RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 FAM213BQ8TBF2 198 aa7.15□□□□□ -1.26
TPM1-225ENST00000560679 C20orf24Q9BUV8 137 aa7.15□□□□□ -1.26
TPM1-225ENST00000560679 PARD6GQ9BYG4 376 aaPredicted RBP7.15□□□□□ -1.26
TPM1-225ENST00000560679 CARHSP1Q9Y2V2 147 aaKnown RBP7.15□□□□□ -1.26
TPM1-225ENST00000560679 PRELID3BQ9Y3B1 194 aa7.15□□□□□ -1.26
TPM1-225ENST00000560679 IGKV3-7A0A075B6H7 116 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 MARCH11A6NNE9 402 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 CHEK1O14757 476 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 HPRT1P00492 218 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 CD5P06127 495 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 METTL15P1P0C7V9 234 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 P0DMU3 169 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 FAM231AP0DMU4 169 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 FAM231CP0DMU5 169 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 ERVK-16P61578 105 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 SRSF3P84103 164 aaKnown RBP7.14□□□□□ -1.27
TPM1-225ENST00000560679 SLC38A11Q08AI6 406 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 AARDQ4LEZ3 155 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 C10orf91Q5T1B1 145 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 FAM90A2PQ658T7 463 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 SLC25A24Q6NUK1 477 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 TMEM14EPQ6UXP3 125 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 DPPA3Q6W0C5 159 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 Q8N1X5 172 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 VN1R17PQ8TDU5 208 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 CIB3Q96Q77 187 aaPredicted RBP7.14□□□□□ -1.27
TPM1-225ENST00000560679 TMEM231Q9H6L2 316 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 UQCC1Q9NVA1 299 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 SMPXQ9UHP9 88 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 TMA7Q9Y2S6 64 aaKnown RBP7.14□□□□□ -1.27
TPM1-225ENST00000560679 X6R8D5 127 aa7.14□□□□□ -1.27
TPM1-225ENST00000560679 MYCBP2O75592 4640 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 FAT1Q14517 4588 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 IGHV3-49A0A0A0MS15 119 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 IGHV3-21A0A0B4J1V1 117 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 TRAV3A0A0B4J244 114 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 IGHV7-4-1A0A0J9YVY3 117 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 C15orf62A8K5M9 175 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 CEBPZOSA8MTT3 80 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 F8W036 122 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 K7EMT4 169 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 NQO2P16083 231 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 ADCYAP1P18509 176 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 AKR1C1Q04828 323 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 ARL16Q0P5N6 197 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 ATP6V1FQ16864 119 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 C12orf74Q32Q52 190 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 SPANXN5Q5MJ07 72 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 AKR1C8PQ5T2L2 129 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 LEMD1Q68G75 181 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 SVBPQ8N300 66 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 LILRB2Q8N423 598 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 GBGT1Q8N5D6 347 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 FAM24BQ8N5W8 94 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 OR10W1Q8NGF6 305 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 SCGB1C1Q8TD33 95 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 DTD1Q8TEA8 209 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 PSMG3Q9BT73 122 aaPredicted RBP7.13□□□□□ -1.27
TPM1-225ENST00000560679 RHPN1-AS1Q9BWJ2 59 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 SEC11CQ9BY50 192 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 VPS13BQ7Z7G8 4022 aa7.13□□□□□ -1.27
TPM1-225ENST00000560679 NACAE9PAV3 2078 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 AGRNO00468 2067 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 DEFB131BA0A096LNP1 70 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 C16orf90A8MZG2 172 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 AGPAT2O15120 278 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 SFTA3P0C7M3 94 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 MIFP14174 115 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 SNCAP37840 140 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 FHITP49789 147 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 PEA15Q15121 130 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 GUK1Q16774 197 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 SPSB3Q6PJ21 355 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 ATRAIDQ6UW56 229 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 OR52E5Q8NH55 327 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 NDUFAF3Q9BU61 184 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 PBDC1Q9BVG4 233 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 TMEM147Q9BVK8 224 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 QTRT1Q9BXR0 403 aaKnown RBP7.12□□□□□ -1.27
TPM1-225ENST00000560679 NKX6-2Q9C056 277 aaPredicted RBP7.12□□□□□ -1.27
TPM1-225ENST00000560679 BET1LQ9NYM9 111 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 RFNGQ9Y644 331 aa7.12□□□□□ -1.27
TPM1-225ENST00000560679 K7EIM0 57 aa7.11□□□□□ -1.27
TPM1-225ENST00000560679 HBE1P02100 147 aa7.11□□□□□ -1.27
TPM1-225ENST00000560679 H2AFB1P0C5Y9 115 aa7.11□□□□□ -1.27
TPM1-225ENST00000560679 CMC4P56277 68 aaPredicted RBP7.11□□□□□ -1.27
TPM1-225ENST00000560679 DEFB131AP59861 70 aa7.11□□□□□ -1.27
TPM1-225ENST00000560679 SPCS3P61009 180 aa7.11□□□□□ -1.27
TPM1-225ENST00000560679 TNP2Q05952 138 aa7.11□□□□□ -1.27
TPM1-225ENST00000560679 WT1-ASQ06250 92 aa7.11□□□□□ -1.27
TPM1-225ENST00000560679 BTN1A1Q13410 526 aa7.11□□□□□ -1.27
TPM1-225ENST00000560679 POU2AF1Q16633 256 aa7.11□□□□□ -1.27
TPM1-225ENST00000560679 OR8G2PQ6IF36 304 aa7.11□□□□□ -1.27
TPM1-225ENST00000560679 TRPT1Q86TN4 253 aaKnown RBP7.11□□□□□ -1.27
TPM1-225ENST00000560679 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.11□□□□□ -1.27
TPM1-225ENST00000560679 TMEM116Q8NCL8 245 aa7.11□□□□□ -1.27
TPM1-225ENST00000560679 OR4A16Q8NH70 328 aa7.11□□□□□ -1.27
TPM1-225ENST00000560679 PINX1Q96BK5 328 aaKnown RBP7.11□□□□□ -1.27
TPM1-225ENST00000560679 SRSF8Q9BRL6 282 aaKnown RBP7.11□□□□□ -1.27
TPM1-225ENST00000560679 WDR61Q9GZS3 305 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms