RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 UHRF2Q96PU4 802 aa12.73□□□□□ -0.37
USB1-209ENST00000564387 ARV1Q9H2C2 271 aa12.73□□□□□ -0.37
USB1-209ENST00000564387 MBD2Q9UBB5 411 aa12.73□□□□□ -0.37
USB1-209ENST00000564387 RNF24Q9Y225 148 aa12.73□□□□□ -0.37
USB1-209ENST00000564387 TP53TG1Q9Y2A0 90 aa12.73□□□□□ -0.37
USB1-209ENST00000564387 ISLRO14498 428 aa12.72□□□□□ -0.37
USB1-209ENST00000564387 MRPS12O15235 138 aaKnown RBP12.72□□□□□ -0.37
USB1-209ENST00000564387 OR5G3P0C626 314 aa12.72□□□□□ -0.37
USB1-209ENST00000564387 PSMB3P49720 205 aa12.72□□□□□ -0.37
USB1-209ENST00000564387 MEOX2P50222 304 aa12.72□□□□□ -0.37
USB1-209ENST00000564387 MIC13Q5XKP0 118 aa12.72□□□□□ -0.37
USB1-209ENST00000564387 TRPT1Q86TN4 253 aaKnown RBP12.72□□□□□ -0.37
USB1-209ENST00000564387 OVOL2Q9BRP0 275 aa12.72□□□□□ -0.37
USB1-209ENST00000564387 CSTL1Q9H114 145 aa12.72□□□□□ -0.37
USB1-209ENST00000564387 SLC25A22Q9H936 323 aa12.72□□□□□ -0.37
USB1-209ENST00000564387 EDA2RQ9HAV5 297 aa12.72□□□□□ -0.37
USB1-209ENST00000564387 HSPB11Q9Y547 144 aa12.72□□□□□ -0.37
USB1-209ENST00000564387 GIPP09681 153 aaPredicted RBP12.71□□□□□ -0.37
USB1-209ENST00000564387 RPL35AP18077 110 aaKnown RBP12.71□□□□□ -0.37
USB1-209ENST00000564387 RPL7P18124 248 aaKnown RBP12.71□□□□□ -0.37
USB1-209ENST00000564387 FGF7P21781 194 aa12.71□□□□□ -0.37
USB1-209ENST00000564387 RPL12P30050 165 aaKnown RBP12.71□□□□□ -0.37
USB1-209ENST00000564387 PSMG4Q5JS54 123 aa12.71□□□□□ -0.37
USB1-209ENST00000564387 RSG1Q9BU20 258 aa12.71□□□□□ -0.37
USB1-209ENST00000564387 NPCDR1Q9BY65 106 aa12.71□□□□□ -0.37
USB1-209ENST00000564387 RETNQ9HD89 108 aa12.71□□□□□ -0.37
USB1-209ENST00000564387 DNAJC4Q9NNZ3 241 aa12.71□□□□□ -0.37
USB1-209ENST00000564387 SLC39A9Q9NUM3 307 aa12.71□□□□□ -0.37
USB1-209ENST00000564387 A0A087X0K7 114 aa12.7□□□□□ -0.38
USB1-209ENST00000564387 ID1P41134 155 aa12.7□□□□□ -0.38
USB1-209ENST00000564387 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.7□□□□□ -0.38
USB1-209ENST00000564387 Q6ZRG5 221 aa12.7□□□□□ -0.38
USB1-209ENST00000564387 LINC00305Q7Z4B0 112 aa12.7□□□□□ -0.38
USB1-209ENST00000564387 RNF183Q96D59 192 aa12.7□□□□□ -0.38
USB1-209ENST00000564387 WDR61Q9GZS3 305 aaKnown RBP12.7□□□□□ -0.38
USB1-209ENST00000564387 KNCNA6PVL3 124 aa12.69□□□□□ -0.38
USB1-209ENST00000564387 COX7A2P2O60397 106 aa12.69□□□□□ -0.38
USB1-209ENST00000564387 GIG44P09565 113 aaPredicted RBP12.69□□□□□ -0.38
USB1-209ENST00000564387 B2MP61769 119 aa12.69□□□□□ -0.38
USB1-209ENST00000564387 CLINT1Q14677 625 aa12.69□□□□□ -0.38
USB1-209ENST00000564387 MORN5Q5VZ52 161 aa12.69□□□□□ -0.38
USB1-209ENST00000564387 C10orf113Q5VZT2 155 aa12.69□□□□□ -0.38
USB1-209ENST00000564387 STHQ8IWL8 128 aa12.69□□□□□ -0.38
USB1-209ENST00000564387 OR1L4Q8NGR5 311 aa12.69□□□□□ -0.38
USB1-209ENST00000564387 THAP6Q8TBB0 222 aa12.69□□□□□ -0.38
USB1-209ENST00000564387 CLUHP3Q96NS8 147 aa12.69□□□□□ -0.38
USB1-209ENST00000564387 PFDN5Q99471 154 aa12.69□□□□□ -0.38
USB1-209ENST00000564387 ATP5SQ99766 215 aa12.69□□□□□ -0.38
USB1-209ENST00000564387 PXMP4Q9Y6I8 212 aa12.69□□□□□ -0.38
USB1-209ENST00000564387 AGRNO00468 2067 aa12.69□□□□□ -0.38
USB1-209ENST00000564387 H3BMM0 161 aa12.68□□□□□ -0.38
USB1-209ENST00000564387 FGL1Q08830 312 aa12.68□□□□□ -0.38
USB1-209ENST00000564387 Q5BKY6 102 aa12.68□□□□□ -0.38
USB1-209ENST00000564387 GATAD1Q8WUU5 269 aa12.68□□□□□ -0.38
USB1-209ENST00000564387 PARD6GQ9BYG4 376 aaPredicted RBP12.68□□□□□ -0.38
USB1-209ENST00000564387 TRAV8-2A0A0B4J237 113 aa12.67□□□□□ -0.38
USB1-209ENST00000564387 SPRY2O43597 315 aa12.67□□□□□ -0.38
USB1-209ENST00000564387 SPP1P10451 314 aa12.67□□□□□ -0.38
USB1-209ENST00000564387 HLA-DRB4P13762 266 aa12.67□□□□□ -0.38
USB1-209ENST00000564387 ACTL10Q5JWF8 245 aa12.67□□□□□ -0.38
USB1-209ENST00000564387 MORN3Q6PF18 240 aaPredicted RBP12.67□□□□□ -0.38
USB1-209ENST00000564387 AQP10Q96PS8 301 aa12.67□□□□□ -0.38
USB1-209ENST00000564387 SAV1Q9H4B6 383 aaPredicted RBP12.67□□□□□ -0.38
USB1-209ENST00000564387 HLA-DRB4X5D2U9 266 aa12.67□□□□□ -0.38
USB1-209ENST00000564387 DEFB135Q30KP9 77 aa12.66□□□□□ -0.38
USB1-209ENST00000564387 TMEM41BQ5BJD5 291 aa12.66□□□□□ -0.38
USB1-209ENST00000564387 SPATA31B1PQ5VZV4 182 aa12.66□□□□□ -0.38
USB1-209ENST00000564387 FOXI2Q6ZQN5 318 aa12.66□□□□□ -0.38
USB1-209ENST00000564387 BPIFA4PQ86YQ2 179 aa12.66□□□□□ -0.38
USB1-209ENST00000564387 C16orf92Q96LL3 132 aa12.66□□□□□ -0.38
USB1-209ENST00000564387 C20orf173Q96LM9 149 aa12.66□□□□□ -0.38
USB1-209ENST00000564387 A8MTW9 85 aa12.65□□□□□ -0.38
USB1-209ENST00000564387 G3V3Q6 166 aa12.65□□□□□ -0.38
USB1-209ENST00000564387 IGLC2P0DOY2 106 aa12.65□□□□□ -0.38
USB1-209ENST00000564387 ATF4P18848 351 aaPredicted RBP12.65□□□□□ -0.38
USB1-209ENST00000564387 CXCL2P19875 107 aa12.65□□□□□ -0.38
USB1-209ENST00000564387 GDF5OSQ5U4N7 250 aa12.65□□□□□ -0.38
USB1-209ENST00000564387 LINC00052Q96N35 136 aa12.65□□□□□ -0.38
USB1-209ENST00000564387 WFDC1Q9HC57 220 aa12.65□□□□□ -0.38
USB1-209ENST00000564387 KCNIP2Q9NS61 270 aa12.65□□□□□ -0.38
USB1-209ENST00000564387 DNAH7Q8WXX0 4024 aa12.64□□□□□ -0.39
USB1-209ENST00000564387 CSNK1G2-AS1Q8NCQ2 148 aa12.64□□□□□ -0.39
USB1-209ENST00000564387 HRH4Q9H3N8 390 aa12.64□□□□□ -0.39
USB1-209ENST00000564387 RPRMQ9NS64 109 aa12.64□□□□□ -0.39
USB1-209ENST00000564387 A0A0J9YX75 114 aa12.63□□□□□ -0.39
USB1-209ENST00000564387 CA1P00915 261 aaPredicted RBP12.63□□□□□ -0.39
USB1-209ENST00000564387 C4BPBP20851 252 aa12.63□□□□□ -0.39
USB1-209ENST00000564387 DEFB1P60022 68 aa12.63□□□□□ -0.39
USB1-209ENST00000564387 GCSAMLQ5JQS6 135 aa12.63□□□□□ -0.39
USB1-209ENST00000564387 SAT2Q96F10 170 aaPredicted RBP12.63□□□□□ -0.39
USB1-209ENST00000564387 SMIM3Q9BZL3 60 aa12.63□□□□□ -0.39
USB1-209ENST00000564387 TMEM14CQ9P0S9 112 aa12.63□□□□□ -0.39
USB1-209ENST00000564387 TRAV5A0A0B4J249 113 aa12.62□□□□□ -0.39
USB1-209ENST00000564387 C17orf112F2Z3M2 114 aa12.62□□□□□ -0.39
USB1-209ENST00000564387 IFNA5P01569 189 aa12.62□□□□□ -0.39
USB1-209ENST00000564387 LCN15Q6UWW0 184 aa12.62□□□□□ -0.39
USB1-209ENST00000564387 ZNF709Q8N972 641 aa12.62□□□□□ -0.39
USB1-209ENST00000564387 OR2T35Q8NGX2 323 aa12.62□□□□□ -0.39
USB1-209ENST00000564387 MUC7Q8TAX7 377 aa12.62□□□□□ -0.39
USB1-209ENST00000564387 ZNF331Q9NQX6 463 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms