RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 SBSPONQ8IVN8 264 aa11.52□□□□□ -0.57
LYSMD2-204ENST00000560491 TNFSF18Q9UNG2 199 aa11.52□□□□□ -0.57
LYSMD2-204ENST00000560491 IFNA5P01569 189 aa11.51□□□□□ -0.57
LYSMD2-204ENST00000560491 ZNF688P0C7X2 276 aa11.51□□□□□ -0.57
LYSMD2-204ENST00000560491 S100A7P31151 101 aa11.51□□□□□ -0.57
LYSMD2-204ENST00000560491 DEFB131AP59861 70 aa11.51□□□□□ -0.57
LYSMD2-204ENST00000560491 GCSAMLQ5JQS6 135 aa11.51□□□□□ -0.57
LYSMD2-204ENST00000560491 RSG1Q9BU20 258 aa11.51□□□□□ -0.57
LYSMD2-204ENST00000560491 hCG_2014768A0A024R1R8 64 aa11.5□□□□□ -0.57
LYSMD2-204ENST00000560491 ELOA3CA0A087WX78 387 aaPredicted RBP11.5□□□□□ -0.57
LYSMD2-204ENST00000560491 GALR1P47211 349 aa11.5□□□□□ -0.57
LYSMD2-204ENST00000560491 LINC00322Q6ZN03 302 aaPredicted RBP11.5□□□□□ -0.57
LYSMD2-204ENST00000560491 ZNF709Q8N972 641 aa11.5□□□□□ -0.57
LYSMD2-204ENST00000560491 INO80EQ8NBZ0 244 aaPredicted RBP11.5□□□□□ -0.57
LYSMD2-204ENST00000560491 OR1L4Q8NGR5 311 aa11.5□□□□□ -0.57
LYSMD2-204ENST00000560491 SCGB1C1Q8TD33 95 aa11.5□□□□□ -0.57
LYSMD2-204ENST00000560491 C17orf77Q96MU5 243 aa11.5□□□□□ -0.57
LYSMD2-204ENST00000560491 FAM110AQ9BQ89 295 aa11.5□□□□□ -0.57
LYSMD2-204ENST00000560491 DNAJC4Q9NNZ3 241 aa11.5□□□□□ -0.57
LYSMD2-204ENST00000560491 RFNGQ9Y644 331 aa11.5□□□□□ -0.57
LYSMD2-204ENST00000560491 ARPC5O15511 151 aa11.49□□□□□ -0.57
LYSMD2-204ENST00000560491 GPR82Q96P67 336 aa11.49□□□□□ -0.57
LYSMD2-204ENST00000560491 PFDN5Q99471 154 aa11.49□□□□□ -0.57
LYSMD2-204ENST00000560491 TGP01266 2768 aa11.48□□□□□ -0.57
LYSMD2-204ENST00000560491 COL7A1Q02388 2944 aa11.48□□□□□ -0.57
LYSMD2-204ENST00000560491 TRAV5A0A0B4J249 113 aa11.48□□□□□ -0.57
LYSMD2-204ENST00000560491 C17orf112F2Z3M2 114 aa11.48□□□□□ -0.57
LYSMD2-204ENST00000560491 SOCS3O14543 225 aa11.48□□□□□ -0.57
LYSMD2-204ENST00000560491 RPL7P18124 248 aaKnown RBP11.48□□□□□ -0.57
LYSMD2-204ENST00000560491 CMC4P56277 68 aaPredicted RBP11.48□□□□□ -0.57
LYSMD2-204ENST00000560491 HAGHQ16775 308 aa11.48□□□□□ -0.57
LYSMD2-204ENST00000560491 PSMG4Q5JS54 123 aa11.48□□□□□ -0.57
LYSMD2-204ENST00000560491 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.48□□□□□ -0.57
LYSMD2-204ENST00000560491 S100A7AQ86SG5 101 aa11.48□□□□□ -0.57
LYSMD2-204ENST00000560491 PARD6GQ9BYG4 376 aaPredicted RBP11.48□□□□□ -0.57
LYSMD2-204ENST00000560491 KCNIP2Q9NS61 270 aa11.48□□□□□ -0.57
LYSMD2-204ENST00000560491 PLA2G2EQ9NZK7 142 aa11.48□□□□□ -0.57
LYSMD2-204ENST00000560491 LOC102724200A0A096LPH7 203 aaPredicted RBP11.47□□□□□ -0.57
LYSMD2-204ENST00000560491 MRPS12O15235 138 aaKnown RBP11.47□□□□□ -0.57
LYSMD2-204ENST00000560491 SNRPCP09234 159 aaKnown RBP11.47□□□□□ -0.57
LYSMD2-204ENST00000560491 RPL35AP18077 110 aaKnown RBP11.47□□□□□ -0.57
LYSMD2-204ENST00000560491 ATF4P18848 351 aaPredicted RBP11.47□□□□□ -0.57
LYSMD2-204ENST00000560491 OR11H4Q8NGC9 324 aa11.47□□□□□ -0.57
LYSMD2-204ENST00000560491 GATAD1Q8WUU5 269 aa11.47□□□□□ -0.57
LYSMD2-204ENST00000560491 ST6GAL2Q96JF0 529 aa11.47□□□□□ -0.57
LYSMD2-204ENST00000560491 KNCNA6PVL3 124 aa11.46□□□□□ -0.57
LYSMD2-204ENST00000560491 DEFB1P60022 68 aa11.46□□□□□ -0.57
LYSMD2-204ENST00000560491 SNRPD3P62318 126 aaKnown RBP11.46□□□□□ -0.57
LYSMD2-204ENST00000560491 ZNF266Q14584 549 aa11.46□□□□□ -0.57
LYSMD2-204ENST00000560491 FFAR4Q5NUL3 377 aa11.46□□□□□ -0.57
LYSMD2-204ENST00000560491 SPATA31B1PQ5VZV4 182 aa11.46□□□□□ -0.57
LYSMD2-204ENST00000560491 HSD17B11Q8NBQ5 300 aa11.46□□□□□ -0.57
LYSMD2-204ENST00000560491 LINC00052Q96N35 136 aa11.46□□□□□ -0.57
LYSMD2-204ENST00000560491 AGRNO00468 2067 aa11.46□□□□□ -0.57
LYSMD2-204ENST00000560491 ID1P41134 155 aa11.45□□□□□ -0.58
LYSMD2-204ENST00000560491 PSMB3P49720 205 aa11.45□□□□□ -0.58
LYSMD2-204ENST00000560491 MEOX2P50222 304 aa11.45□□□□□ -0.58
LYSMD2-204ENST00000560491 FAM78BQ5VT40 261 aa11.45□□□□□ -0.58
LYSMD2-204ENST00000560491 IGFL4Q6B9Z1 124 aa11.45□□□□□ -0.58
LYSMD2-204ENST00000560491 RPL7L1Q6DKI1 246 aaKnown RBP11.45□□□□□ -0.58
LYSMD2-204ENST00000560491 MIR17HGQ75NE6 70 aa11.45□□□□□ -0.58
LYSMD2-204ENST00000560491 C16orf92Q96LL3 132 aa11.45□□□□□ -0.58
LYSMD2-204ENST00000560491 C20orf173Q96LM9 149 aa11.45□□□□□ -0.58
LYSMD2-204ENST00000560491 MFFQ9GZY8 342 aa11.45□□□□□ -0.58
LYSMD2-204ENST00000560491 SEPSECSQ9HD40 501 aaKnown RBP11.45□□□□□ -0.58
LYSMD2-204ENST00000560491 RNF24Q9Y225 148 aa11.45□□□□□ -0.58
LYSMD2-204ENST00000560491 A0A087X0K7 114 aa11.44□□□□□ -0.58
LYSMD2-204ENST00000560491 TRAV8-2A0A0B4J237 113 aa11.44□□□□□ -0.58
LYSMD2-204ENST00000560491 A0A1B0GVG6 124 aa11.44□□□□□ -0.58
LYSMD2-204ENST00000560491 H3BTX0 84 aa11.44□□□□□ -0.58
LYSMD2-204ENST00000560491 ISLRO14498 428 aa11.44□□□□□ -0.58
LYSMD2-204ENST00000560491 BPIFA4PQ86YQ2 179 aa11.44□□□□□ -0.58
LYSMD2-204ENST00000560491 TM2D3Q9BRN9 247 aa11.44□□□□□ -0.58
LYSMD2-204ENST00000560491 RETNQ9HD89 108 aa11.44□□□□□ -0.58
LYSMD2-204ENST00000560491 TIMM9Q9Y5J7 89 aa11.44□□□□□ -0.58
LYSMD2-204ENST00000560491 EIF3GO75821 320 aaKnown RBP eCLIP11.43□□□□□ -0.58
LYSMD2-204ENST00000560491 NHLRC4P0CG21 123 aaPredicted RBP11.43□□□□□ -0.58
LYSMD2-204ENST00000560491 IGLC2P0DOY2 106 aa11.43□□□□□ -0.58
LYSMD2-204ENST00000560491 ATP6V0CP27449 155 aa11.43□□□□□ -0.58
LYSMD2-204ENST00000560491 HLA-DMBP28068 263 aa11.43□□□□□ -0.58
LYSMD2-204ENST00000560491 ACTL10Q5JWF8 245 aa11.43□□□□□ -0.58
LYSMD2-204ENST00000560491 GDF5OSQ5U4N7 250 aa11.43□□□□□ -0.58
LYSMD2-204ENST00000560491 STHQ8IWL8 128 aa11.43□□□□□ -0.58
LYSMD2-204ENST00000560491 RNF182Q8N6D2 247 aa11.43□□□□□ -0.58
LYSMD2-204ENST00000560491 SLC25A2Q9BXI2 301 aa11.43□□□□□ -0.58
LYSMD2-204ENST00000560491 SH3BGRL3Q9H299 93 aa11.43□□□□□ -0.58
LYSMD2-204ENST00000560491 HMSDA8MTL9 139 aa11.42□□□□□ -0.58
LYSMD2-204ENST00000560491 H3BQ15 152 aa11.42□□□□□ -0.58
LYSMD2-204ENST00000560491 SLC17A3O00476 420 aa11.42□□□□□ -0.58
LYSMD2-204ENST00000560491 PYYP10082 97 aa11.42□□□□□ -0.58
LYSMD2-204ENST00000560491 RAB2AP61019 212 aa11.42□□□□□ -0.58
LYSMD2-204ENST00000560491 SAMD13Q5VXD3 122 aa11.42□□□□□ -0.58
LYSMD2-204ENST00000560491 TRPT1Q86TN4 253 aaKnown RBP11.42□□□□□ -0.58
LYSMD2-204ENST00000560491 TCTE3Q8IZS6 198 aa11.42□□□□□ -0.58
LYSMD2-204ENST00000560491 FAM167A-AS1Q96KT0 104 aa11.42□□□□□ -0.58
LYSMD2-204ENST00000560491 MRPL32Q9BYC8 188 aaKnown RBP11.42□□□□□ -0.58
LYSMD2-204ENST00000560491 FUT9Q9Y231 359 aa11.42□□□□□ -0.58
LYSMD2-204ENST00000560491 BORCS7-ASMTA0A0B4J1R7 106 aa11.41□□□□□ -0.58
LYSMD2-204ENST00000560491 F6UB75 175 aa11.41□□□□□ -0.58
LYSMD2-204ENST00000560491 PRB4P10163 310 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms