RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 PDE6DO43924 150 aa7.92□□□□□ -1.14
USP3-219ENST00000561326 OR10J4P0C629 311 aa7.92□□□□□ -1.14
USP3-219ENST00000561326 NBEAP1P0C6P0 100 aa7.92□□□□□ -1.14
USP3-219ENST00000561326 HIST1H1EP10412 219 aaKnown RBP7.92□□□□□ -1.14
USP3-219ENST00000561326 CRYBB3P26998 211 aa7.92□□□□□ -1.14
USP3-219ENST00000561326 UBE2G2P60604 165 aa7.92□□□□□ -1.14
USP3-219ENST00000561326 ICAM4Q14773 271 aa7.92□□□□□ -1.14
USP3-219ENST00000561326 LEMD1Q68G75 181 aa7.92□□□□□ -1.14
USP3-219ENST00000561326 WIPF2Q8TF74 440 aaPredicted RBP7.92□□□□□ -1.14
USP3-219ENST00000561326 ZNF503Q96F45 646 aa7.92□□□□□ -1.14
USP3-219ENST00000561326 TMEM231Q9H6L2 316 aa7.92□□□□□ -1.14
USP3-219ENST00000561326 DAZ1Q9NQZ3 744 aaKnown RBP7.92□□□□□ -1.14
USP3-219ENST00000561326 TSSC4Q9Y5U2 329 aaPredicted RBP7.92□□□□□ -1.14
USP3-219ENST00000561326 WNK1Q9H4A3 2382 aa7.92□□□□□ -1.14
USP3-219ENST00000561326 IGHV3OR16-8A0A075B7F1 116 aa7.91□□□□□ -1.14
USP3-219ENST00000561326 CYSRT1A8MQ03 144 aa7.91□□□□□ -1.14
USP3-219ENST00000561326 F6UZH7 168 aa7.91□□□□□ -1.14
USP3-219ENST00000561326 BUB3O43684 328 aa7.91□□□□□ -1.14
USP3-219ENST00000561326 PYYP10082 97 aa7.91□□□□□ -1.14
USP3-219ENST00000561326 GALR1P47211 349 aa7.91□□□□□ -1.14
USP3-219ENST00000561326 SRSF3P84103 164 aaKnown RBP7.91□□□□□ -1.14
USP3-219ENST00000561326 FOXL1Q12952 345 aa7.91□□□□□ -1.14
USP3-219ENST00000561326 TCTEX1D4Q5JR98 221 aa7.91□□□□□ -1.14
USP3-219ENST00000561326 SOHLH1Q5JUK2 328 aa7.91□□□□□ -1.14
USP3-219ENST00000561326 KLHL30-AS1Q8NEE0 82 aa7.91□□□□□ -1.14
USP3-219ENST00000561326 OR1N2Q8NGR9 330 aa7.91□□□□□ -1.14
USP3-219ENST00000561326 TMEM190Q8WZ59 177 aa7.91□□□□□ -1.14
USP3-219ENST00000561326 FXYD5Q96DB9 178 aa7.91□□□□□ -1.14
USP3-219ENST00000561326 ELOVL1Q9BW60 279 aa7.91□□□□□ -1.14
USP3-219ENST00000561326 C2CD3Q4AC94 2353 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 IGHV4OR15-8A0A075B7B6 117 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 A0A087WW49 117 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 FAM74A7A6NL05 159 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 F8W036 122 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 LINC01619G3V211 115 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 TMEM250H0YL14 139 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 LGALS9O00182 355 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 ZNF207O43670 478 aaKnown RBP7.9□□□□□ -1.14
USP3-219ENST00000561326 SRP19P09132 144 aaKnown RBP7.9□□□□□ -1.14
USP3-219ENST00000561326 SFTA3P0C7M3 94 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 CD28P10747 220 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 GP9P14770 177 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 ATF4P18848 351 aaPredicted RBP7.9□□□□□ -1.14
USP3-219ENST00000561326 MEOX2P50222 304 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 PROK1P58294 105 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 C1QL4Q86Z23 238 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 LYPD1Q8N2G4 141 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 BLNKQ8WV28 456 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 TCEAL7Q9BRU2 100 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 SEC11CQ9BY50 192 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 U3KQE9 123 aa7.9□□□□□ -1.14
USP3-219ENST00000561326 IGHV7-4-1A0A0J9YVY3 117 aa7.89□□□□□ -1.15
USP3-219ENST00000561326 ZNF785A8K8V0 405 aa7.89□□□□□ -1.15
USP3-219ENST00000561326 HOXD3P31249 432 aaPredicted RBP7.89□□□□□ -1.15
USP3-219ENST00000561326 CEBPGP53567 150 aa7.89□□□□□ -1.15
USP3-219ENST00000561326 CD81P60033 236 aa7.89□□□□□ -1.15
USP3-219ENST00000561326 RANP62826 216 aaKnown RBP7.89□□□□□ -1.15
USP3-219ENST00000561326 SUMO1P63165 101 aaKnown RBP7.89□□□□□ -1.15
USP3-219ENST00000561326 PSG9Q00887 426 aa7.89□□□□□ -1.15
USP3-219ENST00000561326 KLF5Q13887 457 aaPredicted RBP7.89□□□□□ -1.15
USP3-219ENST00000561326 PDE6HQ13956 83 aa7.89□□□□□ -1.15
USP3-219ENST00000561326 FAM74A3Q4VXF1 159 aa7.89□□□□□ -1.15
USP3-219ENST00000561326 UNQ9165/PRO28630Q6UXU0 137 aa7.89□□□□□ -1.15
USP3-219ENST00000561326 REC114Q7Z4M0 266 aa7.89□□□□□ -1.15
USP3-219ENST00000561326 OR11H1Q8NG94 326 aa7.89□□□□□ -1.15
USP3-219ENST00000561326 ZNF414Q96IQ9 312 aa7.89□□□□□ -1.15
USP3-219ENST00000561326 AAMDCQ9H7C9 122 aa7.89□□□□□ -1.15
USP3-219ENST00000561326 ZNF586Q9NXT0 402 aa7.89□□□□□ -1.15
USP3-219ENST00000561326 PEMTQ9UBM1 199 aa7.89□□□□□ -1.15
USP3-219ENST00000561326 YTHDF2Q9Y5A9 579 aaKnown RBP7.89□□□□□ -1.15
USP3-219ENST00000561326 JMJD1CQ15652 2540 aa7.88□□□□□ -1.15
USP3-219ENST00000561326 TRBV19A0A075B6N1 114 aa7.88□□□□□ -1.15
USP3-219ENST00000561326 PGPA6NDG6 321 aa7.88□□□□□ -1.15
USP3-219ENST00000561326 HELTA6NFD8 242 aa7.88□□□□□ -1.15
USP3-219ENST00000561326 C9JQL5 133 aa7.88□□□□□ -1.15
USP3-219ENST00000561326 H3BQ15 152 aa7.88□□□□□ -1.15
USP3-219ENST00000561326 M0QZ24 198 aa7.88□□□□□ -1.15
USP3-219ENST00000561326 IGLC2P0DOY2 106 aa7.88□□□□□ -1.15
USP3-219ENST00000561326 SYNJ2BPP57105 145 aa7.88□□□□□ -1.15
USP3-219ENST00000561326 TM4SF20Q53R12 229 aa7.88□□□□□ -1.15
USP3-219ENST00000561326 C16orf54Q6UWD8 224 aa7.88□□□□□ -1.15
USP3-219ENST00000561326 C11orf44Q8N8P7 122 aa7.88□□□□□ -1.15
USP3-219ENST00000561326 CMTM2Q8TAZ6 248 aa7.88□□□□□ -1.15
USP3-219ENST00000561326 RPUSD4Q96CM3 377 aaKnown RBP7.88□□□□□ -1.15
USP3-219ENST00000561326 CITED2Q99967 270 aaPredicted RBP7.88□□□□□ -1.15
USP3-219ENST00000561326 OTORQ9NRC9 128 aa7.88□□□□□ -1.15
USP3-219ENST00000561326 SMPXQ9UHP9 88 aa7.88□□□□□ -1.15
USP3-219ENST00000561326 IGHV3OR16-13A0A075B7E8 117 aa7.87□□□□□ -1.15
USP3-219ENST00000561326 IGHV3-49A0A0A0MS15 119 aa7.87□□□□□ -1.15
USP3-219ENST00000561326 IGHV3-74A0A0B4J1X5 117 aa7.87□□□□□ -1.15
USP3-219ENST00000561326 IGHV3-66A0A0C4DH42 116 aa7.87□□□□□ -1.15
USP3-219ENST00000561326 A0A1W2PRX2 142 aa7.87□□□□□ -1.15
USP3-219ENST00000561326 A8MWP6 167 aa7.87□□□□□ -1.15
USP3-219ENST00000561326 CCL24O00175 119 aa7.87□□□□□ -1.15
USP3-219ENST00000561326 MRPS12O15235 138 aaKnown RBP7.87□□□□□ -1.15
USP3-219ENST00000561326 ZNF253O75346 499 aa7.87□□□□□ -1.15
USP3-219ENST00000561326 APOC3P02656 99 aa7.87□□□□□ -1.15
USP3-219ENST00000561326 APOHP02749 345 aaPredicted RBP7.87□□□□□ -1.15
USP3-219ENST00000561326 ATP5G3P48201 142 aa7.87□□□□□ -1.15
USP3-219ENST00000561326 C10orf91Q5T1B1 145 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms