RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 ZNF709Q8N972 641 aa6.68□□□□□ -1.34
SNRPA1-214ENST00000560987 OR5C1Q8NGR4 320 aa6.68□□□□□ -1.34
SNRPA1-214ENST00000560987 THAP6Q8TBB0 222 aa6.68□□□□□ -1.34
SNRPA1-214ENST00000560987 DCANP1Q8TF63 244 aa6.68□□□□□ -1.34
SNRPA1-214ENST00000560987 C16orf92Q96LL3 132 aa6.68□□□□□ -1.34
SNRPA1-214ENST00000560987 GPR82Q96P67 336 aa6.68□□□□□ -1.34
SNRPA1-214ENST00000560987 RNF126Q9BV68 326 aa6.68□□□□□ -1.34
SNRPA1-214ENST00000560987 SLC25A39Q9BZJ4 359 aaPredicted RBP6.68□□□□□ -1.34
SNRPA1-214ENST00000560987 CSTL1Q9H114 145 aa6.68□□□□□ -1.34
SNRPA1-214ENST00000560987 DNAJC4Q9NNZ3 241 aa6.68□□□□□ -1.34
SNRPA1-214ENST00000560987 SLC45A2Q9UMX9 530 aa6.68□□□□□ -1.34
SNRPA1-214ENST00000560987 KIR2DL5BA0A0G2JN68 375 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 KIR2DL5BA0A0G2JPC4 375 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 H0YIZ8 118 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 C3orf84H3BNL1 204 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 SPRY2O43597 315 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 CXCL3P19876 107 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 RPL12P30050 165 aaKnown RBP6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 EWSR1Q01844 656 aaKnown RBP eCLIP6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 FCN2Q15485 313 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 PXDC1Q5TGL8 231 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 C10orf113Q5VZT2 155 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 MIC13Q5XKP0 118 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 KIR2DL5AQ8N109 375 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 LINC00528Q8N1L1 170 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 KIR2DL5BQ8NHK3 375 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 SCGB1C1Q8TD33 95 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 UHRF2Q96PU4 802 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 MGST2Q99735 147 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 SHANK2-AS3Q9BTD1 123 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 SCRT1Q9BWW7 348 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 ARV1Q9H2C2 271 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 RNF24Q9Y225 148 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 COL7A1Q02388 2944 aa6.67□□□□□ -1.34
SNRPA1-214ENST00000560987 ELOA3CA0A087WX78 387 aaPredicted RBP6.66□□□□□ -1.34
SNRPA1-214ENST00000560987 H3BRN7 92 aa6.66□□□□□ -1.34
SNRPA1-214ENST00000560987 CA1P00915 261 aaPredicted RBP6.66□□□□□ -1.34
SNRPA1-214ENST00000560987 IFNA5P01569 189 aa6.66□□□□□ -1.34
SNRPA1-214ENST00000560987 IGKV3-20P01619 116 aa6.66□□□□□ -1.34
SNRPA1-214ENST00000560987 RPL7P18124 248 aaKnown RBP6.66□□□□□ -1.34
SNRPA1-214ENST00000560987 MEOX2P50222 304 aa6.66□□□□□ -1.34
SNRPA1-214ENST00000560987 PLP1P60201 277 aa6.66□□□□□ -1.34
SNRPA1-214ENST00000560987 DEFB135Q30KP9 77 aa6.66□□□□□ -1.34
SNRPA1-214ENST00000560987 EBLN2Q6P2I7 272 aa6.66□□□□□ -1.34
SNRPA1-214ENST00000560987 PATE2Q6UY27 113 aa6.66□□□□□ -1.34
SNRPA1-214ENST00000560987 Q6ZWC4 215 aa6.66□□□□□ -1.34
SNRPA1-214ENST00000560987 LINC00305Q7Z4B0 112 aa6.66□□□□□ -1.34
SNRPA1-214ENST00000560987 OR1L4Q8NGR5 311 aa6.66□□□□□ -1.34
SNRPA1-214ENST00000560987 SMIM3Q9BZL3 60 aa6.66□□□□□ -1.34
SNRPA1-214ENST00000560987 SLC25A32Q9H2D1 315 aa6.66□□□□□ -1.34
SNRPA1-214ENST00000560987 SLC39A9Q9NUM3 307 aa6.66□□□□□ -1.34
SNRPA1-214ENST00000560987 WDR83OSQ9Y284 106 aa6.66□□□□□ -1.34
SNRPA1-214ENST00000560987 MPDU1O75352 247 aa6.65□□□□□ -1.34
SNRPA1-214ENST00000560987 SNRPCP09234 159 aaKnown RBP6.65□□□□□ -1.34
SNRPA1-214ENST00000560987 RPL29P47914 159 aaKnown RBP6.65□□□□□ -1.34
SNRPA1-214ENST00000560987 B2MP61769 119 aa6.65□□□□□ -1.34
SNRPA1-214ENST00000560987 NUTF2P61970 127 aaKnown RBP6.65□□□□□ -1.34
SNRPA1-214ENST00000560987 VWC2Q2TAL6 325 aa6.65□□□□□ -1.34
SNRPA1-214ENST00000560987 IGFL4Q6B9Z1 124 aa6.65□□□□□ -1.34
SNRPA1-214ENST00000560987 OR11H7Q8NGC8 314 aa6.65□□□□□ -1.34
SNRPA1-214ENST00000560987 OR4B1Q8NGF8 309 aa6.65□□□□□ -1.34
SNRPA1-214ENST00000560987 PFDN5Q99471 154 aa6.65□□□□□ -1.34
SNRPA1-214ENST00000560987 OVOL2Q9BRP0 275 aa6.65□□□□□ -1.34
SNRPA1-214ENST00000560987 SEPSECSQ9HD40 501 aaKnown RBP6.65□□□□□ -1.34
SNRPA1-214ENST00000560987 RPRMQ9NS64 109 aa6.65□□□□□ -1.34
SNRPA1-214ENST00000560987 MBD2Q9UBB5 411 aa6.65□□□□□ -1.34
SNRPA1-214ENST00000560987 PXMP4Q9Y6I8 212 aa6.65□□□□□ -1.34
SNRPA1-214ENST00000560987 NBEAL2Q6ZNJ1 2754 aa6.64□□□□□ -1.35
SNRPA1-214ENST00000560987 TRAV5A0A0B4J249 113 aa6.64□□□□□ -1.35
SNRPA1-214ENST00000560987 C17orf112F2Z3M2 114 aa6.64□□□□□ -1.35
SNRPA1-214ENST00000560987 ISLRO14498 428 aa6.64□□□□□ -1.35
SNRPA1-214ENST00000560987 PSMB3P49720 205 aa6.64□□□□□ -1.35
SNRPA1-214ENST00000560987 SAMD13Q5VXD3 122 aa6.64□□□□□ -1.35
SNRPA1-214ENST00000560987 MORN3Q6PF18 240 aaPredicted RBP6.64□□□□□ -1.35
SNRPA1-214ENST00000560987 BPIFA4PQ86YQ2 179 aa6.64□□□□□ -1.35
SNRPA1-214ENST00000560987 TMEM37Q8WXS4 190 aa6.64□□□□□ -1.35
SNRPA1-214ENST00000560987 RNF183Q96D59 192 aa6.64□□□□□ -1.35
SNRPA1-214ENST00000560987 RARRES2Q99969 163 aa6.64□□□□□ -1.35
SNRPA1-214ENST00000560987 HSPB11Q9Y547 144 aa6.64□□□□□ -1.35
SNRPA1-214ENST00000560987 H3BMM0 161 aa6.63□□□□□ -1.35
SNRPA1-214ENST00000560987 SPP1P10451 314 aa6.63□□□□□ -1.35
SNRPA1-214ENST00000560987 LYL1P12980 280 aa6.63□□□□□ -1.35
SNRPA1-214ENST00000560987 FXYD7P58549 80 aa6.63□□□□□ -1.35
SNRPA1-214ENST00000560987 DEFB1P60022 68 aa6.63□□□□□ -1.35
SNRPA1-214ENST00000560987 OPCMLQ14982 345 aa6.63□□□□□ -1.35
SNRPA1-214ENST00000560987 OXA1LQ15070 435 aa6.63□□□□□ -1.35
SNRPA1-214ENST00000560987 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.63□□□□□ -1.35
SNRPA1-214ENST00000560987 TRPT1Q86TN4 253 aaKnown RBP6.63□□□□□ -1.35
SNRPA1-214ENST00000560987 INO80EQ8NBZ0 244 aaPredicted RBP6.63□□□□□ -1.35
SNRPA1-214ENST00000560987 ZNF738Q8NE65 137 aa6.63□□□□□ -1.35
SNRPA1-214ENST00000560987 OR11H2Q8NH07 326 aa6.63□□□□□ -1.35
SNRPA1-214ENST00000560987 MUC7Q8TAX7 377 aa6.63□□□□□ -1.35
SNRPA1-214ENST00000560987 ATP5SQ99766 215 aa6.63□□□□□ -1.35
SNRPA1-214ENST00000560987 NPCDR1Q9BY65 106 aa6.63□□□□□ -1.35
SNRPA1-214ENST00000560987 PPP1R14DQ9NXH3 145 aa6.63□□□□□ -1.35
SNRPA1-214ENST00000560987 TP53TG1Q9Y2A0 90 aa6.63□□□□□ -1.35
SNRPA1-214ENST00000560987 AGRNO00468 2067 aa6.62□□□□□ -1.35
SNRPA1-214ENST00000560987 F6UB75 175 aa6.62□□□□□ -1.35
SNRPA1-214ENST00000560987 H3BTX0 84 aa6.62□□□□□ -1.35
SNRPA1-214ENST00000560987 GIPP09681 153 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms