RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 SNRPD3P62318 126 aaKnown RBP11.18□□□□□ -0.62
SNRPA1-213ENST00000560856 OPCMLQ14982 345 aa11.18□□□□□ -0.62
SNRPA1-213ENST00000560856 MIC13Q5XKP0 118 aa11.18□□□□□ -0.62
SNRPA1-213ENST00000560856 STHQ8IWL8 128 aa11.18□□□□□ -0.62
SNRPA1-213ENST00000560856 OR11H7Q8NGC8 314 aa11.18□□□□□ -0.62
SNRPA1-213ENST00000560856 MUC7Q8TAX7 377 aa11.18□□□□□ -0.62
SNRPA1-213ENST00000560856 GPR82Q96P67 336 aa11.18□□□□□ -0.62
SNRPA1-213ENST00000560856 SLC25A31Q9H0C2 315 aa11.18□□□□□ -0.62
SNRPA1-213ENST00000560856 ARV1Q9H2C2 271 aa11.18□□□□□ -0.62
SNRPA1-213ENST00000560856 UBE2L5PA0A1B0GUS4 154 aa11.17□□□□□ -0.62
SNRPA1-213ENST00000560856 H3BMM0 161 aa11.17□□□□□ -0.62
SNRPA1-213ENST00000560856 LYL1P12980 280 aa11.17□□□□□ -0.62
SNRPA1-213ENST00000560856 S100A7P31151 101 aa11.17□□□□□ -0.62
SNRPA1-213ENST00000560856 RPL29P47914 159 aaKnown RBP11.17□□□□□ -0.62
SNRPA1-213ENST00000560856 PSMB3P49720 205 aa11.17□□□□□ -0.62
SNRPA1-213ENST00000560856 FCN2Q15485 313 aa11.17□□□□□ -0.62
SNRPA1-213ENST00000560856 ACTL10Q5JWF8 245 aa11.17□□□□□ -0.62
SNRPA1-213ENST00000560856 MORN5Q5VZ52 161 aa11.17□□□□□ -0.62
SNRPA1-213ENST00000560856 OR5C1Q8NGR4 320 aa11.17□□□□□ -0.62
SNRPA1-213ENST00000560856 C20orf173Q96LM9 149 aa11.17□□□□□ -0.62
SNRPA1-213ENST00000560856 TRAV8-2A0A0B4J237 113 aa11.16□□□□□ -0.62
SNRPA1-213ENST00000560856 C3orf84H3BNL1 204 aa11.16□□□□□ -0.62
SNRPA1-213ENST00000560856 ISLRO14498 428 aa11.16□□□□□ -0.62
SNRPA1-213ENST00000560856 MEOX2P50222 304 aa11.16□□□□□ -0.62
SNRPA1-213ENST00000560856 BAXQ07812 192 aa11.16□□□□□ -0.62
SNRPA1-213ENST00000560856 RAB31Q13636 194 aa11.16□□□□□ -0.62
SNRPA1-213ENST00000560856 OXA1LQ15070 435 aa11.16□□□□□ -0.62
SNRPA1-213ENST00000560856 GDF5OSQ5U4N7 250 aa11.16□□□□□ -0.62
SNRPA1-213ENST00000560856 MBD2Q9UBB5 411 aa11.16□□□□□ -0.62
SNRPA1-213ENST00000560856 A0A087X0K7 114 aa11.15□□□□□ -0.62
SNRPA1-213ENST00000560856 CA1P00915 261 aaPredicted RBP11.15□□□□□ -0.62
SNRPA1-213ENST00000560856 HLA-DRB4P13762 266 aa11.15□□□□□ -0.62
SNRPA1-213ENST00000560856 RPL7P18124 248 aaKnown RBP11.15□□□□□ -0.62
SNRPA1-213ENST00000560856 C4BPBP20851 252 aa11.15□□□□□ -0.62
SNRPA1-213ENST00000560856 FGF7P21781 194 aa11.15□□□□□ -0.62
SNRPA1-213ENST00000560856 ID1P41134 155 aa11.15□□□□□ -0.62
SNRPA1-213ENST00000560856 RGS21Q2M5E4 152 aa11.15□□□□□ -0.62
SNRPA1-213ENST00000560856 LINC00305Q7Z4B0 112 aa11.15□□□□□ -0.62
SNRPA1-213ENST00000560856 LINC00052Q96N35 136 aa11.15□□□□□ -0.62
SNRPA1-213ENST00000560856 MED28Q9H204 178 aa11.15□□□□□ -0.62
SNRPA1-213ENST00000560856 DNAJC4Q9NNZ3 241 aa11.15□□□□□ -0.62
SNRPA1-213ENST00000560856 SLC39A9Q9NUM3 307 aa11.15□□□□□ -0.62
SNRPA1-213ENST00000560856 HSPB11Q9Y547 144 aa11.15□□□□□ -0.62
SNRPA1-213ENST00000560856 HLA-DRB4X5D2U9 266 aa11.15□□□□□ -0.62
SNRPA1-213ENST00000560856 CSMD3Q7Z407 3707 aa11.15□□□□□ -0.62
SNRPA1-213ENST00000560856 KMT2CQ8NEZ4 4911 aaKnown RBP11.15□□□□□ -0.62
SNRPA1-213ENST00000560856 STARD9Q9P2P6 4700 aa11.15□□□□□ -0.62
SNRPA1-213ENST00000560856 ELOA3CA0A087WX78 387 aaPredicted RBP11.14□□□□□ -0.63
SNRPA1-213ENST00000560856 COX7A2P2O60397 106 aa11.14□□□□□ -0.63
SNRPA1-213ENST00000560856 MPDU1O75352 247 aa11.14□□□□□ -0.63
SNRPA1-213ENST00000560856 SPP1P10451 314 aa11.14□□□□□ -0.63
SNRPA1-213ENST00000560856 CLINT1Q14677 625 aa11.14□□□□□ -0.63
SNRPA1-213ENST00000560856 SAMD13Q5VXD3 122 aa11.14□□□□□ -0.63
SNRPA1-213ENST00000560856 IGFL4Q6B9Z1 124 aa11.14□□□□□ -0.63
SNRPA1-213ENST00000560856 MORN3Q6PF18 240 aaPredicted RBP11.14□□□□□ -0.63
SNRPA1-213ENST00000560856 THAP6Q8TBB0 222 aa11.14□□□□□ -0.63
SNRPA1-213ENST00000560856 GATAD1Q8WUU5 269 aa11.14□□□□□ -0.63
SNRPA1-213ENST00000560856 NPCDR1Q9BY65 106 aa11.14□□□□□ -0.63
SNRPA1-213ENST00000560856 SAV1Q9H4B6 383 aaPredicted RBP11.14□□□□□ -0.63
SNRPA1-213ENST00000560856 PXMP4Q9Y6I8 212 aa11.14□□□□□ -0.63
SNRPA1-213ENST00000560856 PET100P0DJ07 73 aa11.13□□□□□ -0.63
SNRPA1-213ENST00000560856 RPL12P30050 165 aaKnown RBP11.13□□□□□ -0.63
SNRPA1-213ENST00000560856 B2MP61769 119 aa11.13□□□□□ -0.63
SNRPA1-213ENST00000560856 C10orf113Q5VZT2 155 aa11.13□□□□□ -0.63
SNRPA1-213ENST00000560856 FOXI2Q6ZQN5 318 aa11.13□□□□□ -0.63
SNRPA1-213ENST00000560856 Q6ZRG5 221 aa11.13□□□□□ -0.63
SNRPA1-213ENST00000560856 S100A7AQ86SG5 101 aa11.13□□□□□ -0.63
SNRPA1-213ENST00000560856 CSNK1G2-AS1Q8NCQ2 148 aa11.13□□□□□ -0.63
SNRPA1-213ENST00000560856 C16orf92Q96LL3 132 aa11.13□□□□□ -0.63
SNRPA1-213ENST00000560856 CLUHP3Q96NS8 147 aa11.13□□□□□ -0.63
SNRPA1-213ENST00000560856 WDR61Q9GZS3 305 aaKnown RBP11.13□□□□□ -0.63
SNRPA1-213ENST00000560856 TRAV5A0A0B4J249 113 aa11.12□□□□□ -0.63
SNRPA1-213ENST00000560856 A8MTW9 85 aa11.12□□□□□ -0.63
SNRPA1-213ENST00000560856 F6UB75 175 aa11.12□□□□□ -0.63
SNRPA1-213ENST00000560856 Q5BKY6 102 aa11.12□□□□□ -0.63
SNRPA1-213ENST00000560856 CASC10Q5T4H9 136 aa11.12□□□□□ -0.63
SNRPA1-213ENST00000560856 OR1L4Q8NGR5 311 aa11.12□□□□□ -0.63
SNRPA1-213ENST00000560856 WFDC1Q9HC57 220 aa11.12□□□□□ -0.63
SNRPA1-213ENST00000560856 DYNC2H1Q8NCM8 4307 aaKnown RBP11.11□□□□□ -0.63
SNRPA1-213ENST00000560856 A0A0J9YWU9 116 aa11.11□□□□□ -0.63
SNRPA1-213ENST00000560856 A0A0J9YX75 114 aa11.11□□□□□ -0.63
SNRPA1-213ENST00000560856 ATF4P18848 351 aaPredicted RBP11.11□□□□□ -0.63
SNRPA1-213ENST00000560856 TMEM41BQ5BJD5 291 aa11.11□□□□□ -0.63
SNRPA1-213ENST00000560856 GCSAMLQ5JQS6 135 aa11.11□□□□□ -0.63
SNRPA1-213ENST00000560856 OR11H2Q8NH07 326 aa11.11□□□□□ -0.63
SNRPA1-213ENST00000560856 ATP5SQ99766 215 aa11.11□□□□□ -0.63
SNRPA1-213ENST00000560856 RARRES2Q99969 163 aa11.11□□□□□ -0.63
SNRPA1-213ENST00000560856 RNF24Q9Y225 148 aa11.11□□□□□ -0.63
SNRPA1-213ENST00000560856 H3BQ15 152 aa11.1□□□□□ -0.63
SNRPA1-213ENST00000560856 GIPP09681 153 aaPredicted RBP11.1□□□□□ -0.63
SNRPA1-213ENST00000560856 IGLC2P0DOY2 106 aa11.1□□□□□ -0.63
SNRPA1-213ENST00000560856 HLA-DMBP28068 263 aa11.1□□□□□ -0.63
SNRPA1-213ENST00000560856 FGL1Q08830 312 aa11.1□□□□□ -0.63
SNRPA1-213ENST00000560856 SPATA31B1PQ5VZV4 182 aa11.1□□□□□ -0.63
SNRPA1-213ENST00000560856 BPIFA4PQ86YQ2 179 aa11.1□□□□□ -0.63
SNRPA1-213ENST00000560856 RNF182Q8N6D2 247 aa11.1□□□□□ -0.63
SNRPA1-213ENST00000560856 PFDN5Q99471 154 aa11.1□□□□□ -0.63
SNRPA1-213ENST00000560856 RPRMQ9NS64 109 aa11.1□□□□□ -0.63
SNRPA1-213ENST00000560856 ZNF705EA8MWA4 302 aaPredicted RBP11.09□□□□□ -0.63
SNRPA1-213ENST00000560856 SNRPCP09234 159 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms