RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 SLC25A21Q9BQT8 299 aaPredicted RBP12.44□□□□□ -0.42
TSPAN3-208ENST00000560514 RBKSQ9H477 322 aa12.44□□□□□ -0.42
TSPAN3-208ENST00000560514 DOK5Q9P104 306 aa12.44□□□□□ -0.42
TSPAN3-208ENST00000560514 PITX3O75364 302 aa12.43□□□□□ -0.42
TSPAN3-208ENST00000560514 INSP01308 110 aa12.43□□□□□ -0.42
TSPAN3-208ENST00000560514 FABP1P07148 127 aa12.43□□□□□ -0.42
TSPAN3-208ENST00000560514 C1orf194Q5T5A4 169 aa12.43□□□□□ -0.42
TSPAN3-208ENST00000560514 C16orf92Q96LL3 132 aa12.43□□□□□ -0.42
TSPAN3-208ENST00000560514 CBY3A6NI87 242 aa12.42□□□□□ -0.42
TSPAN3-208ENST00000560514 SOCS3O14543 225 aa12.42□□□□□ -0.42
TSPAN3-208ENST00000560514 FCN2Q15485 313 aa12.42□□□□□ -0.42
TSPAN3-208ENST00000560514 Q5VSD8 79 aa12.42□□□□□ -0.42
TSPAN3-208ENST00000560514 OR8I2Q8N0Y5 310 aa12.42□□□□□ -0.42
TSPAN3-208ENST00000560514 TOMM5Q8N4H5 51 aa12.42□□□□□ -0.42
TSPAN3-208ENST00000560514 Q9H3A6 140 aa12.42□□□□□ -0.42
TSPAN3-208ENST00000560514 A0A1W2PPQ1 181 aa12.41□□□□□ -0.42
TSPAN3-208ENST00000560514 ZFP92A6NM28 416 aa12.41□□□□□ -0.42
TSPAN3-208ENST00000560514 SNRPGP15A8MWD9 76 aa12.41□□□□□ -0.42
TSPAN3-208ENST00000560514 PRM2P04554 102 aa12.41□□□□□ -0.42
TSPAN3-208ENST00000560514 TSPOP30536 169 aa12.41□□□□□ -0.42
TSPAN3-208ENST00000560514 MEOX2P50222 304 aa12.41□□□□□ -0.42
TSPAN3-208ENST00000560514 RAB11AP62491 216 aa12.41□□□□□ -0.42
TSPAN3-208ENST00000560514 GAMTQ14353 236 aa12.41□□□□□ -0.42
TSPAN3-208ENST00000560514 LYPD1Q8N2G4 141 aa12.41□□□□□ -0.42
TSPAN3-208ENST00000560514 OR1S1Q8NH92 325 aa12.41□□□□□ -0.42
TSPAN3-208ENST00000560514 PRR13Q9NZ81 148 aa12.41□□□□□ -0.42
TSPAN3-208ENST00000560514 EREGO14944 169 aa12.4□□□□□ -0.42
TSPAN3-208ENST00000560514 MED6O75586 246 aa12.4□□□□□ -0.42
TSPAN3-208ENST00000560514 CFDP00746 253 aaPredicted RBP12.4□□□□□ -0.42
TSPAN3-208ENST00000560514 S100A5P33763 92 aa12.4□□□□□ -0.42
TSPAN3-208ENST00000560514 LYZP61626 148 aa12.4□□□□□ -0.42
TSPAN3-208ENST00000560514 RPP30P78346 268 aaKnown RBP12.4□□□□□ -0.42
TSPAN3-208ENST00000560514 SPINK13Q1W4C9 94 aa12.4□□□□□ -0.42
TSPAN3-208ENST00000560514 PYDC2Q56P42 97 aa12.4□□□□□ -0.42
TSPAN3-208ENST00000560514 TRIM63Q969Q1 353 aa12.4□□□□□ -0.42
TSPAN3-208ENST00000560514 SLC35E1Q96K37 410 aa12.4□□□□□ -0.42
TSPAN3-208ENST00000560514 CIB3Q96Q77 187 aaPredicted RBP12.4□□□□□ -0.42
TSPAN3-208ENST00000560514 PGPEP1Q9NXJ5 209 aa12.4□□□□□ -0.42
TSPAN3-208ENST00000560514 M0R2Z0 102 aa12.39□□□□□ -0.43
TSPAN3-208ENST00000560514 DUSP14O95147 198 aaKnown RBP12.39□□□□□ -0.43
TSPAN3-208ENST00000560514 GNPNAT1Q96EK6 184 aaPredicted RBP12.39□□□□□ -0.43
TSPAN3-208ENST00000560514 KRTAP1-5Q9BYS1 174 aa12.39□□□□□ -0.43
TSPAN3-208ENST00000560514 IGKV1D-37A0A075B6S9 117 aa12.38□□□□□ -0.43
TSPAN3-208ENST00000560514 GALR1P47211 349 aa12.38□□□□□ -0.43
TSPAN3-208ENST00000560514 OR5I1Q13606 314 aa12.38□□□□□ -0.43
TSPAN3-208ENST00000560514 AMTNQ6UX39 209 aa12.38□□□□□ -0.43
TSPAN3-208ENST00000560514 UHRF2Q96PU4 802 aa12.38□□□□□ -0.43
TSPAN3-208ENST00000560514 TRGV9Q99603 122 aa12.38□□□□□ -0.43
TSPAN3-208ENST00000560514 V9GYH0 126 aa12.38□□□□□ -0.43
TSPAN3-208ENST00000560514 CNN1P51911 297 aaKnown RBP12.37□□□□□ -0.43
TSPAN3-208ENST00000560514 UBE2MP61081 183 aaKnown RBP12.37□□□□□ -0.43
TSPAN3-208ENST00000560514 GGNBP1Q5YKI7 109 aa12.37□□□□□ -0.43
TSPAN3-208ENST00000560514 TMED4Q7Z7H5 227 aa12.37□□□□□ -0.43
TSPAN3-208ENST00000560514 OR11H7Q8NGC8 314 aa12.37□□□□□ -0.43
TSPAN3-208ENST00000560514 C20orf173Q96LM9 149 aa12.37□□□□□ -0.43
TSPAN3-208ENST00000560514 C18orf15Q96N68 181 aa12.37□□□□□ -0.43
TSPAN3-208ENST00000560514 LINC01587Q99440 93 aa12.37□□□□□ -0.43
TSPAN3-208ENST00000560514 ZNF586Q9NXT0 402 aa12.37□□□□□ -0.43
TSPAN3-208ENST00000560514 TIMM8BQ9Y5J9 83 aaPredicted RBP12.37□□□□□ -0.43
TSPAN3-208ENST00000560514 A8MTW9 85 aa12.36□□□□□ -0.43
TSPAN3-208ENST00000560514 SFT2D2O95562 160 aa12.36□□□□□ -0.43
TSPAN3-208ENST00000560514 HTN1P15515 57 aa12.36□□□□□ -0.43
TSPAN3-208ENST00000560514 AZU1P20160 251 aa12.36□□□□□ -0.43
TSPAN3-208ENST00000560514 ZNF90Q03938 601 aa12.36□□□□□ -0.43
TSPAN3-208ENST00000560514 CCDC190Q86UF4 302 aa12.36□□□□□ -0.43
TSPAN3-208ENST00000560514 BAP18Q8IXM2 172 aa12.36□□□□□ -0.43
TSPAN3-208ENST00000560514 THAP8Q8NA92 274 aa12.36□□□□□ -0.43
TSPAN3-208ENST00000560514 OR10J6PQ8NGY7 276 aa12.36□□□□□ -0.43
TSPAN3-208ENST00000560514 UPK3BQ9BT76 320 aa12.36□□□□□ -0.43
TSPAN3-208ENST00000560514 PPP1R14DQ9NXH3 145 aa12.36□□□□□ -0.43
TSPAN3-208ENST00000560514 SLC45A2Q9UMX9 530 aa12.36□□□□□ -0.43
TSPAN3-208ENST00000560514 TRAV26-1A0A087WT03 109 aa12.35□□□□□ -0.43
TSPAN3-208ENST00000560514 ZNF701M0R085 212 aaPredicted RBP12.35□□□□□ -0.43
TSPAN3-208ENST00000560514 CRXO43186 299 aaPredicted RBP12.35□□□□□ -0.43
TSPAN3-208ENST00000560514 SYNGR2O43760 224 aa12.35□□□□□ -0.43
TSPAN3-208ENST00000560514 VAMP1P23763 118 aa12.35□□□□□ -0.43
TSPAN3-208ENST00000560514 S100A7P31151 101 aa12.35□□□□□ -0.43
TSPAN3-208ENST00000560514 CDPF1Q6NVV7 123 aa12.35□□□□□ -0.43
TSPAN3-208ENST00000560514 TMEM256Q8N2U0 113 aa12.35□□□□□ -0.43
TSPAN3-208ENST00000560514 C16orf74Q96GX8 76 aa12.35□□□□□ -0.43
TSPAN3-208ENST00000560514 PLAC8L1A1L4L8 177 aa12.34□□□□□ -0.43
TSPAN3-208ENST00000560514 ADAP1O75689 374 aa12.34□□□□□ -0.43
TSPAN3-208ENST00000560514 IFNA5P01569 189 aa12.34□□□□□ -0.43
TSPAN3-208ENST00000560514 M6PRP20645 277 aa12.34□□□□□ -0.43
TSPAN3-208ENST00000560514 XGP55808 180 aa12.34□□□□□ -0.43
TSPAN3-208ENST00000560514 OR2F1Q13607 317 aa12.34□□□□□ -0.43
TSPAN3-208ENST00000560514 RXFP4Q8TDU9 374 aa12.34□□□□□ -0.43
TSPAN3-208ENST00000560514 ZNF503Q96F45 646 aa12.34□□□□□ -0.43
TSPAN3-208ENST00000560514 RSG1Q9BU20 258 aa12.34□□□□□ -0.43
TSPAN3-208ENST00000560514 SLC25A22Q9H936 323 aa12.34□□□□□ -0.43
TSPAN3-208ENST00000560514 FLG2Q5D862 2391 aaPredicted RBP12.34□□□□□ -0.43
TSPAN3-208ENST00000560514 TRAV12-2A0A075B6T6 113 aa12.33□□□□□ -0.44
TSPAN3-208ENST00000560514 A0A0J9YY99 117 aa12.33□□□□□ -0.44
TSPAN3-208ENST00000560514 NAP1L6A6NFF2 107 aa12.33□□□□□ -0.44
TSPAN3-208ENST00000560514 J3QL48 77 aa12.33□□□□□ -0.44
TSPAN3-208ENST00000560514 LINC00315P59091 139 aa12.33□□□□□ -0.44
TSPAN3-208ENST00000560514 TAS2R60P59551 318 aa12.33□□□□□ -0.44
TSPAN3-208ENST00000560514 ERVFC1-1P60608 527 aa12.33□□□□□ -0.44
TSPAN3-208ENST00000560514 ID3Q02535 119 aa12.33□□□□□ -0.44
TSPAN3-208ENST00000560514 PPP1R1AQ13522 171 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms