 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 TIMM9Q9Y5J7 89 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 S4R3C0 116 aa2.68□□□□□ -1.98
CDH1-207ENST00000564745 COL27A1Q8IZC6 1860 aaPredicted RBP2.68□□□□□ -1.98
CDH1-207ENST00000564745 IGKV1D-42A0A075B6H8 117 aa2.67□□□□□ -1.98
CDH1-207ENST00000564745 TRAV40A0A0B4J280 105 aa2.67□□□□□ -1.98
CDH1-207ENST00000564745 A0A1W2PRF3 423 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms