RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 PAXXQ9BUH6 204 aa8.65□□□□□ -1.02
SNX1-212ENST00000560861 EIF5A2Q9GZV4 153 aaKnown RBP8.65□□□□□ -1.02
SNX1-212ENST00000560861 TREM1Q9NP99 234 aa8.65□□□□□ -1.02
SNX1-212ENST00000560861 RABAC1Q9UI14 185 aa8.65□□□□□ -1.02
SNX1-212ENST00000560861 H3BQ15 152 aa8.64□□□□□ -1.03
SNX1-212ENST00000560861 BUB3O43684 328 aa8.64□□□□□ -1.03
SNX1-212ENST00000560861 OR10J4P0C629 311 aa8.64□□□□□ -1.03
SNX1-212ENST00000560861 SFTA3P0C7M3 94 aa8.64□□□□□ -1.03
SNX1-212ENST00000560861 ATP5G3P48201 142 aa8.64□□□□□ -1.03
SNX1-212ENST00000560861 MEF2BQ02080 365 aaPredicted RBP8.64□□□□□ -1.03
SNX1-212ENST00000560861 GPHB5Q86YW7 130 aa8.64□□□□□ -1.03
SNX1-212ENST00000560861 CCDC28AQ8IWP9 274 aa8.64□□□□□ -1.03
SNX1-212ENST00000560861 OR5B12Q96R08 314 aa8.64□□□□□ -1.03
SNX1-212ENST00000560861 TXNDC17Q9BRA2 123 aa8.64□□□□□ -1.03
SNX1-212ENST00000560861 SLC35B3Q9H1N7 401 aa8.64□□□□□ -1.03
SNX1-212ENST00000560861 CARHSP1Q9Y2V2 147 aaKnown RBP8.64□□□□□ -1.03
SNX1-212ENST00000560861 IGHV4OR15-8A0A075B7B6 117 aa8.63□□□□□ -1.03
SNX1-212ENST00000560861 IGHV3OR16-8A0A075B7F1 116 aa8.63□□□□□ -1.03
SNX1-212ENST00000560861 A0A087WW49 117 aa8.63□□□□□ -1.03
SNX1-212ENST00000560861 A0A1W2PRE2 83 aa8.63□□□□□ -1.03
SNX1-212ENST00000560861 GGTLC3B5MD39 225 aa8.63□□□□□ -1.03
SNX1-212ENST00000560861 APOHP02749 345 aaPredicted RBP8.63□□□□□ -1.03
SNX1-212ENST00000560861 HIST1H1EP10412 219 aaKnown RBP8.63□□□□□ -1.03
SNX1-212ENST00000560861 NPPCP23582 126 aa8.63□□□□□ -1.03
SNX1-212ENST00000560861 UBE2G2P60604 165 aa8.63□□□□□ -1.03
SNX1-212ENST00000560861 SRSF2Q01130 221 aaKnown RBP8.63□□□□□ -1.03
SNX1-212ENST00000560861 FAM90A2PQ658T7 463 aa8.63□□□□□ -1.03
SNX1-212ENST00000560861 S100A7AQ86SG5 101 aa8.63□□□□□ -1.03
SNX1-212ENST00000560861 IQCF2Q8IXL9 164 aa8.63□□□□□ -1.03
SNX1-212ENST00000560861 OR4F5Q8NH21 305 aa8.63□□□□□ -1.03
SNX1-212ENST00000560861 C4orf3Q8WVX3 66 aa8.63□□□□□ -1.03
SNX1-212ENST00000560861 C11orf52Q96A22 123 aa8.63□□□□□ -1.03
SNX1-212ENST00000560861 ZNF586Q9NXT0 402 aa8.63□□□□□ -1.03
SNX1-212ENST00000560861 SMAD5-AS1Q9Y6J3 95 aa8.63□□□□□ -1.03
SNX1-212ENST00000560861 C11orf94C9JXX5 98 aa8.62□□□□□ -1.03
SNX1-212ENST00000560861 TMEM250H0YL14 139 aa8.62□□□□□ -1.03
SNX1-212ENST00000560861 K7EMT4 169 aa8.62□□□□□ -1.03
SNX1-212ENST00000560861 NDUFB4O95168 129 aa8.62□□□□□ -1.03
SNX1-212ENST00000560861 NBEAP1P0C6P0 100 aa8.62□□□□□ -1.03
SNX1-212ENST00000560861 CD28P10747 220 aa8.62□□□□□ -1.03
SNX1-212ENST00000560861 C1orf194Q5T5A4 169 aa8.62□□□□□ -1.03
SNX1-212ENST00000560861 REC114Q7Z4M0 266 aa8.62□□□□□ -1.03
SNX1-212ENST00000560861 BPIFA4PQ86YQ2 179 aa8.62□□□□□ -1.03
SNX1-212ENST00000560861 CYB561D1Q8N8Q1 229 aa8.62□□□□□ -1.03
SNX1-212ENST00000560861 SEC11CQ9BY50 192 aa8.62□□□□□ -1.03
SNX1-212ENST00000560861 A0A087X0K7 114 aa8.61□□□□□ -1.03
SNX1-212ENST00000560861 ADARB2-AS1A8MUL3 147 aa8.61□□□□□ -1.03
SNX1-212ENST00000560861 A8MWP6 167 aa8.61□□□□□ -1.03
SNX1-212ENST00000560861 LGALS9O00182 355 aa8.61□□□□□ -1.03
SNX1-212ENST00000560861 ZNF207O43670 478 aaKnown RBP8.61□□□□□ -1.03
SNX1-212ENST00000560861 RPL7P18124 248 aaKnown RBP8.61□□□□□ -1.03
SNX1-212ENST00000560861 S100A7P31151 101 aa8.61□□□□□ -1.03
SNX1-212ENST00000560861 KRTAP10-3P60369 221 aa8.61□□□□□ -1.03
SNX1-212ENST00000560861 C16orf54Q6UWD8 224 aa8.61□□□□□ -1.03
SNX1-212ENST00000560861 GLMPQ8WWB7 406 aa8.61□□□□□ -1.03
SNX1-212ENST00000560861 NARS2Q96I59 477 aaKnown RBP8.61□□□□□ -1.03
SNX1-212ENST00000560861 OR4F4Q96R69 305 aa8.61□□□□□ -1.03
SNX1-212ENST00000560861 METTL26Q96S19 204 aa8.61□□□□□ -1.03
SNX1-212ENST00000560861 RNF24Q9Y225 148 aa8.61□□□□□ -1.03
SNX1-212ENST00000560861 RNF114Q9Y508 228 aa8.61□□□□□ -1.03
SNX1-212ENST00000560861 ATRQ13535 2644 aa8.6□□□□□ -1.03
SNX1-212ENST00000560861 TRBV19A0A075B6N1 114 aa8.6□□□□□ -1.03
SNX1-212ENST00000560861 IGHV7-4-1A0A0J9YVY3 117 aa8.6□□□□□ -1.03
SNX1-212ENST00000560861 TMEM213A2RRL7 107 aa8.6□□□□□ -1.03
SNX1-212ENST00000560861 F6UZH7 168 aa8.6□□□□□ -1.03
SNX1-212ENST00000560861 HOXD3P31249 432 aaPredicted RBP8.6□□□□□ -1.03
SNX1-212ENST00000560861 FHL3Q13643 280 aa8.6□□□□□ -1.03
SNX1-212ENST00000560861 KLF5Q13887 457 aaPredicted RBP8.6□□□□□ -1.03
SNX1-212ENST00000560861 CST9LP1Q5W188 147 aa8.6□□□□□ -1.03
SNX1-212ENST00000560861 HIST2H2BDQ6DRA6 164 aa8.6□□□□□ -1.03
SNX1-212ENST00000560861 PRIMA1Q86XR5 153 aa8.6□□□□□ -1.03
SNX1-212ENST00000560861 GPR82Q96P67 336 aa8.6□□□□□ -1.03
SNX1-212ENST00000560861 C20orf24Q9BUV8 137 aa8.6□□□□□ -1.03
SNX1-212ENST00000560861 ELOVL1Q9BW60 279 aa8.6□□□□□ -1.03
SNX1-212ENST00000560861 FBN1P35555 2871 aaKnown RBP8.59□□□□□ -1.03
SNX1-212ENST00000560861 IGHV3-49A0A0A0MS15 119 aa8.59□□□□□ -1.03
SNX1-212ENST00000560861 F8W036 122 aa8.59□□□□□ -1.03
SNX1-212ENST00000560861 H3BTX0 84 aa8.59□□□□□ -1.03
SNX1-212ENST00000560861 SLC17A3O00476 420 aa8.59□□□□□ -1.03
SNX1-212ENST00000560861 PDE6DO43924 150 aa8.59□□□□□ -1.03
SNX1-212ENST00000560861 SNRPCP09234 159 aaKnown RBP8.59□□□□□ -1.03
SNX1-212ENST00000560861 EDN2P20800 178 aa8.59□□□□□ -1.03
SNX1-212ENST00000560861 PDE6HQ13956 83 aa8.59□□□□□ -1.03
SNX1-212ENST00000560861 GUCA2BQ16661 112 aa8.59□□□□□ -1.03
SNX1-212ENST00000560861 RPEL1Q2QD12 228 aa8.59□□□□□ -1.03
SNX1-212ENST00000560861 DEFB136Q30KP8 78 aa8.59□□□□□ -1.03
SNX1-212ENST00000560861 FAM106AQ4KMX7 169 aa8.59□□□□□ -1.03
SNX1-212ENST00000560861 TM4SF20Q53R12 229 aa8.59□□□□□ -1.03
SNX1-212ENST00000560861 SOHLH1Q5JUK2 328 aa8.59□□□□□ -1.03
SNX1-212ENST00000560861 SIGLEC15Q6ZMC9 328 aa8.59□□□□□ -1.03
SNX1-212ENST00000560861 C1QL4Q86Z23 238 aa8.59□□□□□ -1.03
SNX1-212ENST00000560861 OR4F17Q8NGA8 305 aa8.59□□□□□ -1.03
SNX1-212ENST00000560861 CITED2Q99967 270 aaPredicted RBP8.59□□□□□ -1.03
SNX1-212ENST00000560861 NKX6-2Q9C056 277 aaPredicted RBP8.59□□□□□ -1.03
SNX1-212ENST00000560861 DAZ1Q9NQZ3 744 aaKnown RBP8.59□□□□□ -1.03
SNX1-212ENST00000560861 SMPXQ9UHP9 88 aa8.59□□□□□ -1.03
SNX1-212ENST00000560861 TENM1Q9UKZ4 2725 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 IGHV3OR16-13A0A075B7E8 117 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 IGHV3-74A0A0B4J1X5 117 aa8.58□□□□□ -1.04
SNX1-212ENST00000560861 A0A1B0GUS0 222 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms