RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 RPRMQ9NS64 109 aa11.28□□□□□ -0.6
SF3B3-203ENST00000562874 RCL1Q9Y2P8 373 aaKnown RBP11.28□□□□□ -0.6
SF3B3-203ENST00000562874 CENPXA8MT69 81 aa11.27□□□□□ -0.61
SF3B3-203ENST00000562874 PSG9Q00887 426 aa11.27□□□□□ -0.61
SF3B3-203ENST00000562874 SLC38A11Q08AI6 406 aa11.27□□□□□ -0.61
SF3B3-203ENST00000562874 ZBTB8BQ8NAP8 495 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-203ENST00000562874 SLC25A39Q9BZJ4 359 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-203ENST00000562874 SLC45A2Q9UMX9 530 aa11.27□□□□□ -0.61
SF3B3-203ENST00000562874 TRAV8-2A0A0B4J237 113 aa11.26□□□□□ -0.61
SF3B3-203ENST00000562874 AMBPP02760 352 aa11.26□□□□□ -0.61
SF3B3-203ENST00000562874 OR5G3P0C626 314 aa11.26□□□□□ -0.61
SF3B3-203ENST00000562874 TMEM14EPQ6UXP3 125 aa11.26□□□□□ -0.61
SF3B3-203ENST00000562874 C1orf158Q8N1D5 194 aa11.26□□□□□ -0.61
SF3B3-203ENST00000562874 SMIM8Q96KF7 97 aa11.26□□□□□ -0.61
SF3B3-203ENST00000562874 NEU1Q99519 415 aa11.26□□□□□ -0.61
SF3B3-203ENST00000562874 C7orf50Q9BRJ6 194 aaKnown RBP11.26□□□□□ -0.61
SF3B3-203ENST00000562874 GSKIPQ9P0R6 139 aa11.26□□□□□ -0.61
SF3B3-203ENST00000562874 HIGD1AQ9Y241 93 aa11.26□□□□□ -0.61
SF3B3-203ENST00000562874 TRAV6A0A075B6T7 132 aa11.25□□□□□ -0.61
SF3B3-203ENST00000562874 M0R2Z0 102 aa11.25□□□□□ -0.61
SF3B3-203ENST00000562874 PLA2G10O15496 165 aa11.25□□□□□ -0.61
SF3B3-203ENST00000562874 RAP2BP61225 183 aa11.25□□□□□ -0.61
SF3B3-203ENST00000562874 DLK1P80370 383 aa11.25□□□□□ -0.61
SF3B3-203ENST00000562874 SPINK13Q1W4C9 94 aa11.25□□□□□ -0.61
SF3B3-203ENST00000562874 FAM222AQ5U5X8 452 aa11.25□□□□□ -0.61
SF3B3-203ENST00000562874 SAMD13Q5VXD3 122 aa11.25□□□□□ -0.61
SF3B3-203ENST00000562874 MITD1Q8WV92 249 aa11.25□□□□□ -0.61
SF3B3-203ENST00000562874 CLUHP3Q96NS8 147 aa11.25□□□□□ -0.61
SF3B3-203ENST00000562874 SHANK2-AS3Q9BTD1 123 aa11.25□□□□□ -0.61
SF3B3-203ENST00000562874 RNF126Q9BV68 326 aa11.25□□□□□ -0.61
SF3B3-203ENST00000562874 PLA2G2EQ9NZK7 142 aa11.25□□□□□ -0.61
SF3B3-203ENST00000562874 GOLT1BQ9Y3E0 138 aa11.25□□□□□ -0.61
SF3B3-203ENST00000562874 RFNGQ9Y644 331 aa11.25□□□□□ -0.61
SF3B3-203ENST00000562874 LYRM1O43325 122 aa11.24□□□□□ -0.61
SF3B3-203ENST00000562874 CNN1P51911 297 aaKnown RBP11.24□□□□□ -0.61
SF3B3-203ENST00000562874 ARL16Q0P5N6 197 aa11.24□□□□□ -0.61
SF3B3-203ENST00000562874 SPATA31B1PQ5VZV4 182 aa11.24□□□□□ -0.61
SF3B3-203ENST00000562874 AMTNQ6UX39 209 aa11.24□□□□□ -0.61
SF3B3-203ENST00000562874 ZNF738Q8NE65 137 aa11.24□□□□□ -0.61
SF3B3-203ENST00000562874 GPR82Q96P67 336 aa11.24□□□□□ -0.61
SF3B3-203ENST00000562874 SEC22CQ9BRL7 303 aa11.24□□□□□ -0.61
SF3B3-203ENST00000562874 ARL6Q9H0F7 186 aa11.24□□□□□ -0.61
SF3B3-203ENST00000562874 MGAT4CQ9UBM8 478 aa11.24□□□□□ -0.61
SF3B3-203ENST00000562874 LOC102723971A0A1B0GUV8 181 aa11.23□□□□□ -0.61
SF3B3-203ENST00000562874 A8MTW9 85 aa11.23□□□□□ -0.61
SF3B3-203ENST00000562874 HYPMO75409 117 aa11.23□□□□□ -0.61
SF3B3-203ENST00000562874 HBE1P02100 147 aa11.23□□□□□ -0.61
SF3B3-203ENST00000562874 MBPP02686 304 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-203ENST00000562874 PRM2P04554 102 aa11.23□□□□□ -0.61
SF3B3-203ENST00000562874 SNRPCP09234 159 aaKnown RBP11.23□□□□□ -0.61
SF3B3-203ENST00000562874 SPART-AS1P0CW21 52 aa11.23□□□□□ -0.61
SF3B3-203ENST00000562874 HTN3P15516 51 aa11.23□□□□□ -0.61
SF3B3-203ENST00000562874 BAP18Q8IXM2 172 aa11.23□□□□□ -0.61
SF3B3-203ENST00000562874 OR11H7Q8NGC8 314 aa11.23□□□□□ -0.61
SF3B3-203ENST00000562874 OR10P1Q8NGE3 313 aa11.23□□□□□ -0.61
SF3B3-203ENST00000562874 DKK2Q9UBU2 259 aa11.23□□□□□ -0.61
SF3B3-203ENST00000562874 LSM5Q9Y4Y9 91 aaKnown RBP11.23□□□□□ -0.61
SF3B3-203ENST00000562874 YTHDF2Q9Y5A9 579 aaKnown RBP11.23□□□□□ -0.61
SF3B3-203ENST00000562874 TMEM189A5PLL7 270 aa11.22□□□□□ -0.61
SF3B3-203ENST00000562874 SMIM9A6NGZ8 99 aa11.22□□□□□ -0.61
SF3B3-203ENST00000562874 FAM25EA8MYX2 175 aa11.22□□□□□ -0.61
SF3B3-203ENST00000562874 TSC22D2O75157 780 aa11.22□□□□□ -0.61
SF3B3-203ENST00000562874 PATE2Q6UY27 113 aa11.22□□□□□ -0.61
SF3B3-203ENST00000562874 TMEM208Q9BTX3 173 aa11.22□□□□□ -0.61
SF3B3-203ENST00000562874 NDUFAF3Q9BU61 184 aa11.22□□□□□ -0.61
SF3B3-203ENST00000562874 ARV1Q9H2C2 271 aa11.22□□□□□ -0.61
SF3B3-203ENST00000562874 NUDT15Q9NV35 164 aa11.22□□□□□ -0.61
SF3B3-203ENST00000562874 TRAV12-2A0A075B6T6 113 aa11.21□□□□□ -0.61
SF3B3-203ENST00000562874 C7orf66A4D0T2 115 aa11.21□□□□□ -0.61
SF3B3-203ENST00000562874 TCRBP04435 133 aa11.21□□□□□ -0.61
SF3B3-203ENST00000562874 RPL7P18124 248 aaKnown RBP11.21□□□□□ -0.61
SF3B3-203ENST00000562874 S100A7P31151 101 aa11.21□□□□□ -0.61
SF3B3-203ENST00000562874 PLP1P60201 277 aa11.21□□□□□ -0.61
SF3B3-203ENST00000562874 SELENOTP62341 195 aa11.21□□□□□ -0.61
SF3B3-203ENST00000562874 HIST1H1AQ02539 215 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-203ENST00000562874 RRN3P1Q2M238 152 aa11.21□□□□□ -0.61
SF3B3-203ENST00000562874 TEPPQ6URK8 271 aa11.21□□□□□ -0.61
SF3B3-203ENST00000562874 IGF2BP2-AS1Q96M15 143 aa11.21□□□□□ -0.61
SF3B3-203ENST00000562874 NIPSNAP3BQ9BS92 247 aa11.21□□□□□ -0.61
SF3B3-203ENST00000562874 NPVFQ9HCQ7 196 aa11.21□□□□□ -0.61
SF3B3-203ENST00000562874 K7EPK0 472 aa11.2□□□□□ -0.62
SF3B3-203ENST00000562874 L7N2F9 121 aa11.2□□□□□ -0.62
SF3B3-203ENST00000562874 AGPAT2O15120 278 aa11.2□□□□□ -0.62
SF3B3-203ENST00000562874 CRXO43186 299 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-203ENST00000562874 INSP01308 110 aa11.2□□□□□ -0.62
SF3B3-203ENST00000562874 VAMP2P63027 116 aa11.2□□□□□ -0.62
SF3B3-203ENST00000562874 ZNF846Q147U1 533 aa11.2□□□□□ -0.62
SF3B3-203ENST00000562874 MGST2Q99735 147 aa11.2□□□□□ -0.62
SF3B3-203ENST00000562874 A0A087X0K7 114 aa11.19□□□□□ -0.62
SF3B3-203ENST00000562874 ZNF705GA8MUZ8 300 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-203ENST00000562874 FNDC10F2Z333 226 aa11.19□□□□□ -0.62
SF3B3-203ENST00000562874 H3BTX0 84 aa11.19□□□□□ -0.62
SF3B3-203ENST00000562874 BOLA2-SMG1P6H3BVE0 249 aa11.19□□□□□ -0.62
SF3B3-203ENST00000562874 GOSR2O14653 212 aa11.19□□□□□ -0.62
SF3B3-203ENST00000562874 MRPS12O15235 138 aaKnown RBP11.19□□□□□ -0.62
SF3B3-203ENST00000562874 DUSP14O95147 198 aaKnown RBP11.19□□□□□ -0.62
SF3B3-203ENST00000562874 CXCL3P19876 107 aa11.19□□□□□ -0.62
SF3B3-203ENST00000562874 BCAP31P51572 246 aa11.19□□□□□ -0.62
SF3B3-203ENST00000562874 TAS2R30P59541 319 aa11.19□□□□□ -0.62
SF3B3-203ENST00000562874 MORN5Q5VZ52 161 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms