RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 MPC2O95563 127 aa13.67□□□□□ -0.22
CDH11-206ENST00000562998 OR5G3P0C626 314 aa13.67□□□□□ -0.22
CDH11-206ENST00000562998 CXCL3P19876 107 aa13.67□□□□□ -0.22
CDH11-206ENST00000562998 GALR1P47211 349 aa13.67□□□□□ -0.22
CDH11-206ENST00000562998 CAMLGP49069 296 aa13.67□□□□□ -0.22
CDH11-206ENST00000562998 MEOX2P50222 304 aa13.67□□□□□ -0.22
CDH11-206ENST00000562998 TMEM37Q8WXS4 190 aa13.67□□□□□ -0.22
CDH11-206ENST00000562998 SLC25A31Q9H0C2 315 aa13.67□□□□□ -0.22
CDH11-206ENST00000562998 ARV1Q9H2C2 271 aa13.67□□□□□ -0.22
CDH11-206ENST00000562998 MRPS12O15235 138 aaKnown RBP13.66□□□□□ -0.22
CDH11-206ENST00000562998 RPL29P47914 159 aaKnown RBP13.66□□□□□ -0.22
CDH11-206ENST00000562998 OPCMLQ14982 345 aa13.66□□□□□ -0.22
CDH11-206ENST00000562998 ACTL10Q5JWF8 245 aa13.66□□□□□ -0.22
CDH11-206ENST00000562998 SAMD13Q5VXD3 122 aa13.66□□□□□ -0.22
CDH11-206ENST00000562998 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.66□□□□□ -0.22
CDH11-206ENST00000562998 GATAD1Q8WUU5 269 aa13.66□□□□□ -0.22
CDH11-206ENST00000562998 RSG1Q9BU20 258 aa13.66□□□□□ -0.22
CDH11-206ENST00000562998 STARD9Q9P2P6 4700 aa13.65□□□□□ -0.22
CDH11-206ENST00000562998 ELOA3CA0A087WX78 387 aaPredicted RBP13.65□□□□□ -0.22
CDH11-206ENST00000562998 UBE2L5PA0A1B0GUS4 154 aa13.65□□□□□ -0.22
CDH11-206ENST00000562998 H3BMM0 161 aa13.65□□□□□ -0.22
CDH11-206ENST00000562998 SPP1P10451 314 aa13.65□□□□□ -0.22
CDH11-206ENST00000562998 LYL1P12980 280 aa13.65□□□□□ -0.22
CDH11-206ENST00000562998 RPL7P18124 248 aaKnown RBP13.65□□□□□ -0.22
CDH11-206ENST00000562998 ID1P41134 155 aa13.65□□□□□ -0.22
CDH11-206ENST00000562998 BAXQ07812 192 aa13.65□□□□□ -0.22
CDH11-206ENST00000562998 RAB31Q13636 194 aa13.65□□□□□ -0.22
CDH11-206ENST00000562998 MORN3Q6PF18 240 aaPredicted RBP13.65□□□□□ -0.22
CDH11-206ENST00000562998 OR5C1Q8NGR4 320 aa13.65□□□□□ -0.22
CDH11-206ENST00000562998 A0A087X0K7 114 aa13.64□□□□□ -0.23
CDH11-206ENST00000562998 MPDU1O75352 247 aa13.64□□□□□ -0.23
CDH11-206ENST00000562998 CA1P00915 261 aaPredicted RBP13.64□□□□□ -0.23
CDH11-206ENST00000562998 HLA-DRB4P13762 266 aa13.64□□□□□ -0.23
CDH11-206ENST00000562998 C4BPBP20851 252 aa13.64□□□□□ -0.23
CDH11-206ENST00000562998 CASC10Q5T4H9 136 aa13.64□□□□□ -0.23
CDH11-206ENST00000562998 GDF5OSQ5U4N7 250 aa13.64□□□□□ -0.23
CDH11-206ENST00000562998 MORN5Q5VZ52 161 aa13.64□□□□□ -0.23
CDH11-206ENST00000562998 MIC13Q5XKP0 118 aa13.64□□□□□ -0.23
CDH11-206ENST00000562998 S100A7AQ86SG5 101 aa13.64□□□□□ -0.23
CDH11-206ENST00000562998 OR11H7Q8NGC8 314 aa13.64□□□□□ -0.23
CDH11-206ENST00000562998 C20orf173Q96LM9 149 aa13.64□□□□□ -0.23
CDH11-206ENST00000562998 CLUHP3Q96NS8 147 aa13.64□□□□□ -0.23
CDH11-206ENST00000562998 SAV1Q9H4B6 383 aaPredicted RBP13.64□□□□□ -0.23
CDH11-206ENST00000562998 HLA-DRB4X5D2U9 266 aa13.64□□□□□ -0.23
CDH11-206ENST00000562998 TRAV8-2A0A0B4J237 113 aa13.63□□□□□ -0.23
CDH11-206ENST00000562998 PET100P0DJ07 73 aa13.63□□□□□ -0.23
CDH11-206ENST00000562998 DEFB1P60022 68 aa13.63□□□□□ -0.23
CDH11-206ENST00000562998 TMEM41BQ5BJD5 291 aa13.63□□□□□ -0.23
CDH11-206ENST00000562998 FOXI2Q6ZQN5 318 aa13.63□□□□□ -0.23
CDH11-206ENST00000562998 LINC00305Q7Z4B0 112 aa13.63□□□□□ -0.23
CDH11-206ENST00000562998 CSNK1G2-AS1Q8NCQ2 148 aa13.63□□□□□ -0.23
CDH11-206ENST00000562998 RNF24Q9Y225 148 aa13.63□□□□□ -0.23
CDH11-206ENST00000562998 FGF7P21781 194 aa13.62□□□□□ -0.23
CDH11-206ENST00000562998 OXA1LQ15070 435 aa13.62□□□□□ -0.23
CDH11-206ENST00000562998 FCN2Q15485 313 aa13.62□□□□□ -0.23
CDH11-206ENST00000562998 NPCDR1Q9BY65 106 aa13.62□□□□□ -0.23
CDH11-206ENST00000562998 DNAJC4Q9NNZ3 241 aa13.62□□□□□ -0.23
CDH11-206ENST00000562998 SLC39A9Q9NUM3 307 aa13.62□□□□□ -0.23
CDH11-206ENST00000562998 COX7A2P2O60397 106 aa13.61□□□□□ -0.23
CDH11-206ENST00000562998 ATF4P18848 351 aaPredicted RBP13.61□□□□□ -0.23
CDH11-206ENST00000562998 RGS21Q2M5E4 152 aa13.61□□□□□ -0.23
CDH11-206ENST00000562998 C10orf113Q5VZT2 155 aa13.61□□□□□ -0.23
CDH11-206ENST00000562998 Q6ZRG5 221 aa13.61□□□□□ -0.23
CDH11-206ENST00000562998 C16orf92Q96LL3 132 aa13.61□□□□□ -0.23
CDH11-206ENST00000562998 LINC00052Q96N35 136 aa13.61□□□□□ -0.23
CDH11-206ENST00000562998 MBD2Q9UBB5 411 aa13.61□□□□□ -0.23
CDH11-206ENST00000562998 HSPB11Q9Y547 144 aa13.61□□□□□ -0.23
CDH11-206ENST00000562998 PXMP4Q9Y6I8 212 aa13.61□□□□□ -0.23
CDH11-206ENST00000562998 A8MTW9 85 aa13.6□□□□□ -0.23
CDH11-206ENST00000562998 B2MP61769 119 aa13.6□□□□□ -0.23
CDH11-206ENST00000562998 SPATA31B1PQ5VZV4 182 aa13.6□□□□□ -0.23
CDH11-206ENST00000562998 RARRES2Q99969 163 aa13.6□□□□□ -0.23
CDH11-206ENST00000562998 WDR61Q9GZS3 305 aaKnown RBP13.6□□□□□ -0.23
CDH11-206ENST00000562998 MED28Q9H204 178 aa13.6□□□□□ -0.23
CDH11-206ENST00000562998 A0A0J9YWU9 116 aa13.59□□□□□ -0.23
CDH11-206ENST00000562998 A0A0J9YX75 114 aa13.59□□□□□ -0.23
CDH11-206ENST00000562998 RPL12P30050 165 aaKnown RBP13.59□□□□□ -0.23
CDH11-206ENST00000562998 CLINT1Q14677 625 aa13.59□□□□□ -0.23
CDH11-206ENST00000562998 OR1L4Q8NGR5 311 aa13.59□□□□□ -0.23
CDH11-206ENST00000562998 OR11H2Q8NH07 326 aa13.59□□□□□ -0.23
CDH11-206ENST00000562998 THAP6Q8TBB0 222 aa13.59□□□□□ -0.23
CDH11-206ENST00000562998 PFDN5Q99471 154 aa13.59□□□□□ -0.23
CDH11-206ENST00000562998 RPRMQ9NS64 109 aa13.59□□□□□ -0.23
CDH11-206ENST00000562998 ZNF705EA8MWA4 302 aaPredicted RBP13.58□□□□□ -0.24
CDH11-206ENST00000562998 F6UB75 175 aa13.58□□□□□ -0.24
CDH11-206ENST00000562998 IGLC2P0DOY2 106 aa13.58□□□□□ -0.24
CDH11-206ENST00000562998 CXCL2P19875 107 aa13.58□□□□□ -0.24
CDH11-206ENST00000562998 IGFL4Q6B9Z1 124 aa13.58□□□□□ -0.24
CDH11-206ENST00000562998 BPIFA4PQ86YQ2 179 aa13.58□□□□□ -0.24
CDH11-206ENST00000562998 ZNF709Q8N972 641 aa13.58□□□□□ -0.24
CDH11-206ENST00000562998 ATP5SQ99766 215 aa13.58□□□□□ -0.24
CDH11-206ENST00000562998 IL17DQ8TAD2 202 aa13.57□□□□□ -0.24
CDH11-206ENST00000562998 C11orf68Q9H3H3 251 aaKnown RBP13.57□□□□□ -0.24
CDH11-206ENST00000562998 TENM2Q9NT68 2774 aa13.56□□□□□ -0.24
CDH11-206ENST00000562998 TRAV5A0A0B4J249 113 aa13.56□□□□□ -0.24
CDH11-206ENST00000562998 GIPP09681 153 aaPredicted RBP13.56□□□□□ -0.24
CDH11-206ENST00000562998 NUTF2P61970 127 aaKnown RBP13.56□□□□□ -0.24
CDH11-206ENST00000562998 GCSAMLQ5JQS6 135 aa13.56□□□□□ -0.24
CDH11-206ENST00000562998 FAM78BQ5VT40 261 aa13.56□□□□□ -0.24
CDH11-206ENST00000562998 ZFAND6Q6FIF0 208 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms