RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 C8orf88P0DMB2 117 aa12.89□□□□□ -0.35
CMTM3-208ENST00000564247 RAB14P61106 215 aa12.89□□□□□ -0.35
CMTM3-208ENST00000564247 BLOC1S1P78537 153 aa12.89□□□□□ -0.35
CMTM3-208ENST00000564247 OXLD1Q5BKU9 147 aa12.89□□□□□ -0.35
CMTM3-208ENST00000564247 C1orf194Q5T5A4 169 aa12.89□□□□□ -0.35
CMTM3-208ENST00000564247 MIR17HGQ75NE6 70 aa12.89□□□□□ -0.35
CMTM3-208ENST00000564247 RAB24Q969Q5 203 aa12.89□□□□□ -0.35
CMTM3-208ENST00000564247 SLC25A22Q9H936 323 aa12.89□□□□□ -0.35
CMTM3-208ENST00000564247 U3KQE9 123 aa12.89□□□□□ -0.35
CMTM3-208ENST00000564247 TGP01266 2768 aa12.88□□□□□ -0.35
CMTM3-208ENST00000564247 IGHV3-49A0A0A0MS15 119 aa12.88□□□□□ -0.35
CMTM3-208ENST00000564247 TMEM213A2RRL7 107 aa12.88□□□□□ -0.35
CMTM3-208ENST00000564247 BUB3O43684 328 aa12.88□□□□□ -0.35
CMTM3-208ENST00000564247 H2AFB1P0C5Y9 115 aa12.88□□□□□ -0.35
CMTM3-208ENST00000564247 CBLN1P23435 193 aa12.88□□□□□ -0.35
CMTM3-208ENST00000564247 IFITM2Q01629 132 aa12.88□□□□□ -0.35
CMTM3-208ENST00000564247 KHDC3LQ587J8 217 aa12.88□□□□□ -0.35
CMTM3-208ENST00000564247 SPATA31B1PQ5VZV4 182 aa12.88□□□□□ -0.35
CMTM3-208ENST00000564247 OR8I2Q8N0Y5 310 aa12.88□□□□□ -0.35
CMTM3-208ENST00000564247 STXBP6Q8NFX7 210 aa12.88□□□□□ -0.35
CMTM3-208ENST00000564247 SAT2Q96F10 170 aaPredicted RBP12.88□□□□□ -0.35
CMTM3-208ENST00000564247 GPR82Q96P67 336 aa12.88□□□□□ -0.35
CMTM3-208ENST00000564247 RHPN1-AS1Q9BWJ2 59 aa12.88□□□□□ -0.35
CMTM3-208ENST00000564247 SCRT1Q9BWW7 348 aa12.88□□□□□ -0.35
CMTM3-208ENST00000564247 IGHV3OR16-13A0A075B7E8 117 aa12.87□□□□□ -0.35
CMTM3-208ENST00000564247 IGHV3-74A0A0B4J1X5 117 aa12.87□□□□□ -0.35
CMTM3-208ENST00000564247 FOLR2P14207 255 aa12.87□□□□□ -0.35
CMTM3-208ENST00000564247 FHITP49789 147 aa12.87□□□□□ -0.35
CMTM3-208ENST00000564247 LEMD1Q68G75 181 aa12.87□□□□□ -0.35
CMTM3-208ENST00000564247 LCN15Q6UWW0 184 aa12.87□□□□□ -0.35
CMTM3-208ENST00000564247 BPIFA4PQ86YQ2 179 aa12.87□□□□□ -0.35
CMTM3-208ENST00000564247 LINC00482Q8N8I6 264 aa12.87□□□□□ -0.35
CMTM3-208ENST00000564247 SFT2D1Q8WV19 159 aa12.87□□□□□ -0.35
CMTM3-208ENST00000564247 MBD3L1Q8WWY6 194 aa12.87□□□□□ -0.35
CMTM3-208ENST00000564247 TRAV5A0A0B4J249 113 aa12.86□□□□□ -0.35
CMTM3-208ENST00000564247 IGHV3-66A0A0C4DH42 116 aa12.86□□□□□ -0.35
CMTM3-208ENST00000564247 CHEK1O14757 476 aa12.86□□□□□ -0.35
CMTM3-208ENST00000564247 OR7C2O60412 319 aa12.86□□□□□ -0.35
CMTM3-208ENST00000564247 APOHP02749 345 aaPredicted RBP12.86□□□□□ -0.35
CMTM3-208ENST00000564247 IGLL1P15814 213 aa12.86□□□□□ -0.35
CMTM3-208ENST00000564247 RPL7P18124 248 aaKnown RBP12.86□□□□□ -0.35
CMTM3-208ENST00000564247 C16orf54Q6UWD8 224 aa12.86□□□□□ -0.35
CMTM3-208ENST00000564247 MAP1LC3B2A6NCE7 125 aa12.85□□□□□ -0.35
CMTM3-208ENST00000564247 HELTA6NFD8 242 aa12.85□□□□□ -0.35
CMTM3-208ENST00000564247 HMGB3O15347 200 aaKnown RBP12.85□□□□□ -0.35
CMTM3-208ENST00000564247 CXorf1O96002 111 aa12.85□□□□□ -0.35
CMTM3-208ENST00000564247 HBE1P02100 147 aa12.85□□□□□ -0.35
CMTM3-208ENST00000564247 CD5P06127 495 aa12.85□□□□□ -0.35
CMTM3-208ENST00000564247 CSN3P07498 182 aa12.85□□□□□ -0.35
CMTM3-208ENST00000564247 STAG3L2P0CL84 134 aa12.85□□□□□ -0.35
CMTM3-208ENST00000564247 STAG3L3P0CL85 134 aa12.85□□□□□ -0.35
CMTM3-208ENST00000564247 ZNF726P1Q15940 193 aa12.85□□□□□ -0.35
CMTM3-208ENST00000564247 MORN5Q5VZ52 161 aa12.85□□□□□ -0.35
CMTM3-208ENST00000564247 PQLC2Q6ZP29 291 aa12.85□□□□□ -0.35
CMTM3-208ENST00000564247 DYNLRB2Q8TF09 96 aa12.85□□□□□ -0.35
CMTM3-208ENST00000564247 PAXXQ9BUH6 204 aa12.85□□□□□ -0.35
CMTM3-208ENST00000564247 SLC25A2Q9BXI2 301 aa12.85□□□□□ -0.35
CMTM3-208ENST00000564247 MAP1LC3BQ9GZQ8 125 aa12.85□□□□□ -0.35
CMTM3-208ENST00000564247 OR51M1Q9H341 326 aa12.85□□□□□ -0.35
CMTM3-208ENST00000564247 ZNF785A8K8V0 405 aa12.84□□□□□ -0.35
CMTM3-208ENST00000564247 EIF3GO75821 320 aaKnown RBP eCLIP12.84□□□□□ -0.35
CMTM3-208ENST00000564247 GALR1P47211 349 aa12.84□□□□□ -0.35
CMTM3-208ENST00000564247 IL34Q6ZMJ4 242 aa12.84□□□□□ -0.35
CMTM3-208ENST00000564247 FAM167A-AS1Q96KT0 104 aa12.84□□□□□ -0.35
CMTM3-208ENST00000564247 SIGLEC8Q9NYZ4 499 aa12.84□□□□□ -0.35
CMTM3-208ENST00000564247 TMEM14CQ9P0S9 112 aa12.84□□□□□ -0.35
CMTM3-208ENST00000564247 ARL14EPLP0DKL9 152 aa12.83□□□□□ -0.36
CMTM3-208ENST00000564247 ATF4P18848 351 aaPredicted RBP12.83□□□□□ -0.36
CMTM3-208ENST00000564247 RPL11P62913 178 aaKnown RBP12.83□□□□□ -0.36
CMTM3-208ENST00000564247 SIGLEC15Q6ZMC9 328 aa12.83□□□□□ -0.36
CMTM3-208ENST00000564247 SSX7Q7RTT5 188 aa12.83□□□□□ -0.36
CMTM3-208ENST00000564247 IQCF2Q8IXL9 164 aa12.83□□□□□ -0.36
CMTM3-208ENST00000564247 MCRIP2Q9BUT9 160 aaKnown RBP12.83□□□□□ -0.36
CMTM3-208ENST00000564247 TRAV1-1A0A0B4J248 108 aa12.82□□□□□ -0.36
CMTM3-208ENST00000564247 SAP30O75446 220 aa12.82□□□□□ -0.36
CMTM3-208ENST00000564247 HIST1H1EP10412 219 aaKnown RBP12.82□□□□□ -0.36
CMTM3-208ENST00000564247 EDN2P20800 178 aa12.82□□□□□ -0.36
CMTM3-208ENST00000564247 FGF8P55075 233 aaPredicted RBP12.82□□□□□ -0.36
CMTM3-208ENST00000564247 TCF24Q7RTU0 167 aa12.82□□□□□ -0.36
CMTM3-208ENST00000564247 GLMPQ8WWB7 406 aa12.82□□□□□ -0.36
CMTM3-208ENST00000564247 TMEM167BQ9NRX6 74 aa12.82□□□□□ -0.36
CMTM3-208ENST00000564247 A0A1B0GV50 99 aa12.81□□□□□ -0.36
CMTM3-208ENST00000564247 RGS13O14921 159 aa12.81□□□□□ -0.36
CMTM3-208ENST00000564247 PRB2P02812 416 aaPredicted RBP12.81□□□□□ -0.36
CMTM3-208ENST00000564247 GCHFRP30047 84 aa12.81□□□□□ -0.36
CMTM3-208ENST00000564247 MEOX2P50222 304 aa12.81□□□□□ -0.36
CMTM3-208ENST00000564247 UBE2L3P68036 154 aaKnown RBP12.81□□□□□ -0.36
CMTM3-208ENST00000564247 ADAMTSL5Q6ZMM2 481 aa12.81□□□□□ -0.36
CMTM3-208ENST00000564247 RBPMS2Q6ZRY4 209 aaKnown RBP12.81□□□□□ -0.36
CMTM3-208ENST00000564247 GPR61Q9BZJ8 451 aa12.81□□□□□ -0.36
CMTM3-208ENST00000564247 HRH4Q9H3N8 390 aa12.81□□□□□ -0.36
CMTM3-208ENST00000564247 MLXQ9UH92 298 aa12.81□□□□□ -0.36
CMTM3-208ENST00000564247 OR10J4P0C629 311 aa12.8□□□□□ -0.36
CMTM3-208ENST00000564247 NBEAP1P0C6P0 100 aa12.8□□□□□ -0.36
CMTM3-208ENST00000564247 PYYP10082 97 aa12.8□□□□□ -0.36
CMTM3-208ENST00000564247 PSMB3P49720 205 aa12.8□□□□□ -0.36
CMTM3-208ENST00000564247 PPT1P50897 306 aa12.8□□□□□ -0.36
CMTM3-208ENST00000564247 INSL3P51460 131 aa12.8□□□□□ -0.36
CMTM3-208ENST00000564247 PAFAH1B2P68402 229 aa12.8□□□□□ -0.36
CMTM3-208ENST00000564247 GUK1Q16774 197 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms