RNA–Protein interactions for RNA: ENST00000563686.5

TCF4-218, Transcript of transcription factor 4, human

TSL 2

Gene TCF4, Length 6,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-218	ENST00000563686	KAAG1	Q9UBP8	84 aa		4.58	□□□□□ -1.68
TCF4-218	ENST00000563686	RAX	Q9Y2V3	346 aa		4.58	□□□□□ -1.68
TCF4-218	ENST00000563686	MOB4	Q9Y3A3	225 aa		4.58	□□□□□ -1.68
TCF4-218	ENST00000563686	PSMB2	P49721	201 aa		4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	DAZAP2	Q15038	168 aa	Predicted RBP	4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	SMPX	Q9UHP9	88 aa		4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	IGKV3-7	A0A075B6H7	116 aa		4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	OVOL1	O14753	267 aa		4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	PRB4	P10163	310 aa	Predicted RBP	4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	HOXB4	P17483	251 aa	Predicted RBP	4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	IFI27	P40305	119 aa	Predicted RBP	4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	BRWD1-AS2	P59051	145 aa		4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	SEC11A	P67812	179 aa		4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	PRO3102	Q9H379	93 aa		4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	DCAF16	Q9NXF7	216 aa		4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	SAMD13	Q5VXD3	122 aa		4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	HEATR5A	Q86XA9	2040 aa		4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	DKK4	Q9UBT3	224 aa		4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	PLP1	P60201	277 aa		4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	RPL24	P83731	157 aa	Known RBP	4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	ERCC8	Q13216	396 aa		4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	LCN12	Q6JVE5	192 aa		4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	NPB	Q8NG41	125 aa		4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	DUX5	Q96PT3	197 aa		4.57	□□□□□ -1.68
TCF4-218	ENST00000563686	TRAV41	A0A0B4J266	112 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	SEM1	Q6ZVN7	128 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	OR9G4	Q8NGQ1	327 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	ZC2HC1A	Q96GY0	325 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	COX11	Q9Y6N1	276 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686		H3BVH4	76 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	NUPR1	O60356	82 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	ESD	P10768	282 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	OR5A1	Q8NGJ0	315 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	TRAV21	A0A0B4J279	112 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	IGLC7	A0M8Q6	106 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	GP9	P14770	177 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	WT1	P19544	449 aa	Predicted RBP	4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	SNRPD3	P62318	126 aa	Known RBP	4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	PAX8	Q06710	450 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	PRR30	Q53SZ7	412 aa	Predicted RBP	4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	FAM159A	Q6UWV7	190 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	FAM168A	Q92567	244 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	TMEM208	Q9BTX3	173 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	DYNLRB2	Q8TF09	96 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	CTSZ	Q9UBR2	303 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	IGHV3-35	A0A0C4DH35	117 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	ARMS2	P0C7Q2	107 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	ZNF56	Q15929	161 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	C15orf32	Q32M92	178 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	DMRTC2	Q8IXT2	367 aa	Predicted RBP	4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	ZNF502	Q8TBZ5	544 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	IFI27L1	Q96BM0	104 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	LINC00574	Q9H8X3	128 aa		4.56	□□□□□ -1.68
TCF4-218	ENST00000563686	IGHV3OR16-8	A0A075B7F1	116 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	IGHV3-49	A0A0A0MS15	119 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686		A0A0G2JLM5	398 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	NCR2	O95944	276 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	IGLC2	P0DOY2	106 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	IGLC3	P0DOY3	106 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	EFNA4	P52798	201 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	UBE2V1	Q13404	147 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	ORMDL2	Q53FV1	153 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	C1orf229	Q6ZS94	237 aa	Predicted RBP	4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	SPCS1	Q9Y6A9	102 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	TRBV6-1	A0A0K0K1D8	114 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686		H3BUT2	72 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	NPFF	O15130	113 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	CD33	P20138	364 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	IGHV3OR16-13	A0A075B7E8	117 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	TRAV8-1	A0A0A6YYK1	113 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	IGHV3-74	A0A0B4J1X5	117 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686		K7EM74	188 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686		K7ENP7	123 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	NDUFB8	O95169	186 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	COX6B1	P14854	86 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	PLA2G5	P39877	138 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	KLK15	Q9H2R5	256 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	FREM3	P0C091	2139 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686		I3L2K1	104 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686		M0R381	172 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	PRSS33	Q8NF86	280 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	FAM167A-AS1	Q96KT0	104 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	PCDH15	Q96QU1	1955 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	IGLC1	P0CG04	106 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	ZNF138	P52744	262 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	DLX1	P56177	255 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	MORN5	Q5VZ52	161 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	AMMECR1L	Q6DCA0	310 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	IL17REL	Q6ZVW7	336 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686	KIR2DL4	Q99706	377 aa		4.55	□□□□□ -1.68
TCF4-218	ENST00000563686		A0A087X0K7	114 aa		4.54	□□□□□ -1.68
TCF4-218	ENST00000563686	IGHV2-70D	A0A0C4DH43	119 aa		4.54	□□□□□ -1.68
TCF4-218	ENST00000563686	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.54	□□□□□ -1.68
TCF4-218	ENST00000563686	TMEM213	A2RRL7	107 aa		4.54	□□□□□ -1.68
TCF4-218	ENST00000563686	SMKR1	H3BMG3	65 aa		4.54	□□□□□ -1.68
TCF4-218	ENST00000563686	CIDEA	O60543	219 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms