RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 NPCDR1Q9BY65 106 aa17.28■□□□□ 0.36
SMPD3-202ENST00000561749 SLC39A9Q9NUM3 307 aa17.28■□□□□ 0.36
SMPD3-202ENST00000561749 PXMP4Q9Y6I8 212 aa17.28■□□□□ 0.36
SMPD3-202ENST00000561749 C10orf113Q5VZT2 155 aa17.27■□□□□ 0.36
SMPD3-202ENST00000561749 Q6ZRG5 221 aa17.27■□□□□ 0.36
SMPD3-202ENST00000561749 LINC00305Q7Z4B0 112 aa17.27■□□□□ 0.36
SMPD3-202ENST00000561749 MPDU1O75352 247 aa17.26■□□□□ 0.35
SMPD3-202ENST00000561749 SNRPD3P62318 126 aaKnown RBP17.26■□□□□ 0.35
SMPD3-202ENST00000561749 MORN5Q5VZ52 161 aa17.26■□□□□ 0.35
SMPD3-202ENST00000561749 C17orf77Q96MU5 243 aa17.26■□□□□ 0.35
SMPD3-202ENST00000561749 GPR82Q96P67 336 aa17.26■□□□□ 0.35
SMPD3-202ENST00000561749 WDR61Q9GZS3 305 aaKnown RBP17.26■□□□□ 0.35
SMPD3-202ENST00000561749 SOCS3O14543 225 aa17.25■□□□□ 0.35
SMPD3-202ENST00000561749 APOC4P55056 127 aa17.25■□□□□ 0.35
SMPD3-202ENST00000561749 FGL1Q08830 312 aa17.25■□□□□ 0.35
SMPD3-202ENST00000561749 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.25■□□□□ 0.35
SMPD3-202ENST00000561749 S100A7AQ86SG5 101 aa17.25■□□□□ 0.35
SMPD3-202ENST00000561749 CHAC2Q8WUX2 184 aa17.25■□□□□ 0.35
SMPD3-202ENST00000561749 ASB13Q8WXK3 278 aa17.25■□□□□ 0.35
SMPD3-202ENST00000561749 LINC00052Q96N35 136 aa17.25■□□□□ 0.35
SMPD3-202ENST00000561749 WFDC1Q9HC57 220 aa17.25■□□□□ 0.35
SMPD3-202ENST00000561749 DNAJC4Q9NNZ3 241 aa17.25■□□□□ 0.35
SMPD3-202ENST00000561749 RPL7P18124 248 aaKnown RBP17.24■□□□□ 0.35
SMPD3-202ENST00000561749 ATF4P18848 351 aaPredicted RBP17.24■□□□□ 0.35
SMPD3-202ENST00000561749 DEFB1P60022 68 aa17.24■□□□□ 0.35
SMPD3-202ENST00000561749 ACTL10Q5JWF8 245 aa17.24■□□□□ 0.35
SMPD3-202ENST00000561749 OR1L4Q8NGR5 311 aa17.24■□□□□ 0.35
SMPD3-202ENST00000561749 OR2T35Q8NGX2 323 aa17.24■□□□□ 0.35
SMPD3-202ENST00000561749 ELOA3CA0A087WX78 387 aaPredicted RBP17.23■□□□□ 0.35
SMPD3-202ENST00000561749 ID1P41134 155 aa17.23■□□□□ 0.35
SMPD3-202ENST00000561749 GCSAMLQ5JQS6 135 aa17.23■□□□□ 0.35
SMPD3-202ENST00000561749 STHQ8IWL8 128 aa17.23■□□□□ 0.35
SMPD3-202ENST00000561749 C16orf92Q96LL3 132 aa17.23■□□□□ 0.35
SMPD3-202ENST00000561749 FXYD6-FXYD2A0A087WZ82 144 aa17.22■□□□□ 0.35
SMPD3-202ENST00000561749 TRAV5A0A0B4J249 113 aa17.22■□□□□ 0.35
SMPD3-202ENST00000561749 IFNA5P01569 189 aa17.22■□□□□ 0.35
SMPD3-202ENST00000561749 SNRPCP09234 159 aaKnown RBP17.22■□□□□ 0.35
SMPD3-202ENST00000561749 PSMB3P49720 205 aa17.22■□□□□ 0.35
SMPD3-202ENST00000561749 ZNF709Q8N972 641 aa17.22■□□□□ 0.35
SMPD3-202ENST00000561749 SEPSECSQ9HD40 501 aaKnown RBP17.22■□□□□ 0.35
SMPD3-202ENST00000561749 MEOX2P50222 304 aa17.21■□□□□ 0.35
SMPD3-202ENST00000561749 DEFB135Q30KP9 77 aa17.21■□□□□ 0.35
SMPD3-202ENST00000561749 IGFL4Q6B9Z1 124 aa17.21■□□□□ 0.35
SMPD3-202ENST00000561749 SCGB1C1Q8TD33 95 aa17.21■□□□□ 0.35
SMPD3-202ENST00000561749 C20orf173Q96LM9 149 aa17.21■□□□□ 0.35
SMPD3-202ENST00000561749 PFDN5Q99471 154 aa17.21■□□□□ 0.35
SMPD3-202ENST00000561749 HUWE1Q7Z6Z7 4374 aaKnown RBP17.21■□□□□ 0.34
SMPD3-202ENST00000561749 TENM3Q9P273 2699 aa17.2■□□□□ 0.34
SMPD3-202ENST00000561749 KIR2DL5BA0A0G2JN68 375 aa17.2■□□□□ 0.34
SMPD3-202ENST00000561749 KIR2DL5BA0A0G2JPC4 375 aa17.2■□□□□ 0.34
SMPD3-202ENST00000561749 SMLR1H3BR10 107 aa17.2■□□□□ 0.34
SMPD3-202ENST00000561749 ISLRO14498 428 aa17.2■□□□□ 0.34
SMPD3-202ENST00000561749 MRPS12O15235 138 aaKnown RBP17.2■□□□□ 0.34
SMPD3-202ENST00000561749 TRPT1Q86TN4 253 aaKnown RBP17.2■□□□□ 0.34
SMPD3-202ENST00000561749 KIR2DL5AQ8N109 375 aa17.2■□□□□ 0.34
SMPD3-202ENST00000561749 KIR2DL5BQ8NHK3 375 aa17.2■□□□□ 0.34
SMPD3-202ENST00000561749 AQP10Q96PS8 301 aa17.2■□□□□ 0.34
SMPD3-202ENST00000561749 RFNGQ9Y644 331 aa17.2■□□□□ 0.34
SMPD3-202ENST00000561749 C17orf112F2Z3M2 114 aa17.19■□□□□ 0.34
SMPD3-202ENST00000561749 G3V3Q6 166 aa17.19■□□□□ 0.34
SMPD3-202ENST00000561749 CSTL1Q9H114 145 aa17.19■□□□□ 0.34
SMPD3-202ENST00000561749 RNF24Q9Y225 148 aa17.19■□□□□ 0.34
SMPD3-202ENST00000561749 H3BTX0 84 aa17.18■□□□□ 0.34
SMPD3-202ENST00000561749 GDF5OSQ5U4N7 250 aa17.18■□□□□ 0.34
SMPD3-202ENST00000561749 BPIFA4PQ86YQ2 179 aa17.18■□□□□ 0.34
SMPD3-202ENST00000561749 RNF182Q8N6D2 247 aa17.18■□□□□ 0.34
SMPD3-202ENST00000561749 GATAD1Q8WUU5 269 aa17.18■□□□□ 0.34
SMPD3-202ENST00000561749 OVOL2Q9BRP0 275 aa17.18■□□□□ 0.34
SMPD3-202ENST00000561749 KCNIP2Q9NS61 270 aa17.18■□□□□ 0.34
SMPD3-202ENST00000561749 A0A087X0K7 114 aa17.17■□□□□ 0.34
SMPD3-202ENST00000561749 TRAV8-2A0A0B4J237 113 aa17.17■□□□□ 0.34
SMPD3-202ENST00000561749 UBE2CO00762 179 aa17.17■□□□□ 0.34
SMPD3-202ENST00000561749 CA1P00915 261 aaPredicted RBP17.17■□□□□ 0.34
SMPD3-202ENST00000561749 SAMD13Q5VXD3 122 aa17.17■□□□□ 0.34
SMPD3-202ENST00000561749 SPATA31B1PQ5VZV4 182 aa17.17■□□□□ 0.34
SMPD3-202ENST00000561749 F6UB75 175 aa17.16■□□□□ 0.34
SMPD3-202ENST00000561749 HLA-DMBP28068 263 aa17.16■□□□□ 0.34
SMPD3-202ENST00000561749 FFAR4Q5NUL3 377 aa17.16■□□□□ 0.34
SMPD3-202ENST00000561749 FAM78BQ5VT40 261 aa17.16■□□□□ 0.34
SMPD3-202ENST00000561749 INO80EQ8NBZ0 244 aaPredicted RBP17.16■□□□□ 0.34
SMPD3-202ENST00000561749 LRRC20Q8TCA0 184 aa17.16■□□□□ 0.34
SMPD3-202ENST00000561749 WWC2-AS2Q96NR7 200 aa17.16■□□□□ 0.34
SMPD3-202ENST00000561749 TNFSF18Q9UNG2 199 aa17.16■□□□□ 0.34
SMPD3-202ENST00000561749 RNF222A6NCQ9 220 aa17.15■□□□□ 0.34
SMPD3-202ENST00000561749 H3BMM0 161 aa17.15■□□□□ 0.34
SMPD3-202ENST00000561749 IGKV3-20P01619 116 aa17.15■□□□□ 0.34
SMPD3-202ENST00000561749 PRB4P10163 310 aaPredicted RBP17.15■□□□□ 0.34
SMPD3-202ENST00000561749 Q6ZWC4 215 aa17.15■□□□□ 0.34
SMPD3-202ENST00000561749 MIR17HGQ75NE6 70 aa17.15■□□□□ 0.34
SMPD3-202ENST00000561749 PARD6GQ9BYG4 376 aaPredicted RBP17.15■□□□□ 0.34
SMPD3-202ENST00000561749 SPRY2O43597 315 aa17.14■□□□□ 0.33
SMPD3-202ENST00000561749 HLA-DRB4P13762 266 aa17.14■□□□□ 0.33
SMPD3-202ENST00000561749 C4BPBP20851 252 aa17.14■□□□□ 0.33
SMPD3-202ENST00000561749 FOXI2Q6ZQN5 318 aa17.14■□□□□ 0.33
SMPD3-202ENST00000561749 SAV1Q9H4B6 383 aaPredicted RBP17.14■□□□□ 0.33
SMPD3-202ENST00000561749 RPRMQ9NS64 109 aa17.14■□□□□ 0.33
SMPD3-202ENST00000561749 HLA-DRB4X5D2U9 266 aa17.14■□□□□ 0.33
SMPD3-202ENST00000561749 H3BQ15 152 aa17.13■□□□□ 0.33
SMPD3-202ENST00000561749 IGLC2P0DOY2 106 aa17.13■□□□□ 0.33
SMPD3-202ENST00000561749 HSD17B11Q8NBQ5 300 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms