RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 FAM25EA8MYX2 175 aa12.38□□□□□ -0.43
CDC42BPB-208ENST00000561271 IGLL5B9A064 214 aa12.38□□□□□ -0.43
CDC42BPB-208ENST00000561271 C11orf94C9JXX5 98 aa12.38□□□□□ -0.43
CDC42BPB-208ENST00000561271 OR5G3P0C626 314 aa12.38□□□□□ -0.43
CDC42BPB-208ENST00000561271 RAP2BP61225 183 aa12.38□□□□□ -0.43
CDC42BPB-208ENST00000561271 ARL16Q0P5N6 197 aa12.38□□□□□ -0.43
CDC42BPB-208ENST00000561271 FAM78BQ5VT40 261 aa12.38□□□□□ -0.43
CDC42BPB-208ENST00000561271 IGFL4Q6B9Z1 124 aa12.38□□□□□ -0.43
CDC42BPB-208ENST00000561271 LGALS9CQ6DKI2 356 aa12.38□□□□□ -0.43
CDC42BPB-208ENST00000561271 EBLN2Q6P2I7 272 aa12.38□□□□□ -0.43
CDC42BPB-208ENST00000561271 OR10P1Q8NGE3 313 aa12.38□□□□□ -0.43
CDC42BPB-208ENST00000561271 GPR82Q96P67 336 aa12.38□□□□□ -0.43
CDC42BPB-208ENST00000561271 SHANK2-AS3Q9BTD1 123 aa12.38□□□□□ -0.43
CDC42BPB-208ENST00000561271 CCDC32Q9BV29 185 aa12.38□□□□□ -0.43
CDC42BPB-208ENST00000561271 C7orf66A4D0T2 115 aa12.37□□□□□ -0.43
CDC42BPB-208ENST00000561271 ZNF705FA8MVS1 300 aaPredicted RBP12.37□□□□□ -0.43
CDC42BPB-208ENST00000561271 HYPMO75409 117 aa12.37□□□□□ -0.43
CDC42BPB-208ENST00000561271 ZNF705DP0CH99 300 aaPredicted RBP12.37□□□□□ -0.43
CDC42BPB-208ENST00000561271 ZNF705BP0CI00 300 aaPredicted RBP12.37□□□□□ -0.43
CDC42BPB-208ENST00000561271 S100A7P31151 101 aa12.37□□□□□ -0.43
CDC42BPB-208ENST00000561271 TAS2R30P59541 319 aa12.37□□□□□ -0.43
CDC42BPB-208ENST00000561271 FGL1Q08830 312 aa12.37□□□□□ -0.43
CDC42BPB-208ENST00000561271 ZNF846Q147U1 533 aa12.37□□□□□ -0.43
CDC42BPB-208ENST00000561271 RNF182Q8N6D2 247 aa12.37□□□□□ -0.43
CDC42BPB-208ENST00000561271 ZNF431Q8TF32 576 aaPredicted RBP12.37□□□□□ -0.43
CDC42BPB-208ENST00000561271 CLUHP3Q96NS8 147 aa12.37□□□□□ -0.43
CDC42BPB-208ENST00000561271 LSM5Q9Y4Y9 91 aaKnown RBP12.37□□□□□ -0.43
CDC42BPB-208ENST00000561271 TRAV8-2A0A0B4J237 113 aa12.36□□□□□ -0.43
CDC42BPB-208ENST00000561271 TRAV10A0A0B4J240 114 aa12.36□□□□□ -0.43
CDC42BPB-208ENST00000561271 FNDC10F2Z333 226 aa12.36□□□□□ -0.43
CDC42BPB-208ENST00000561271 SELENOTP62341 195 aa12.36□□□□□ -0.43
CDC42BPB-208ENST00000561271 PSG9Q00887 426 aa12.36□□□□□ -0.43
CDC42BPB-208ENST00000561271 C12orf74Q32Q52 190 aa12.36□□□□□ -0.43
CDC42BPB-208ENST00000561271 SPATA31B1PQ5VZV4 182 aa12.36□□□□□ -0.43
CDC42BPB-208ENST00000561271 ARL6Q9H0F7 186 aa12.36□□□□□ -0.43
CDC42BPB-208ENST00000561271 NPVFQ9HCQ7 196 aa12.36□□□□□ -0.43
CDC42BPB-208ENST00000561271 APLNQ9ULZ1 77 aa12.36□□□□□ -0.43
CDC42BPB-208ENST00000561271 C5orf51A6NDU8 294 aa12.35□□□□□ -0.43
CDC42BPB-208ENST00000561271 K7EPK0 472 aa12.35□□□□□ -0.43
CDC42BPB-208ENST00000561271 L7N2F9 121 aa12.35□□□□□ -0.43
CDC42BPB-208ENST00000561271 EMP1P54849 157 aa12.35□□□□□ -0.43
CDC42BPB-208ENST00000561271 PLP1P60201 277 aa12.35□□□□□ -0.43
CDC42BPB-208ENST00000561271 VAMP2P63027 116 aa12.35□□□□□ -0.43
CDC42BPB-208ENST00000561271 TEPPQ6URK8 271 aa12.35□□□□□ -0.43
CDC42BPB-208ENST00000561271 NEU1Q99519 415 aa12.35□□□□□ -0.43
CDC42BPB-208ENST00000561271 NACAE9PAV3 2078 aa12.34□□□□□ -0.43
CDC42BPB-208ENST00000561271 H2AFB2P0C5Z0 115 aa12.34□□□□□ -0.43
CDC42BPB-208ENST00000561271 RPL7P18124 248 aaKnown RBP12.34□□□□□ -0.43
CDC42BPB-208ENST00000561271 TCTAP57738 103 aa12.34□□□□□ -0.43
CDC42BPB-208ENST00000561271 PRR20EP86478 221 aa12.34□□□□□ -0.43
CDC42BPB-208ENST00000561271 PRR20CP86479 221 aa12.34□□□□□ -0.43
CDC42BPB-208ENST00000561271 PRR20DP86480 221 aa12.34□□□□□ -0.43
CDC42BPB-208ENST00000561271 PRR20BP86481 221 aa12.34□□□□□ -0.43
CDC42BPB-208ENST00000561271 PRR20AP86496 221 aa12.34□□□□□ -0.43
CDC42BPB-208ENST00000561271 AMTNQ6UX39 209 aa12.34□□□□□ -0.43
CDC42BPB-208ENST00000561271 PATE2Q6UY27 113 aa12.34□□□□□ -0.43
CDC42BPB-208ENST00000561271 ZNF546Q86UE3 836 aa12.34□□□□□ -0.43
CDC42BPB-208ENST00000561271 C12orf45Q8N5I9 185 aaPredicted RBP12.34□□□□□ -0.43
CDC42BPB-208ENST00000561271 IGHV4-4A0A075B6R2 117 aa12.33□□□□□ -0.44
CDC42BPB-208ENST00000561271 FAM240BA0A1B0GVZ2 78 aa12.33□□□□□ -0.44
CDC42BPB-208ENST00000561271 A8MTW9 85 aa12.33□□□□□ -0.44
CDC42BPB-208ENST00000561271 AGPAT2O15120 278 aa12.33□□□□□ -0.44
CDC42BPB-208ENST00000561271 BCAP31P51572 246 aa12.33□□□□□ -0.44
CDC42BPB-208ENST00000561271 CAV2P51636 162 aa12.33□□□□□ -0.44
CDC42BPB-208ENST00000561271 CNN1P51911 297 aaKnown RBP12.33□□□□□ -0.44
CDC42BPB-208ENST00000561271 C1orf158Q8N1D5 194 aa12.33□□□□□ -0.44
CDC42BPB-208ENST00000561271 ZNF738Q8NE65 137 aa12.33□□□□□ -0.44
CDC42BPB-208ENST00000561271 MGST2Q99735 147 aa12.33□□□□□ -0.44
CDC42BPB-208ENST00000561271 ARV1Q9H2C2 271 aa12.33□□□□□ -0.44
CDC42BPB-208ENST00000561271 GOLT1BQ9Y3E0 138 aa12.33□□□□□ -0.44
CDC42BPB-208ENST00000561271 RFNGQ9Y644 331 aa12.33□□□□□ -0.44
CDC42BPB-208ENST00000561271 DNAH10Q8IVF4 4471 aa12.33□□□□□ -0.44
CDC42BPB-208ENST00000561271 A0A087X0K7 114 aa12.32□□□□□ -0.44
CDC42BPB-208ENST00000561271 DEFB131BA0A096LNP1 70 aa12.32□□□□□ -0.44
CDC42BPB-208ENST00000561271 SMIM9A6NGZ8 99 aa12.32□□□□□ -0.44
CDC42BPB-208ENST00000561271 GOSR2O14653 212 aa12.32□□□□□ -0.44
CDC42BPB-208ENST00000561271 CST7O76096 145 aa12.32□□□□□ -0.44
CDC42BPB-208ENST00000561271 PRB4P10163 310 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPB-208ENST00000561271 S100A10P60903 97 aa12.32□□□□□ -0.44
CDC42BPB-208ENST00000561271 SPINK13Q1W4C9 94 aa12.32□□□□□ -0.44
CDC42BPB-208ENST00000561271 GGACTQ9BVM4 153 aa12.32□□□□□ -0.44
CDC42BPB-208ENST00000561271 C11orf1Q9H5F2 150 aa12.32□□□□□ -0.44
CDC42BPB-208ENST00000561271 M0R2Z0 102 aa12.31□□□□□ -0.44
CDC42BPB-208ENST00000561271 AMBPP02760 352 aa12.31□□□□□ -0.44
CDC42BPB-208ENST00000561271 OR11H7Q8NGC8 314 aa12.31□□□□□ -0.44
CDC42BPB-208ENST00000561271 C2orf50Q96LR7 162 aa12.31□□□□□ -0.44
CDC42BPB-208ENST00000561271 LOC102723971A0A1B0GUV8 181 aa12.3□□□□□ -0.44
CDC42BPB-208ENST00000561271 TMEM189A5PLL7 270 aa12.3□□□□□ -0.44
CDC42BPB-208ENST00000561271 FAM24AA6NFZ4 105 aa12.3□□□□□ -0.44
CDC42BPB-208ENST00000561271 MRPS12O15235 138 aaKnown RBP12.3□□□□□ -0.44
CDC42BPB-208ENST00000561271 COX7A2P2O60397 106 aa12.3□□□□□ -0.44
CDC42BPB-208ENST00000561271 HBE1P02100 147 aa12.3□□□□□ -0.44
CDC42BPB-208ENST00000561271 SNRPCP09234 159 aaKnown RBP12.3□□□□□ -0.44
CDC42BPB-208ENST00000561271 CXCL3P19876 107 aa12.3□□□□□ -0.44
CDC42BPB-208ENST00000561271 ASAH1Q13510 395 aa12.3□□□□□ -0.44
CDC42BPB-208ENST00000561271 MZT2BQ6NZ67 158 aa12.3□□□□□ -0.44
CDC42BPB-208ENST00000561271 LINC00299Q6ZSB3 139 aa12.3□□□□□ -0.44
CDC42BPB-208ENST00000561271 LINC00305Q7Z4B0 112 aa12.3□□□□□ -0.44
CDC42BPB-208ENST00000561271 S100ZQ8WXG8 99 aa12.3□□□□□ -0.44
CDC42BPB-208ENST00000561271 IGF2BP2-AS1Q96M15 143 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms