RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 VWC2Q2TAL6 325 aa20.61■□□□□ 0.89
NME3-203ENST00000563367 C20orf173Q96LM9 149 aa20.61■□□□□ 0.89
NME3-203ENST00000563367 UQCC1Q9NVA1 299 aa20.61■□□□□ 0.89
NME3-203ENST00000563367 HLA-DRB4X5D2U9 266 aa20.61■□□□□ 0.89
NME3-203ENST00000563367 MEOX2P50222 304 aa20.6■□□□□ 0.89
NME3-203ENST00000563367 STX12Q86Y82 276 aa20.6■□□□□ 0.89
NME3-203ENST00000563367 C16orf92Q96LL3 132 aa20.6■□□□□ 0.89
NME3-203ENST00000563367 ARV1Q9H2C2 271 aa20.6■□□□□ 0.89
NME3-203ENST00000563367 SAV1Q9H4B6 383 aaPredicted RBP20.6■□□□□ 0.89
NME3-203ENST00000563367 CLEC5AQ9NY25 188 aa20.6■□□□□ 0.89
NME3-203ENST00000563367 WDR83OSQ9Y284 106 aa20.6■□□□□ 0.89
NME3-203ENST00000563367 LYSTQ99698 3801 aa20.6■□□□□ 0.89
NME3-203ENST00000563367 H0YIZ8 118 aa20.59■□□□□ 0.89
NME3-203ENST00000563367 S100A11P31949 105 aa20.59■□□□□ 0.89
NME3-203ENST00000563367 LRRC37A5PQ49AS3 106 aa20.59■□□□□ 0.89
NME3-203ENST00000563367 TMEM41BQ5BJD5 291 aa20.59■□□□□ 0.89
NME3-203ENST00000563367 CSNK1G2-AS1Q8NCQ2 148 aa20.59■□□□□ 0.89
NME3-203ENST00000563367 OR5AC2Q9NZP5 309 aa20.59■□□□□ 0.89
NME3-203ENST00000563367 SSNA1O43805 119 aa20.58■□□□□ 0.89
NME3-203ENST00000563367 CAMLGP49069 296 aa20.58■□□□□ 0.89
NME3-203ENST00000563367 PXDC1Q5TGL8 231 aa20.58■□□□□ 0.89
NME3-203ENST00000563367 SAMD13Q5VXD3 122 aa20.58■□□□□ 0.89
NME3-203ENST00000563367 FOXI2Q6ZQN5 318 aa20.58■□□□□ 0.89
NME3-203ENST00000563367 UBE2L5PA0A1B0GUS4 154 aa20.57■□□□□ 0.88
NME3-203ENST00000563367 F6UB75 175 aa20.57■□□□□ 0.88
NME3-203ENST00000563367 HBG1P69891 147 aa20.57■□□□□ 0.88
NME3-203ENST00000563367 HBG2P69892 147 aa20.57■□□□□ 0.88
NME3-203ENST00000563367 SACSQ9NZJ4 4579 aa20.56■□□□□ 0.88
NME3-203ENST00000563367 TRAV8-2A0A0B4J237 113 aa20.56■□□□□ 0.88
NME3-203ENST00000563367 IGKV3-20P01619 116 aa20.56■□□□□ 0.88
NME3-203ENST00000563367 RPL7P18124 248 aaKnown RBP20.56■□□□□ 0.88
NME3-203ENST00000563367 ATF4P18848 351 aaPredicted RBP20.56■□□□□ 0.88
NME3-203ENST00000563367 CYCSP99999 105 aaKnown RBP20.56■□□□□ 0.88
NME3-203ENST00000563367 NHLH2Q02577 135 aa20.56■□□□□ 0.88
NME3-203ENST00000563367 RAB31Q13636 194 aa20.56■□□□□ 0.88
NME3-203ENST00000563367 MIC13Q5XKP0 118 aa20.56■□□□□ 0.88
NME3-203ENST00000563367 IGFL4Q6B9Z1 124 aa20.56■□□□□ 0.88
NME3-203ENST00000563367 TMEM37Q8WXS4 190 aa20.56■□□□□ 0.88
NME3-203ENST00000563367 E5RGE8 158 aa20.55■□□□□ 0.88
NME3-203ENST00000563367 DEFB4AO15263 64 aa20.55■□□□□ 0.88
NME3-203ENST00000563367 RLN2P04090 185 aa20.55■□□□□ 0.88
NME3-203ENST00000563367 PRR20EP86478 221 aa20.55■□□□□ 0.88
NME3-203ENST00000563367 PRR20CP86479 221 aa20.55■□□□□ 0.88
NME3-203ENST00000563367 PRR20DP86480 221 aa20.55■□□□□ 0.88
NME3-203ENST00000563367 PRR20BP86481 221 aa20.55■□□□□ 0.88
NME3-203ENST00000563367 PRR20AP86496 221 aa20.55■□□□□ 0.88
NME3-203ENST00000563367 FGL1Q08830 312 aa20.55■□□□□ 0.88
NME3-203ENST00000563367 PMS2P11Q13670 270 aa20.55■□□□□ 0.88
NME3-203ENST00000563367 LINC00305Q7Z4B0 112 aa20.55■□□□□ 0.88
NME3-203ENST00000563367 XCL2Q9UBD3 114 aa20.55■□□□□ 0.88
NME3-203ENST00000563367 MRPS12O15235 138 aaKnown RBP20.54■□□□□ 0.88
NME3-203ENST00000563367 COX7A2P2O60397 106 aa20.54■□□□□ 0.88
NME3-203ENST00000563367 BAXQ07812 192 aa20.54■□□□□ 0.88
NME3-203ENST00000563367 MORN5Q5VZ52 161 aa20.54■□□□□ 0.88
NME3-203ENST00000563367 S100A7AQ86SG5 101 aa20.54■□□□□ 0.88
NME3-203ENST00000563367 C11orf68Q9H3H3 251 aaKnown RBP20.54■□□□□ 0.88
NME3-203ENST00000563367 RPRMQ9NS64 109 aa20.54■□□□□ 0.88
NME3-203ENST00000563367 ZNF705EA8MWA4 302 aaPredicted RBP20.53■□□□□ 0.88
NME3-203ENST00000563367 NUTF2P61970 127 aaKnown RBP20.53■□□□□ 0.88
NME3-203ENST00000563367 ATP6V1FQ16864 119 aa20.53■□□□□ 0.88
NME3-203ENST00000563367 RNF182Q8N6D2 247 aa20.53■□□□□ 0.88
NME3-203ENST00000563367 Q8NAQ8 132 aa20.53■□□□□ 0.88
NME3-203ENST00000563367 PPP1R1CQ8WVI7 109 aa20.53■□□□□ 0.88
NME3-203ENST00000563367 X6R8D5 127 aa20.53■□□□□ 0.88
NME3-203ENST00000563367 A0A0J9YX75 114 aa20.52■□□□□ 0.88
NME3-203ENST00000563367 CXorf65A6NEN9 183 aa20.52■□□□□ 0.88
NME3-203ENST00000563367 FXYD7P58549 80 aa20.52■□□□□ 0.88
NME3-203ENST00000563367 C10orf113Q5VZT2 155 aa20.52■□□□□ 0.88
NME3-203ENST00000563367 OR4B1Q8NGF8 309 aa20.52■□□□□ 0.88
NME3-203ENST00000563367 CLUHP3Q96NS8 147 aa20.52■□□□□ 0.88
NME3-203ENST00000563367 RNF126Q9BV68 326 aa20.52■□□□□ 0.88
NME3-203ENST00000563367 SLC25A31Q9H0C2 315 aa20.52■□□□□ 0.88
NME3-203ENST00000563367 ELOA3CA0A087WX78 387 aaPredicted RBP20.51■□□□□ 0.87
NME3-203ENST00000563367 A0A087X0K7 114 aa20.51■□□□□ 0.87
NME3-203ENST00000563367 FGF7P21781 194 aa20.51■□□□□ 0.87
NME3-203ENST00000563367 OPCMLQ14982 345 aa20.51■□□□□ 0.87
NME3-203ENST00000563367 FAM78BQ5VT40 261 aa20.51■□□□□ 0.87
NME3-203ENST00000563367 SPATA31B1PQ5VZV4 182 aa20.51■□□□□ 0.87
NME3-203ENST00000563367 EBLN2Q6P2I7 272 aa20.51■□□□□ 0.87
NME3-203ENST00000563367 C1QTNF4Q9BXJ3 329 aa20.51■□□□□ 0.87
NME3-203ENST00000563367 DNAJC4Q9NNZ3 241 aa20.51■□□□□ 0.87
NME3-203ENST00000563367 ALG5Q9Y673 324 aa20.51■□□□□ 0.87
NME3-203ENST00000563367 LCE6AA0A183 80 aa20.5■□□□□ 0.87
NME3-203ENST00000563367 PTTG1O95997 202 aa20.5■□□□□ 0.87
NME3-203ENST00000563367 RBMY1A1P0DJD3 496 aaKnown RBP20.5■□□□□ 0.87
NME3-203ENST00000563367 RBMY1CP0DJD4 496 aa20.5■□□□□ 0.87
NME3-203ENST00000563367 RPL29P47914 159 aaKnown RBP20.5■□□□□ 0.87
NME3-203ENST00000563367 RBMY1FQ15415 496 aaKnown RBP20.5■□□□□ 0.87
NME3-203ENST00000563367 Q6ZRG5 221 aa20.5■□□□□ 0.87
NME3-203ENST00000563367 ZNF709Q8N972 641 aa20.5■□□□□ 0.87
NME3-203ENST00000563367 OR5C1Q8NGR4 320 aa20.5■□□□□ 0.87
NME3-203ENST00000563367 CHAC2Q8WUX2 184 aa20.5■□□□□ 0.87
NME3-203ENST00000563367 SLC39A9Q9NUM3 307 aa20.5■□□□□ 0.87
NME3-203ENST00000563367 IGHV4-28A0A0C4DH34 117 aa20.49■□□□□ 0.87
NME3-203ENST00000563367 MPC2O95563 127 aa20.49■□□□□ 0.87
NME3-203ENST00000563367 HLA-DMBP28068 263 aa20.49■□□□□ 0.87
NME3-203ENST00000563367 PLECQ15149 4684 aaKnown RBP20.49■□□□□ 0.87
NME3-203ENST00000563367 SLC35B3Q9H1N7 401 aa20.49■□□□□ 0.87
NME3-203ENST00000563367 RNF24Q9Y225 148 aa20.49■□□□□ 0.87
NME3-203ENST00000563367 SNRPCP09234 159 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms