RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 FOXI2Q6ZQN5 318 aa22.36■■□□□ 1.17
CMTM4-204ENST00000563952 SAV1Q9H4B6 383 aaPredicted RBP22.36■■□□□ 1.17
CMTM4-204ENST00000563952 PRAF2O60831 178 aa22.35■■□□□ 1.17
CMTM4-204ENST00000563952 SIX6O95475 246 aa22.35■■□□□ 1.17
CMTM4-204ENST00000563952 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa22.35■■□□□ 1.17
CMTM4-204ENST00000563952 C17orf77Q96MU5 243 aa22.35■■□□□ 1.17
CMTM4-204ENST00000563952 LYRM2Q9NU23 88 aaPredicted RBP22.35■■□□□ 1.17
CMTM4-204ENST00000563952 XCL2Q9UBD3 114 aa22.35■■□□□ 1.17
CMTM4-204ENST00000563952 NUPR2A6NF83 97 aa22.34■■□□□ 1.17
CMTM4-204ENST00000563952 JTBO76095 146 aa22.34■■□□□ 1.17
CMTM4-204ENST00000563952 FGL1Q08830 312 aa22.34■■□□□ 1.17
CMTM4-204ENST00000563952 CSNK1G2-AS1Q8NCQ2 148 aa22.34■■□□□ 1.17
CMTM4-204ENST00000563952 C20orf173Q96LM9 149 aa22.34■■□□□ 1.17
CMTM4-204ENST00000563952 MGST2Q99735 147 aa22.34■■□□□ 1.17
CMTM4-204ENST00000563952 C1QTNF4Q9BXJ3 329 aa22.34■■□□□ 1.17
CMTM4-204ENST00000563952 IGSF23A1L1A6 192 aa22.33■■□□□ 1.17
CMTM4-204ENST00000563952 PATE2Q6UY27 113 aa22.33■■□□□ 1.17
CMTM4-204ENST00000563952 S100A7AQ86SG5 101 aa22.33■■□□□ 1.17
CMTM4-204ENST00000563952 Q8NAQ8 132 aa22.33■■□□□ 1.17
CMTM4-204ENST00000563952 OR4B1Q8NGF8 309 aa22.33■■□□□ 1.17
CMTM4-204ENST00000563952 ARV1Q9H2C2 271 aa22.33■■□□□ 1.17
CMTM4-204ENST00000563952 RPRMQ9NS64 109 aa22.33■■□□□ 1.17
CMTM4-204ENST00000563952 F6UB75 175 aa22.32■■□□□ 1.16
CMTM4-204ENST00000563952 RPL7P18124 248 aaKnown RBP22.32■■□□□ 1.16
CMTM4-204ENST00000563952 SULT1A1P50225 295 aa22.32■■□□□ 1.16
CMTM4-204ENST00000563952 FXYD7P58549 80 aa22.32■■□□□ 1.16
CMTM4-204ENST00000563952 EBLN2Q6P2I7 272 aa22.32■■□□□ 1.16
CMTM4-204ENST00000563952 C11orf45Q8TAV5 145 aa22.32■■□□□ 1.16
CMTM4-204ENST00000563952 UQCC1Q9NVA1 299 aa22.32■■□□□ 1.16
CMTM4-204ENST00000563952 IGHV4-28A0A0C4DH34 117 aa22.31■■□□□ 1.16
CMTM4-204ENST00000563952 ZNF705EA8MWA4 302 aaPredicted RBP22.31■■□□□ 1.16
CMTM4-204ENST00000563952 NANOS2P60321 138 aaKnown RBP22.31■■□□□ 1.16
CMTM4-204ENST00000563952 PXDC1Q5TGL8 231 aa22.31■■□□□ 1.16
CMTM4-204ENST00000563952 CEMP1Q6PRD7 247 aaPredicted RBP22.31■■□□□ 1.16
CMTM4-204ENST00000563952 STX12Q86Y82 276 aa22.31■■□□□ 1.16
CMTM4-204ENST00000563952 TMEM252Q8N6L7 170 aa22.31■■□□□ 1.16
CMTM4-204ENST00000563952 X6R8D5 127 aa22.31■■□□□ 1.16
CMTM4-204ENST00000563952 RYR2Q92736 4967 aa22.31■■□□□ 1.16
CMTM4-204ENST00000563952 MIFP14174 115 aa22.3■■□□□ 1.16
CMTM4-204ENST00000563952 CAMLGP49069 296 aa22.3■■□□□ 1.16
CMTM4-204ENST00000563952 RAB31Q13636 194 aa22.3■■□□□ 1.16
CMTM4-204ENST00000563952 IGFL4Q6B9Z1 124 aa22.3■■□□□ 1.16
CMTM4-204ENST00000563952 MARVELD1Q9BSK0 173 aa22.3■■□□□ 1.16
CMTM4-204ENST00000563952 COX7A2P2O60397 106 aa22.29■■□□□ 1.16
CMTM4-204ENST00000563952 FAM78BQ5VT40 261 aa22.29■■□□□ 1.16
CMTM4-204ENST00000563952 SPATA31B1PQ5VZV4 182 aa22.29■■□□□ 1.16
CMTM4-204ENST00000563952 A0A0J9YX75 114 aa22.28■■□□□ 1.16
CMTM4-204ENST00000563952 UBE2L5PA0A1B0GUS4 154 aa22.28■■□□□ 1.16
CMTM4-204ENST00000563952 RBMY1A1P0DJD3 496 aaKnown RBP22.28■■□□□ 1.16
CMTM4-204ENST00000563952 RBMY1CP0DJD4 496 aa22.28■■□□□ 1.16
CMTM4-204ENST00000563952 S100A11P31949 105 aa22.28■■□□□ 1.16
CMTM4-204ENST00000563952 HBG1P69891 147 aa22.28■■□□□ 1.16
CMTM4-204ENST00000563952 HBG2P69892 147 aa22.28■■□□□ 1.16
CMTM4-204ENST00000563952 RBMY1FQ15415 496 aaKnown RBP22.28■■□□□ 1.16
CMTM4-204ENST00000563952 LINC00305Q7Z4B0 112 aa22.28■■□□□ 1.16
CMTM4-204ENST00000563952 RNF182Q8N6D2 247 aa22.28■■□□□ 1.16
CMTM4-204ENST00000563952 PHLDA1Q8WV24 401 aaPredicted RBP22.28■■□□□ 1.16
CMTM4-204ENST00000563952 MFFQ9GZY8 342 aa22.28■■□□□ 1.16
CMTM4-204ENST00000563952 WDR83OSQ9Y284 106 aa22.28■■□□□ 1.16
CMTM4-204ENST00000563952 LYSTQ99698 3801 aa22.27■■□□□ 1.16
CMTM4-204ENST00000563952 TRAV8-2A0A0B4J237 113 aa22.27■■□□□ 1.16
CMTM4-204ENST00000563952 LRRC37A5PQ49AS3 106 aa22.27■■□□□ 1.16
CMTM4-204ENST00000563952 NMES1Q9C002 83 aa22.27■■□□□ 1.16
CMTM4-204ENST00000563952 RNF24Q9Y225 148 aa22.27■■□□□ 1.16
CMTM4-204ENST00000563952 RLN2P04090 185 aa22.26■■□□□ 1.15
CMTM4-204ENST00000563952 BAXQ07812 192 aa22.26■■□□□ 1.15
CMTM4-204ENST00000563952 VWC2Q2TAL6 325 aa22.26■■□□□ 1.15
CMTM4-204ENST00000563952 MIC13Q5XKP0 118 aa22.26■■□□□ 1.15
CMTM4-204ENST00000563952 CLUHP3Q96NS8 147 aa22.26■■□□□ 1.15
CMTM4-204ENST00000563952 SLC35B3Q9H1N7 401 aa22.26■■□□□ 1.15
CMTM4-204ENST00000563952 KLK5Q9Y337 293 aaPredicted RBP22.26■■□□□ 1.15
CMTM4-204ENST00000563952 SACSQ9NZJ4 4579 aa22.26■■□□□ 1.15
CMTM4-204ENST00000563952 SSNA1O43805 119 aa22.25■■□□□ 1.15
CMTM4-204ENST00000563952 PSG9Q00887 426 aa22.25■■□□□ 1.15
CMTM4-204ENST00000563952 C10orf113Q5VZT2 155 aa22.25■■□□□ 1.15
CMTM4-204ENST00000563952 ZNF709Q8N972 641 aa22.24■■□□□ 1.15
CMTM4-204ENST00000563952 LRRC20Q8TCA0 184 aa22.24■■□□□ 1.15
CMTM4-204ENST00000563952 TMEM37Q8WXS4 190 aa22.24■■□□□ 1.15
CMTM4-204ENST00000563952 OR5AC2Q9NZP5 309 aa22.24■■□□□ 1.15
CMTM4-204ENST00000563952 ELOA3CA0A087WX78 387 aaPredicted RBP22.23■■□□□ 1.15
CMTM4-204ENST00000563952 A0A087X0K7 114 aa22.23■■□□□ 1.15
CMTM4-204ENST00000563952 CYCSP99999 105 aaKnown RBP22.23■■□□□ 1.15
CMTM4-204ENST00000563952 Q6ZRG5 221 aa22.23■■□□□ 1.15
CMTM4-204ENST00000563952 ZNF738Q8NE65 137 aa22.23■■□□□ 1.15
CMTM4-204ENST00000563952 IGHV3OR16-12A0A075B7B8 117 aa22.22■■□□□ 1.15
CMTM4-204ENST00000563952 E5RGE8 158 aa22.22■■□□□ 1.15
CMTM4-204ENST00000563952 FGF7P21781 194 aa22.22■■□□□ 1.15
CMTM4-204ENST00000563952 ATP6V1FQ16864 119 aa22.22■■□□□ 1.15
CMTM4-204ENST00000563952 MRPS12O15235 138 aaKnown RBP22.21■■□□□ 1.15
CMTM4-204ENST00000563952 SNRPCP09234 159 aaKnown RBP22.21■■□□□ 1.15
CMTM4-204ENST00000563952 H2BFSP57053 126 aa22.21■■□□□ 1.15
CMTM4-204ENST00000563952 PRR20EP86478 221 aa22.21■■□□□ 1.15
CMTM4-204ENST00000563952 PRR20CP86479 221 aa22.21■■□□□ 1.15
CMTM4-204ENST00000563952 PRR20DP86480 221 aa22.21■■□□□ 1.15
CMTM4-204ENST00000563952 PRR20BP86481 221 aa22.21■■□□□ 1.15
CMTM4-204ENST00000563952 PRR20AP86496 221 aa22.21■■□□□ 1.15
CMTM4-204ENST00000563952 NHLH2Q02577 135 aa22.21■■□□□ 1.15
CMTM4-204ENST00000563952 MORN5Q5VZ52 161 aa22.21■■□□□ 1.15
CMTM4-204ENST00000563952 SLC25A31Q9H0C2 315 aa22.21■■□□□ 1.15
CMTM4-204ENST00000563952 DNAJC4Q9NNZ3 241 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms