RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 ATP6V1FQ16864 119 aa7.31□□□□□ -1.24
CDH1-206ENST00000564676 PXDC1Q5TGL8 231 aa7.31□□□□□ -1.24
CDH1-206ENST00000564676 NBEAL2Q6ZNJ1 2754 aa7.31□□□□□ -1.24
CDH1-206ENST00000564676 RNF183Q96D59 192 aa7.31□□□□□ -1.24
CDH1-206ENST00000564676 GPR82Q96P67 336 aa7.31□□□□□ -1.24
CDH1-206ENST00000564676 MGST2Q99735 147 aa7.31□□□□□ -1.24
CDH1-206ENST00000564676 SHANK2-AS3Q9BTD1 123 aa7.31□□□□□ -1.24
CDH1-206ENST00000564676 SCRT1Q9BWW7 348 aa7.31□□□□□ -1.24
CDH1-206ENST00000564676 OR5AC2Q9NZP5 309 aa7.31□□□□□ -1.24
CDH1-206ENST00000564676 ALG5Q9Y673 324 aa7.31□□□□□ -1.24
CDH1-206ENST00000564676 TENM3Q9P273 2699 aa7.3□□□□□ -1.24
CDH1-206ENST00000564676 H0YIZ8 118 aa7.3□□□□□ -1.24
CDH1-206ENST00000564676 COX7A2P2O60397 106 aa7.3□□□□□ -1.24
CDH1-206ENST00000564676 RPL7P18124 248 aaKnown RBP7.3□□□□□ -1.24
CDH1-206ENST00000564676 ATF4P18848 351 aaPredicted RBP7.3□□□□□ -1.24
CDH1-206ENST00000564676 PSMB3P49720 205 aa7.3□□□□□ -1.24
CDH1-206ENST00000564676 MEOX2P50222 304 aa7.3□□□□□ -1.24
CDH1-206ENST00000564676 BAXQ07812 192 aa7.3□□□□□ -1.24
CDH1-206ENST00000564676 FGL1Q08830 312 aa7.3□□□□□ -1.24
CDH1-206ENST00000564676 SAMD13Q5VXD3 122 aa7.3□□□□□ -1.24
CDH1-206ENST00000564676 Q6ZRG5 221 aa7.3□□□□□ -1.24
CDH1-206ENST00000564676 TRPT1Q86TN4 253 aaKnown RBP7.3□□□□□ -1.24
CDH1-206ENST00000564676 PPP1R1CQ8WVI7 109 aa7.3□□□□□ -1.24
CDH1-206ENST00000564676 C16orf92Q96LL3 132 aa7.3□□□□□ -1.24
CDH1-206ENST00000564676 UHRF2Q96PU4 802 aa7.3□□□□□ -1.24
CDH1-206ENST00000564676 ARV1Q9H2C2 271 aa7.3□□□□□ -1.24
CDH1-206ENST00000564676 RNF24Q9Y225 148 aa7.3□□□□□ -1.24
CDH1-206ENST00000564676 WDR83OSQ9Y284 106 aa7.3□□□□□ -1.24
CDH1-206ENST00000564676 STAB2Q8WWQ8 2551 aa7.3□□□□□ -1.24
CDH1-206ENST00000564676 ISLRO14498 428 aa7.29□□□□□ -1.24
CDH1-206ENST00000564676 PET100P0DJ07 73 aa7.29□□□□□ -1.24
CDH1-206ENST00000564676 SPP1P10451 314 aa7.29□□□□□ -1.24
CDH1-206ENST00000564676 FGF7P21781 194 aa7.29□□□□□ -1.24
CDH1-206ENST00000564676 EWSR1Q01844 656 aaKnown RBP eCLIP7.29□□□□□ -1.24
CDH1-206ENST00000564676 NHLH2Q02577 135 aa7.29□□□□□ -1.24
CDH1-206ENST00000564676 VWC2Q2TAL6 325 aa7.29□□□□□ -1.24
CDH1-206ENST00000564676 MIC13Q5XKP0 118 aa7.29□□□□□ -1.24
CDH1-206ENST00000564676 ZFAND6Q6FIF0 208 aa7.29□□□□□ -1.24
CDH1-206ENST00000564676 MORN3Q6PF18 240 aaPredicted RBP7.29□□□□□ -1.24
CDH1-206ENST00000564676 PATE2Q6UY27 113 aa7.29□□□□□ -1.24
CDH1-206ENST00000564676 OR5C1Q8NGR4 320 aa7.29□□□□□ -1.24
CDH1-206ENST00000564676 MED28Q9H204 178 aa7.29□□□□□ -1.24
CDH1-206ENST00000564676 ELOA3CA0A087WX78 387 aaPredicted RBP7.28□□□□□ -1.24
CDH1-206ENST00000564676 H3BMM0 161 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 SOCS3O14543 225 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 MPC2O95563 127 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 DEFB1P60022 68 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 B2MP61769 119 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 NUTF2P61970 127 aaKnown RBP7.28□□□□□ -1.24
CDH1-206ENST00000564676 CLINT1Q14677 625 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 TMEM41BQ5BJD5 291 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 C10orf113Q5VZT2 155 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 EBLN2Q6P2I7 272 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 LINC00305Q7Z4B0 112 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 OR1L4Q8NGR5 311 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 OR11H2Q8NH07 326 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 IL17DQ8TAD2 202 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 GATAD1Q8WUU5 269 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 RARRES2Q99969 163 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 RNF126Q9BV68 326 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 DNAJC4Q9NNZ3 241 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 SLC39A9Q9NUM3 307 aa7.28□□□□□ -1.24
CDH1-206ENST00000564676 A0A0J9YWU9 116 aa7.27□□□□□ -1.25
CDH1-206ENST00000564676 MPDU1O75352 247 aa7.27□□□□□ -1.25
CDH1-206ENST00000564676 IGKV3-20P01619 116 aa7.27□□□□□ -1.25
CDH1-206ENST00000564676 HLA-DRB4P13762 266 aa7.27□□□□□ -1.25
CDH1-206ENST00000564676 RPL29P47914 159 aaKnown RBP7.27□□□□□ -1.25
CDH1-206ENST00000564676 OPCMLQ14982 345 aa7.27□□□□□ -1.25
CDH1-206ENST00000564676 FCN2Q15485 313 aa7.27□□□□□ -1.25
CDH1-206ENST00000564676 RGS21Q2M5E4 152 aa7.27□□□□□ -1.25
CDH1-206ENST00000564676 CASC10Q5T4H9 136 aa7.27□□□□□ -1.25
CDH1-206ENST00000564676 FOXI2Q6ZQN5 318 aa7.27□□□□□ -1.25
CDH1-206ENST00000564676 THAP6Q8TBB0 222 aa7.27□□□□□ -1.25
CDH1-206ENST00000564676 LRRC20Q8TCA0 184 aa7.27□□□□□ -1.25
CDH1-206ENST00000564676 TMEM37Q8WXS4 190 aa7.27□□□□□ -1.25
CDH1-206ENST00000564676 C20orf173Q96LM9 149 aa7.27□□□□□ -1.25
CDH1-206ENST00000564676 RPRMQ9NS64 109 aa7.27□□□□□ -1.25
CDH1-206ENST00000564676 MBD2Q9UBB5 411 aa7.27□□□□□ -1.25
CDH1-206ENST00000564676 PXMP4Q9Y6I8 212 aa7.27□□□□□ -1.25
CDH1-206ENST00000564676 HLA-DRB4X5D2U9 266 aa7.27□□□□□ -1.25
CDH1-206ENST00000564676 DNAH7Q8WXX0 4024 aa7.27□□□□□ -1.25
CDH1-206ENST00000564676 GIG44P09565 113 aaPredicted RBP7.26□□□□□ -1.25
CDH1-206ENST00000564676 CXCL3P19876 107 aa7.26□□□□□ -1.25
CDH1-206ENST00000564676 C4BPBP20851 252 aa7.26□□□□□ -1.25
CDH1-206ENST00000564676 RPL12P30050 165 aaKnown RBP7.26□□□□□ -1.25
CDH1-206ENST00000564676 GDF5OSQ5U4N7 250 aa7.26□□□□□ -1.25
CDH1-206ENST00000564676 SPATA31B1PQ5VZV4 182 aa7.26□□□□□ -1.25
CDH1-206ENST00000564676 IGFL4Q6B9Z1 124 aa7.26□□□□□ -1.25
CDH1-206ENST00000564676 BPIFA4PQ86YQ2 179 aa7.26□□□□□ -1.25
CDH1-206ENST00000564676 ZNF709Q8N972 641 aa7.26□□□□□ -1.25
CDH1-206ENST00000564676 OR4B1Q8NGF8 309 aa7.26□□□□□ -1.25
CDH1-206ENST00000564676 CHAC2Q8WUX2 184 aa7.26□□□□□ -1.25
CDH1-206ENST00000564676 C17orf77Q96MU5 243 aa7.26□□□□□ -1.25
CDH1-206ENST00000564676 PFDN5Q99471 154 aa7.26□□□□□ -1.25
CDH1-206ENST00000564676 NPCDR1Q9BY65 106 aa7.26□□□□□ -1.25
CDH1-206ENST00000564676 SAV1Q9H4B6 383 aaPredicted RBP7.26□□□□□ -1.25
CDH1-206ENST00000564676 CLEC5AQ9NY25 188 aa7.26□□□□□ -1.25
CDH1-206ENST00000564676 HSPB11Q9Y547 144 aa7.26□□□□□ -1.25
CDH1-206ENST00000564676 A0A087X0K7 114 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms