RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 C11orf44Q8N8P7 122 aa4.15□□□□□ -1.75
ZEB1-220ENST00000560909 ZNF709Q8N972 641 aa4.15□□□□□ -1.75
ZEB1-220ENST00000560909 HSD17B11Q8NBQ5 300 aa4.15□□□□□ -1.75
ZEB1-220ENST00000560909 OR4F17Q8NGA8 305 aa4.15□□□□□ -1.75
ZEB1-220ENST00000560909 SUN5Q8TC36 379 aa4.15□□□□□ -1.75
ZEB1-220ENST00000560909 MBD3L1Q8WWY6 194 aa4.15□□□□□ -1.75
ZEB1-220ENST00000560909 DLX4Q92988 240 aaPredicted RBP4.15□□□□□ -1.75
ZEB1-220ENST00000560909 MARC2Q969Z3 335 aa4.15□□□□□ -1.75
ZEB1-220ENST00000560909 RNF125Q96EQ8 232 aa4.15□□□□□ -1.75
ZEB1-220ENST00000560909 FAM167A-AS1Q96KT0 104 aa4.15□□□□□ -1.75
ZEB1-220ENST00000560909 OR5B12Q96R08 314 aa4.15□□□□□ -1.75
ZEB1-220ENST00000560909 OR4F4Q96R69 305 aa4.15□□□□□ -1.75
ZEB1-220ENST00000560909 SHANK2-AS3Q9BTD1 123 aa4.15□□□□□ -1.75
ZEB1-220ENST00000560909 SH3BGRL3Q9H299 93 aa4.15□□□□□ -1.75
ZEB1-220ENST00000560909 SLC25A32Q9H2D1 315 aa4.15□□□□□ -1.75
ZEB1-220ENST00000560909 VSIRQ9H7M9 311 aa4.15□□□□□ -1.75
ZEB1-220ENST00000560909 RPRMQ9NS64 109 aa4.15□□□□□ -1.75
ZEB1-220ENST00000560909 PLA2G2DQ9UNK4 145 aa4.15□□□□□ -1.75
ZEB1-220ENST00000560909 UFC1Q9Y3C8 167 aa4.15□□□□□ -1.75
ZEB1-220ENST00000560909 NOTCH1P46531 2555 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 TRAV1-1A0A0B4J248 108 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 C2orf70A6NJV1 201 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 H3BRN7 92 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 BUB3O43684 328 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 PLA2G1BP04054 148 aaKnown RBP4.14□□□□□ -1.75
ZEB1-220ENST00000560909 IL4P05112 153 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 CSN3P07498 182 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 SYNJ2BPP57105 145 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 IFITM2Q01629 132 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 ZNF726P1Q15940 193 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 ACOT6Q3I5F7 207 aaPredicted RBP4.14□□□□□ -1.75
ZEB1-220ENST00000560909 TMEM41BQ5BJD5 291 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 GCSAMLQ5JQS6 135 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 FFAR4Q5NUL3 377 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 FAM90A2PQ658T7 463 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 HIST2H2BDQ6DRA6 164 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 Q6ZRG5 221 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 S100A7AQ86SG5 101 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 C3orf56Q8N813 242 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 ZNF680Q8NEM1 530 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 OR9G4Q8NGQ1 327 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 OR1L4Q8NGR5 311 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 SPATA3Q8NHX4 192 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 LYPD6BQ8NI32 183 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 TMED6Q8WW62 240 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 DPF1Q92782 380 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 C17orf77Q96MU5 243 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 PFDN5Q99471 154 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 RNF2Q99496 336 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 MRPL32Q9BYC8 188 aaKnown RBP4.14□□□□□ -1.75
ZEB1-220ENST00000560909 DAZ1Q9NQZ3 744 aaKnown RBP4.14□□□□□ -1.75
ZEB1-220ENST00000560909 TMEM14CQ9P0S9 112 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 SMPXQ9UHP9 88 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 RNF24Q9Y225 148 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 X6R8D5 127 aa4.14□□□□□ -1.75
ZEB1-220ENST00000560909 IGHV3-35A0A0C4DH35 117 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 IGHV7-4-1A0A0J9YVY3 117 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 A0A1W2PRX2 142 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 ZNF98A6NK75 572 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 OVOL1O14753 267 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 CHEK1O14757 476 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 CD5P06127 495 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 FOLR2P14207 255 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 CBLN1P23435 193 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 NPPCP23582 126 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 S100A7P31151 101 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 RAB2AP61019 212 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 NSUN5P1Q3KNT7 163 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 TM4SF20Q53R12 229 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 KHDC1LQ5JSQ8 128 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 MORN5Q5VZ52 161 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 C10orf113Q5VZT2 155 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 C16orf54Q6UWD8 224 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 OR10G4Q8NGN3 311 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 OR10G9Q8NGN4 311 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 OR10G7Q8NGN6 311 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 GLMPQ8WWB7 406 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 SAT2Q96F10 170 aaPredicted RBP4.13□□□□□ -1.75
ZEB1-220ENST00000560909 ZNF503Q96F45 646 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 DUX3Q96PT4 197 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 METTL26Q96S19 204 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 SLC25A39Q9BZJ4 359 aaPredicted RBP4.13□□□□□ -1.75
ZEB1-220ENST00000560909 SEPSECSQ9HD40 501 aaKnown RBP4.13□□□□□ -1.75
ZEB1-220ENST00000560909 PEMTQ9UBM1 199 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 PFDN2Q9UHV9 154 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 RABAC1Q9UI14 185 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 FUT9Q9Y231 359 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 HIGD1AQ9Y241 93 aa4.13□□□□□ -1.75
ZEB1-220ENST00000560909 A0A087X0K7 114 aa4.12□□□□□ -1.75
ZEB1-220ENST00000560909 TRAV2A0A0B4J234 112 aa4.12□□□□□ -1.75
ZEB1-220ENST00000560909 TRAV25A0A0B4J276 109 aa4.12□□□□□ -1.75
ZEB1-220ENST00000560909 CTXND1A0A1B0GTU2 59 aa4.12□□□□□ -1.75
ZEB1-220ENST00000560909 A0A1W2PS18 150 aa4.12□□□□□ -1.75
ZEB1-220ENST00000560909 ZNF320A2RRD8 509 aa4.12□□□□□ -1.75
ZEB1-220ENST00000560909 M0QZ24 198 aa4.12□□□□□ -1.75
ZEB1-220ENST00000560909 COX7A2P2O60397 106 aa4.12□□□□□ -1.75
ZEB1-220ENST00000560909 IFNA7P01567 189 aa4.12□□□□□ -1.75
ZEB1-220ENST00000560909 APOHP02749 345 aaPredicted RBP4.12□□□□□ -1.75
ZEB1-220ENST00000560909 STAG3L2P0CL84 134 aa4.12□□□□□ -1.75
ZEB1-220ENST00000560909 STAG3L3P0CL85 134 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms