RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 SRD5A3Q9H8P0 318 aa12.42□□□□□ -0.42
RNF40-206ENST00000564260 MAP6D1Q9H9H5 199 aa12.42□□□□□ -0.42
RNF40-206ENST00000564260 DOK5Q9P104 306 aa12.42□□□□□ -0.42
RNF40-206ENST00000564260 IGKV3-7A0A075B6H7 116 aa12.41□□□□□ -0.42
RNF40-206ENST00000564260 FXYD6-FXYD2A0A087WZ82 144 aa12.41□□□□□ -0.42
RNF40-206ENST00000564260 A0A087X0K7 114 aa12.41□□□□□ -0.42
RNF40-206ENST00000564260 KIR2DL5BA0A0G2JN68 375 aa12.41□□□□□ -0.42
RNF40-206ENST00000564260 KIR2DL5BA0A0G2JPC4 375 aa12.41□□□□□ -0.42
RNF40-206ENST00000564260 HMSDA8MTL9 139 aa12.41□□□□□ -0.42
RNF40-206ENST00000564260 G3V3Q6 166 aa12.41□□□□□ -0.42
RNF40-206ENST00000564260 ZNF345Q14585 488 aa12.41□□□□□ -0.42
RNF40-206ENST00000564260 Q5BKY6 102 aa12.41□□□□□ -0.42
RNF40-206ENST00000564260 KIR2DL5AQ8N109 375 aa12.41□□□□□ -0.42
RNF40-206ENST00000564260 DEFB125Q8N687 156 aa12.41□□□□□ -0.42
RNF40-206ENST00000564260 KIR2DL5BQ8NHK3 375 aa12.41□□□□□ -0.42
RNF40-206ENST00000564260 MRPL32Q9BYC8 188 aaKnown RBP12.41□□□□□ -0.42
RNF40-206ENST00000564260 SLC25A22Q9H936 323 aa12.41□□□□□ -0.42
RNF40-206ENST00000564260 CLEC5AQ9NY25 188 aa12.41□□□□□ -0.42
RNF40-206ENST00000564260 LOC102724200A0A096LPH7 203 aaPredicted RBP12.4□□□□□ -0.42
RNF40-206ENST00000564260 RNF222A6NCQ9 220 aa12.4□□□□□ -0.42
RNF40-206ENST00000564260 TFPI2P48307 235 aa12.4□□□□□ -0.42
RNF40-206ENST00000564260 GUK1Q16774 197 aa12.4□□□□□ -0.42
RNF40-206ENST00000564260 SCRT1Q9BWW7 348 aa12.4□□□□□ -0.42
RNF40-206ENST00000564260 SELENOKQ9Y6D0 94 aa12.4□□□□□ -0.42
RNF40-206ENST00000564260 UBE2CO00762 179 aa12.39□□□□□ -0.43
RNF40-206ENST00000564260 ATF4P18848 351 aaPredicted RBP12.39□□□□□ -0.43
RNF40-206ENST00000564260 APOC4P55056 127 aa12.39□□□□□ -0.43
RNF40-206ENST00000564260 SPATA31B1PQ5VZV4 182 aa12.39□□□□□ -0.43
RNF40-206ENST00000564260 WFDC3Q8IUB2 231 aa12.39□□□□□ -0.43
RNF40-206ENST00000564260 UHRF2Q96PU4 802 aa12.39□□□□□ -0.43
RNF40-206ENST00000564260 PSMG3Q9BT73 122 aaPredicted RBP12.39□□□□□ -0.43
RNF40-206ENST00000564260 BORCS7-ASMTA0A0B4J1R7 106 aa12.38□□□□□ -0.43
RNF40-206ENST00000564260 SOCS3O14543 225 aa12.38□□□□□ -0.43
RNF40-206ENST00000564260 JTBO76095 146 aa12.38□□□□□ -0.43
RNF40-206ENST00000564260 SERF2P84101 59 aa12.38□□□□□ -0.43
RNF40-206ENST00000564260 TCTE3Q8IZS6 198 aa12.38□□□□□ -0.43
RNF40-206ENST00000564260 OR2G3Q8NGZ4 309 aa12.38□□□□□ -0.43
RNF40-206ENST00000564260 GNPNAT1Q96EK6 184 aaPredicted RBP12.38□□□□□ -0.43
RNF40-206ENST00000564260 SMIM3Q9BZL3 60 aa12.38□□□□□ -0.43
RNF40-206ENST00000564260 ZMAT4Q9H898 229 aa12.38□□□□□ -0.43
RNF40-206ENST00000564260 TMEM14CQ9P0S9 112 aa12.38□□□□□ -0.43
RNF40-206ENST00000564260 UBQLN2Q9UHD9 624 aa12.38□□□□□ -0.43
RNF40-206ENST00000564260 ZNF253O75346 499 aa12.37□□□□□ -0.43
RNF40-206ENST00000564260 MBP02144 154 aa12.37□□□□□ -0.43
RNF40-206ENST00000564260 DEFB131AP59861 70 aa12.37□□□□□ -0.43
RNF40-206ENST00000564260 TMEM41BQ5BJD5 291 aa12.37□□□□□ -0.43
RNF40-206ENST00000564260 LCN15Q6UWW0 184 aa12.37□□□□□ -0.43
RNF40-206ENST00000564260 TM2D3Q9BRN9 247 aa12.37□□□□□ -0.43
RNF40-206ENST00000564260 SLC50A1Q9BRV3 221 aa12.37□□□□□ -0.43
RNF40-206ENST00000564260 RSG1Q9BU20 258 aa12.37□□□□□ -0.43
RNF40-206ENST00000564260 MFFQ9GZY8 342 aa12.37□□□□□ -0.43
RNF40-206ENST00000564260 HRH4Q9H3N8 390 aa12.37□□□□□ -0.43
RNF40-206ENST00000564260 WFDC1Q9HC57 220 aa12.37□□□□□ -0.43
RNF40-206ENST00000564260 A0A0D9SG52 128 aa12.36□□□□□ -0.43
RNF40-206ENST00000564260 RBMY1BA6NDE4 496 aaKnown RBP12.36□□□□□ -0.43
RNF40-206ENST00000564260 RBMY1EA6NEQ0 496 aaKnown RBP12.36□□□□□ -0.43
RNF40-206ENST00000564260 MRPS12O15235 138 aaKnown RBP12.36□□□□□ -0.43
RNF40-206ENST00000564260 RBMY1DP0C7P1 496 aaKnown RBP12.36□□□□□ -0.43
RNF40-206ENST00000564260 ZNF688P0C7X2 276 aa12.36□□□□□ -0.43
RNF40-206ENST00000564260 PDE6HQ13956 83 aa12.36□□□□□ -0.43
RNF40-206ENST00000564260 LEMD1Q68G75 181 aa12.36□□□□□ -0.43
RNF40-206ENST00000564260 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.36□□□□□ -0.43
RNF40-206ENST00000564260 C16orf92Q96LL3 132 aa12.36□□□□□ -0.43
RNF40-206ENST00000564260 CLUHP3Q96NS8 147 aa12.36□□□□□ -0.43
RNF40-206ENST00000564260 SPATA25Q9BR10 227 aa12.36□□□□□ -0.43
RNF40-206ENST00000564260 WFDC10AQ9H1F0 79 aa12.36□□□□□ -0.43
RNF40-206ENST00000564260 ARPC5O15511 151 aa12.35□□□□□ -0.43
RNF40-206ENST00000564260 M6PRP20645 277 aa12.35□□□□□ -0.43
RNF40-206ENST00000564260 TAS2R45P59539 299 aa12.35□□□□□ -0.43
RNF40-206ENST00000564260 RHOBP62745 196 aa12.35□□□□□ -0.43
RNF40-206ENST00000564260 HAGHQ16775 308 aa12.35□□□□□ -0.43
RNF40-206ENST00000564260 ACOT6Q3I5F7 207 aaPredicted RBP12.35□□□□□ -0.43
RNF40-206ENST00000564260 PSMG4Q5JS54 123 aa12.35□□□□□ -0.43
RNF40-206ENST00000564260 FAM78BQ5VT40 261 aa12.35□□□□□ -0.43
RNF40-206ENST00000564260 Q6ZWC4 215 aa12.35□□□□□ -0.43
RNF40-206ENST00000564260 SBSPONQ8IVN8 264 aa12.35□□□□□ -0.43
RNF40-206ENST00000564260 STHQ8IWL8 128 aa12.35□□□□□ -0.43
RNF40-206ENST00000564260 FAM24BQ8N5W8 94 aa12.35□□□□□ -0.43
RNF40-206ENST00000564260 CITED4Q96RK1 184 aa12.35□□□□□ -0.43
RNF40-206ENST00000564260 RPRMQ9NS64 109 aa12.35□□□□□ -0.43
RNF40-206ENST00000564260 FUT9Q9Y231 359 aa12.35□□□□□ -0.43
RNF40-206ENST00000564260 IGLC2P0DOY2 106 aa12.34□□□□□ -0.43
RNF40-206ENST00000564260 SPP1P10451 314 aa12.34□□□□□ -0.43
RNF40-206ENST00000564260 FFAR4Q5NUL3 377 aa12.34□□□□□ -0.43
RNF40-206ENST00000564260 MORN3Q6PF18 240 aaPredicted RBP12.34□□□□□ -0.43
RNF40-206ENST00000564260 FOXI2Q6ZQN5 318 aa12.34□□□□□ -0.43
RNF40-206ENST00000564260 APRG1Q8IVJ8 170 aa12.34□□□□□ -0.43
RNF40-206ENST00000564260 KCNRGQ8N5I3 272 aa12.34□□□□□ -0.43
RNF40-206ENST00000564260 ST6GAL2Q96JF0 529 aa12.34□□□□□ -0.43
RNF40-206ENST00000564260 TP53TG1Q9Y2A0 90 aa12.34□□□□□ -0.43
RNF40-206ENST00000564260 NUTF2P61970 127 aaKnown RBP12.33□□□□□ -0.44
RNF40-206ENST00000564260 C17orf77Q96MU5 243 aa12.33□□□□□ -0.44
RNF40-206ENST00000564260 HIST1H1EP10412 219 aaKnown RBP12.32□□□□□ -0.44
RNF40-206ENST00000564260 HLA-DRB4P13762 266 aa12.32□□□□□ -0.44
RNF40-206ENST00000564260 EIF5AP63241 154 aaKnown RBP12.32□□□□□ -0.44
RNF40-206ENST00000564260 TRPT1Q86TN4 253 aaKnown RBP12.32□□□□□ -0.44
RNF40-206ENST00000564260 LRRC20Q8TCA0 184 aa12.32□□□□□ -0.44
RNF40-206ENST00000564260 ARPC5LQ9BPX5 153 aa12.32□□□□□ -0.44
RNF40-206ENST00000564260 CSTL1Q9H114 145 aa12.32□□□□□ -0.44
RNF40-206ENST00000564260 SAV1Q9H4B6 383 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms