RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 PATE2Q6UY27 113 aa11.24□□□□□ -0.61
CCDC113-203ENST00000561517 C1QTNF4Q9BXJ3 329 aa11.24□□□□□ -0.61
CCDC113-203ENST00000561517 LYRM2Q9NU23 88 aaPredicted RBP11.24□□□□□ -0.61
CCDC113-203ENST00000561517 X6R8D5 127 aa11.24□□□□□ -0.61
CCDC113-203ENST00000561517 INMT-MINDY4F8WBC2 141 aa11.23□□□□□ -0.61
CCDC113-203ENST00000561517 AGPAT2O15120 278 aa11.23□□□□□ -0.61
CCDC113-203ENST00000561517 OR5G3P0C626 314 aa11.23□□□□□ -0.61
CCDC113-203ENST00000561517 MIFP14174 115 aa11.23□□□□□ -0.61
CCDC113-203ENST00000561517 S100A10P60903 97 aa11.23□□□□□ -0.61
CCDC113-203ENST00000561517 SPATA31B1PQ5VZV4 182 aa11.23□□□□□ -0.61
CCDC113-203ENST00000561517 CEMP1Q6PRD7 247 aaPredicted RBP11.23□□□□□ -0.61
CCDC113-203ENST00000561517 S100A7AQ86SG5 101 aa11.23□□□□□ -0.61
CCDC113-203ENST00000561517 ZNF546Q86UE3 836 aa11.23□□□□□ -0.61
CCDC113-203ENST00000561517 C16orf92Q96LL3 132 aa11.23□□□□□ -0.61
CCDC113-203ENST00000561517 C20orf173Q96LM9 149 aa11.23□□□□□ -0.61
CCDC113-203ENST00000561517 MGST2Q99735 147 aa11.23□□□□□ -0.61
CCDC113-203ENST00000561517 MARVELD1Q9BSK0 173 aa11.23□□□□□ -0.61
CCDC113-203ENST00000561517 ARL6Q9H0F7 186 aa11.23□□□□□ -0.61
CCDC113-203ENST00000561517 CLEC5AQ9NY25 188 aa11.23□□□□□ -0.61
CCDC113-203ENST00000561517 GOSR2O14653 212 aa11.22□□□□□ -0.61
CCDC113-203ENST00000561517 JTBO76095 146 aa11.22□□□□□ -0.61
CCDC113-203ENST00000561517 CST7O76096 145 aa11.22□□□□□ -0.61
CCDC113-203ENST00000561517 RPL7P18124 248 aaKnown RBP11.22□□□□□ -0.61
CCDC113-203ENST00000561517 SULT1A1P50225 295 aa11.22□□□□□ -0.61
CCDC113-203ENST00000561517 VWC2Q2TAL6 325 aa11.22□□□□□ -0.61
CCDC113-203ENST00000561517 TMEM252Q8N6L7 170 aa11.22□□□□□ -0.61
CCDC113-203ENST00000561517 UHRF2Q96PU4 802 aa11.22□□□□□ -0.61
CCDC113-203ENST00000561517 ARV1Q9H2C2 271 aa11.22□□□□□ -0.61
CCDC113-203ENST00000561517 RPRMQ9NS64 109 aa11.22□□□□□ -0.61
CCDC113-203ENST00000561517 XCL2Q9UBD3 114 aa11.22□□□□□ -0.61
CCDC113-203ENST00000561517 IGHV4-28A0A0C4DH34 117 aa11.21□□□□□ -0.61
CCDC113-203ENST00000561517 A0A0J9YX75 114 aa11.21□□□□□ -0.61
CCDC113-203ENST00000561517 IGSF23A1L1A6 192 aa11.21□□□□□ -0.61
CCDC113-203ENST00000561517 DEFB4AO15263 64 aa11.21□□□□□ -0.61
CCDC113-203ENST00000561517 RBMY1A1P0DJD3 496 aaKnown RBP11.21□□□□□ -0.61
CCDC113-203ENST00000561517 RBMY1CP0DJD4 496 aa11.21□□□□□ -0.61
CCDC113-203ENST00000561517 DEFA1P59665 94 aa11.21□□□□□ -0.61
CCDC113-203ENST00000561517 DEFA3P59666 94 aa11.21□□□□□ -0.61
CCDC113-203ENST00000561517 RBMY1FQ15415 496 aaKnown RBP11.21□□□□□ -0.61
CCDC113-203ENST00000561517 C11orf45Q8TAV5 145 aa11.21□□□□□ -0.61
CCDC113-203ENST00000561517 MFFQ9GZY8 342 aa11.21□□□□□ -0.61
CCDC113-203ENST00000561517 UQCC1Q9NVA1 299 aa11.21□□□□□ -0.61
CCDC113-203ENST00000561517 RNF24Q9Y225 148 aa11.21□□□□□ -0.61
CCDC113-203ENST00000561517 WDR83OSQ9Y284 106 aa11.21□□□□□ -0.61
CCDC113-203ENST00000561517 A0A087X0K7 114 aa11.2□□□□□ -0.62
CCDC113-203ENST00000561517 TRAV8-2A0A0B4J237 113 aa11.2□□□□□ -0.62
CCDC113-203ENST00000561517 A8MTW9 85 aa11.2□□□□□ -0.62
CCDC113-203ENST00000561517 F6UB75 175 aa11.2□□□□□ -0.62
CCDC113-203ENST00000561517 MRPS12O15235 138 aaKnown RBP11.2□□□□□ -0.62
CCDC113-203ENST00000561517 SIX6O95475 246 aa11.2□□□□□ -0.62
CCDC113-203ENST00000561517 S100A11P31949 105 aa11.2□□□□□ -0.62
CCDC113-203ENST00000561517 CAMLGP49069 296 aa11.2□□□□□ -0.62
CCDC113-203ENST00000561517 RAB31Q13636 194 aa11.2□□□□□ -0.62
CCDC113-203ENST00000561517 EBLN2Q6P2I7 272 aa11.2□□□□□ -0.62
CCDC113-203ENST00000561517 ZNF709Q8N972 641 aa11.2□□□□□ -0.62
CCDC113-203ENST00000561517 PHLDA1Q8WV24 401 aaPredicted RBP11.2□□□□□ -0.62
CCDC113-203ENST00000561517 NMES1Q9C002 83 aa11.2□□□□□ -0.62
CCDC113-203ENST00000561517 HRH4Q9H3N8 390 aa11.2□□□□□ -0.62
CCDC113-203ENST00000561517 PLECQ15149 4684 aaKnown RBP11.2□□□□□ -0.62
CCDC113-203ENST00000561517 IGKV3-20P01619 116 aa11.19□□□□□ -0.62
CCDC113-203ENST00000561517 NANOS2P60321 138 aaKnown RBP11.19□□□□□ -0.62
CCDC113-203ENST00000561517 HBG1P69891 147 aa11.19□□□□□ -0.62
CCDC113-203ENST00000561517 HBG2P69892 147 aa11.19□□□□□ -0.62
CCDC113-203ENST00000561517 FAM78BQ5VT40 261 aa11.19□□□□□ -0.62
CCDC113-203ENST00000561517 ZNF705AQ6ZN79 300 aaPredicted RBP11.19□□□□□ -0.62
CCDC113-203ENST00000561517 STX12Q86Y82 276 aa11.19□□□□□ -0.62
CCDC113-203ENST00000561517 OR4B1Q8NGF8 309 aa11.19□□□□□ -0.62
CCDC113-203ENST00000561517 CHAC2Q8WUX2 184 aa11.19□□□□□ -0.62
CCDC113-203ENST00000561517 TMEM37Q8WXS4 190 aa11.19□□□□□ -0.62
CCDC113-203ENST00000561517 KLK5Q9Y337 293 aaPredicted RBP11.19□□□□□ -0.62
CCDC113-203ENST00000561517 ALMS1Q8TCU4 4167 aa11.19□□□□□ -0.62
CCDC113-203ENST00000561517 DNAH1Q9P2D7 4330 aa11.19□□□□□ -0.62
CCDC113-203ENST00000561517 ELOA3CA0A087WX78 387 aaPredicted RBP11.18□□□□□ -0.62
CCDC113-203ENST00000561517 PRR20EP86478 221 aa11.18□□□□□ -0.62
CCDC113-203ENST00000561517 PRR20CP86479 221 aa11.18□□□□□ -0.62
CCDC113-203ENST00000561517 PRR20DP86480 221 aa11.18□□□□□ -0.62
CCDC113-203ENST00000561517 PRR20BP86481 221 aa11.18□□□□□ -0.62
CCDC113-203ENST00000561517 PRR20AP86496 221 aa11.18□□□□□ -0.62
CCDC113-203ENST00000561517 CYCSP99999 105 aaKnown RBP11.18□□□□□ -0.62
CCDC113-203ENST00000561517 PSG9Q00887 426 aa11.18□□□□□ -0.62
CCDC113-203ENST00000561517 ATP6V1FQ16864 119 aa11.18□□□□□ -0.62
CCDC113-203ENST00000561517 LINC00305Q7Z4B0 112 aa11.18□□□□□ -0.62
CCDC113-203ENST00000561517 NEU1Q99519 415 aa11.18□□□□□ -0.62
CCDC113-203ENST00000561517 ZNF705FA8MVS1 300 aaPredicted RBP11.17□□□□□ -0.62
CCDC113-203ENST00000561517 COX7A2P2O60397 106 aa11.17□□□□□ -0.62
CCDC113-203ENST00000561517 RLN2P04090 185 aa11.17□□□□□ -0.62
CCDC113-203ENST00000561517 ZNF705DP0CH99 300 aaPredicted RBP11.17□□□□□ -0.62
CCDC113-203ENST00000561517 ZNF705BP0CI00 300 aaPredicted RBP11.17□□□□□ -0.62
CCDC113-203ENST00000561517 RPL29P47914 159 aaKnown RBP11.17□□□□□ -0.62
CCDC113-203ENST00000561517 FXYD7P58549 80 aa11.17□□□□□ -0.62
CCDC113-203ENST00000561517 FGL1Q08830 312 aa11.17□□□□□ -0.62
CCDC113-203ENST00000561517 MIC13Q5XKP0 118 aa11.17□□□□□ -0.62
CCDC113-203ENST00000561517 IGFL4Q6B9Z1 124 aa11.17□□□□□ -0.62
CCDC113-203ENST00000561517 AMTNQ6UX39 209 aa11.17□□□□□ -0.62
CCDC113-203ENST00000561517 RNF182Q8N6D2 247 aa11.17□□□□□ -0.62
CCDC113-203ENST00000561517 SLC35B3Q9H1N7 401 aa11.17□□□□□ -0.62
CCDC113-203ENST00000561517 DNAJC4Q9NNZ3 241 aa11.17□□□□□ -0.62
CCDC113-203ENST00000561517 UBE2L5PA0A1B0GUS4 154 aa11.16□□□□□ -0.62
CCDC113-203ENST00000561517 E5RGE8 158 aa11.16□□□□□ -0.62
CCDC113-203ENST00000561517 H0YIZ8 118 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms